Etheostoma cragini (Arkansas darter): 117934922
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Entry
117934922 CDS
T07493
Symbol
ntn5
Name
(RefSeq) netrin-1 isoform X1
KO
K06843
netrin 1
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
ecra00536
]
117934922 (ntn5)
Glycosaminoglycan binding proteins [BR:
ecra00536
]
Heparan sulfate / Heparin
Axon guidance molecules
117934922 (ntn5)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Laminin_N
NTR
EGF_laminin
EGF_LMN_ATRN
Ribosomal_L19e
Motif
Other DBs
NCBI-GeneID:
117934922
NCBI-ProteinID:
XP_034712829
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All DBs
Position
19:complement(16098866..16114074)
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AA seq
835 aa
AA seq
DB search
MMFLYFSLPPSTFLFPISLLVLFFFPPSLISSSLSHTPLSWTSPHDPCYYLDGRPRHCLS
DFINAAYGVPANASHSLQGPDFDNITTLTDLHNPHNLTCWMAHKGLDAGEWVLTLPLGRR
FEITYISLQFCQQGEPSDPISISILKSMDFGRTWRSMQHYSSDCQGNFGLPSQTVAQARH
QETEPLCSDPRPLQKQRGGMVLAFSTLDGRPSSPDFDHSHTLQDWVTATDIRVVFHQVSI
DAKVGTLDKKEKARWWDGPVDDRGTGLLRWRSGSKGNTRDQVDKLITDNTLAFFESETKN
SEIRRKNKGEKVDKHRRKGNYKGSGQDEDGHNMTSKERGESYGTGTLASPKKGSKAKGPG
RKKENNDWPSCPNGGCNWTVEGRSRNNKGWELRKRRNNNPNTKQSSRNLQVAPHSAPLAL
SDLQVGGRCKCNGHASKCRRDDTGQAVCICEHHTAGPDCDVCEDFYCDRPWHRATPTHPN
PCVACECNGHSNKCRFSMEVFQQSGRRSGGVCQKCRHNTAGRHCQYCQNGYTRDRSKPQN
HRKACQPCQCHPLGAVGHWCNQTSGQCLCREGVTGLRCNRCAPGYKQGKSPLRPCIRIQE
VAPTPMYQPQYSIAEECVSYCQPSQVKVRMNLETYCLKDFVLKVQVREMERSGPWWQFSI
LVQTVFRTGSNSRIRRGSQSLWVPDRDLGCGCPALQVGRTFLLIGAEEGERGWGPEERRL
VADRSTLALQWREHWSPKLRGFRGQDKRGRCPPKSPYNNQHPHHRKPQSGYIPPHLLHEK
HTEPHSVDTHSLKMEDTQTLVAPHTHSHTETEVKATEVTPLPTSPALVCSSQTPG
NT seq
2508 nt
NT seq
+upstream
nt +downstream
nt
atgatgttcctgtacttttcccttcccccgtccacctttcttttccccatttcccttcta
gtcctctttttctttcctccatccctcatctcctcttccctttcccacaccccattgagc
tggacatcacctcatgacccctgctactacctggacggccgcccgcgacactgcctgtcg
gactttattaacgcggcctatggcgtcccagccaatgctagccactcgctacaagggcct
gattttgacaacatcaccaccttgacggacctgcacaaccctcacaacctcacatgctgg
atggctcacaaaggtcttgatgccggagaatgggtcctcacactacctctgggccgccgc
tttgagatcacctacataagtttgcagttttgccaacagggggaaccatcggacccaatc
tccatctccatactcaagtcgatggactttggacgcacctggaggtcgatgcagcattac
tccagcgactgccaaggaaactttgggctgccttcccagacagtggcccaggcaagacac
caagaaacagagcccctgtgctcagaccctcgccccctacaaaagcagaggggcggcatg
gtgttggccttctccacactggatggacgaccatcctctcctgattttgaccatagccac
accctccaggactgggtgacagccacggacatccgtgtggtctttcaccaggtgtccata
gatgccaaggtaggcaccttggacaagaaagagaaagcacgatggtgggatggtccagta
gatgacagagggactgggcttctgaggtggagatcaggctccaagggaaacaccagagat
caggtggacaagttaatcacagataatacactggctttttttgagagtgagacaaaaaac
tcagagataaggcggaagaacaaaggggagaaagtggacaaacatagaaggaagggtaat
tataaagggtcaggtcaagacgaagatggacacaatatgactagcaaagaaaggggtgaa
agttatggcacgggcacacttgcttccccaaaaaaaggcagtaaagccaaggggccgggc
cgcaagaaggaaaacaatgattggccctcttgcccaaatggaggttgtaattggacagtt
gaggggcggagcaggaacaacaaagggtgggaactgaggaagaggagaaacaataatccc
aatacaaaacaaagttcaaggaatttgcaggtggccccacactctgctcctcttgccctc
tcagatctgcaggttggcggcaggtgtaaatgtaacggacacgcttccaagtgtcgccgt
gatgacacaggtcaggcagtgtgcatatgtgagcatcacacggctgggccagactgtgat
gtgtgcgaggatttctactgcgacagaccgtggcatcgagctacacccacacacccaaac
ccctgtgttgcatgtgagtgcaacggccactcaaacaagtgccgcttcagcatggaggtg
tttcagcagtcgggccgacggagcggaggtgtgtgtcagaagtgtcgccacaacacggcc
ggacgtcactgccagtactgccagaacggatacacccgggaccgcagcaagccgcagaac
caccgcaaggcctgccaaccctgccagtgccatcctttgggagcagtgggtcactggtgt
aaccagacatcaggtcagtgcctgtgtcgagaaggggttaccggcctcaggtgtaaccgc
tgtgctccgggttacaaacagggcaagtcccctctgcggccctgcatacgaattcaagag
gttgctccaaccccaatgtatcaacctcagtacagcatagcggaggagtgtgtttcatac
tgccagccttctcaggttaaagtcagaatgaacttggagacctattgtctgaaggacttt
gtgttgaaggtgcaggtgagagagatggagcgttcaggtccctggtggcagttctccatc
ttagttcaaactgtcttccgcacggggtccaactcgcgcatccgcaggggctcccagtcc
ctctgggtccccgaccgggaccttggctgcggctgccctgccctccaagtgggtcggacc
ttccttctgattggtgcagaggaaggggagcggggctggggccctgaggagaggcggctg
gtggcagatcgctccactctggccctccagtggcgggaacactggagccccaagctgagg
ggcttccgtgggcaggacaagaggggccgttgccccccgaaatccccctacaataaccag
cacccccatcacagaaagccccagtctgggtacattccccctcacctgctacatgagaaa
cacaccgagcctcacagtgtggacacacactctctgaaaatggaggacactcaaacctta
gtggcaccacacacacactctcacacggagacagaggtaaaagccacagaggtgaccccc
ttgccaacttcacccgctctggtttgctcttctcaaactcctggttga
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