Etheostoma cragini (Arkansas darter): 117934977 Help Entry 117934977         CDS       T07493                                  Name (RefSeq) synaptopodin-2 isoform X1   KO K24066   synaptopodin-2 Organism ecra  Etheostoma cragini (Arkansas darter) Pathway ecra04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:ecra00001]  09140 Cellular Processes   09142 Cell motility    04820 Cytoskeleton in muscle cells     117934977  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04990 Domain-containing proteins not elsewhere classified [BR:ecra04990]     117934977 Domain-containing proteins not elsewhere classified [BR:ecra04990]  PDZ domain-containing proteins   Other PDZ domain-containing proteins    117934977 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  PDZ PDZ_6 Calsarcin Motif Other DBs NCBI-GeneID:  117934977 NCBI-ProteinID:  XP_034712894 LinkDB All DBs Position 19:complement(14395437..14413798) Genome browser AA seq 1592 aa AA seqDB search MGTGDYICATLRGGAPWGFTLREGEGDTYRPLLVSQVELGGRAFLAGVREGDEVVSLNGE PCAYLTLLRAFALIDTSIDCLQLLVKRYCTIPKEDYESDETYCGERDSSGEALESTTIHI FSPKQKSQSPRKLYISEFQDEASYGELDSNKEFPKGPQLLHPQLCVPPLGDRRGREPVFE ENDEEARRCFSPGDMVELQVSLSEQTLDDVGCTSLGSAHGIEGELSNKEAIETIHTTTAS HYVPCSVREPLGQRGVVLSSPLMLGQVEVILQQTAASGAGRGILSVGGPRVSGSVGSQSE GEEGEGHCEGVSGSSAVSFRTPSEEVTPAEEQDSESEGDPDKPNKHRARHARLRRSESLS EKQVKEAKSKCKRIALLLTAARSNPNNKGVLMFKKHRQRAKKYTLVSYGTGEDEPEYSDE EDEENEDNKQETHTVEFTLVAPNASEIDKHFLTNAHSSKGVLTINWDKGLLEIERNLNNQ AEMECLPDTKGKGAVMFAQRRQRMDEIAAEHEELRRQGIAVEGVQIADKKIEEHSYTQSR TEGHAYMDVNVHQQIQHQQQYQQYQEQQYYEQQQNYQQQQQQQQQQQQYQQQQQYEQQLY QQQQMYQKQQEYHQEQQQMQHYSANINGTVQHEMQSSLNNRTAKPFSVENMATSSYSPAM SGVNQDSVGQGEQIASRDERISTPASRTGLLSDCRRRNAGKPMFTFKEAPKISPNPALLN LLNRNDKKLGFESGPEEDYLSLGAEACNFLQSQRNKQKNPPPVAPKPVINPNSPPWFPPI EESNQDMPQQAENSVSTPAVAPTTETTLAPELKPNPAPVSEPSPPPAPQKAPASTATEEQ CPCTLPEPESQQQLLQVTAQENGHMNSILQPEPAPVTSWAQAQTHPQQESTNSWHPAQVQ PQEPPQSQSPPQPPWVTRHPTQIQAQPQPPTSNWTPQIQPSWSQHQEQAQAQTHAQPPWT MRQEQPQSHPQAQPPWTHSHEQPNLQQMQPTWGQLQEPMQQQPQAPWAQPSQTEHQNQPT WVQPLQKSQVQPPWAQQVQAESQPQPPWVQQPQHQAPQQAWPQAQAPGQPQTSWVTVQPQ QQPSNNAWPQSQTQVQPPWIQAAQAQPPAPPQAILNPWPPVPAQAQSQPSWAQHPSEHGQ TPINSWAQEQNPAQQQPPWAQPVPSQPTPQPNWQQSTSKTPPQPPMNAWPPPQAQPQTPV NAWSPQSQQTPVNVSTSMVNTRPSPKPWHSPQNAPQNRTPPTPPQRMHSFTIGQRASSPI NPMATVLNPSSQGSAFEMPAVRGKGADMFAKRQSRMEKFVVDSETVQANKASRSTSPVAS LPNEWKYTPNVRAPPSRAYNPIQSPSYPPAATKQPPPSSPLTKAKTKAKEKQKPAPKPLS VVDVMKHQPYQLNSSLFTFGPAAEAANPTEPKPDISPPNPPVENQTNTYEQMAPIQPVGP YNVTSPQYPQQAYGMPMQPIMHDGHYQQNPANVYPPHNPYQQPPDGPYLQAYNQQYQQPA PPAYHPQAPQSPNPAYQQASQAPYPPANSPPYLAAPSVPYQPQPPSSYVVPCFPVAARPE SVSGGSTVAPKPKFTAKKSSAQVWKPAAVDKE NT seq 4779 nt NT seq  +upstreamnt  +downstreamnt atgggcaccggggattacatctgcgctacgctgcgtggtggtgcaccctggggattcacc ctaagagagggagagggggacacctacagacctctcttagtttcccaggtagaactaggt ggtcgtgccttcctagctggagtgcgagaaggtgacgaggtggtgtcactcaacggagag ccatgtgcatatctcacccttttacgagcctttgcactcattgacacatcgatcgactgt ctgcagctgcttgtcaaaagatactgcactatccccaaagaagactatgaatcagatgag acatactgtggtgagagggactcctctggtgaggctttagagagcaccaccatccatatc ttctccccaaagcagaagtcccaaagcccaaggaaactctacatatctgagttccaggac gaggcctcttatggggagttggacagcaacaaagagttccccaagggaccccagctgctt cacccccagctatgtgttcctccacttggtgatcggagaggcagggagcctgtttttgag gaaaatgatgaagaagcacgccggtgcttctcccctggggacatggttgagctccaggtg tccctgtccgagcaaaccttggacgatgtgggctgcacctctcttgggagtgctcatggg attgaaggagaactctcaaacaaagaggctattgagacaatccacaccactaccgcatca cactacgtgccatgttctgtcagagagccgctcggccagcgtggagtggtgctcagctct cctttaatgctgggacaggtggaggtcattttgcagcagacagcagcatcaggagcaggg aggggcatcttgagtgtgggtggccccagggtcagtggaagtgttggatcccaaagtgaa ggggaagaaggagaagggcactgcgagggggtgtctgggtcttccgctgtctcattcaga actccctcagaagaggtgacaccagcagaagagcaggactctgaatctgagggcgatcca gacaaacccaacaagcatcgggcaaggcacgccaggctcaggcgcagcgagagtctatct gaaaagcaggtgaaggaggccaaatccaaatgtaagcgtattgctctccttctcacggct gctcggtccaaccctaacaacaagggggtgttgatgttcaagaaacatcggcagagggcc aagaaatacacacttgtgagctacggcacaggagaagacgaaccagaatacagcgacgaa gaagacgaggaaaacgaagacaacaaacaagaaactcacactgttgaatttacccttgtg gctccaaacgcttctgaaatagacaagcatttcctcactaatgcccatagtagcaaaggt gtgctaactatcaactgggacaagggtctccttgaaattgaaaggaacctgaacaaccaa gcagagatggaatgtttgcctgacaccaagggcaagggtgccgtaatgtttgcccaacgg cgtcagcggatggatgagattgctgctgaacatgaggagcttaggcgccaggggatcgcc gtggaaggagttcagattgctgataagaagatagaagagcactcctatacgcagtccaga acagaaggccatgcttacatggatgtaaatgtacaccaacaaatccaacaccaacagcag taccagcaatatcaggaacagcagtactatgagcaacaacagaactaccaacaacaacaa caacaacaacaacaacaacaacagtatcagcagcaacagcagtatgaacaacagctttat caacaacagcaaatgtatcagaagcagcaagaatatcatcaagagcaacagcaaatgcag cactattctgcaaacatcaatggaacagtccaacatgaaatgcagagttctctcaacaat cgtactgcaaaacctttctcagtagaaaacatggcgacttcctcttactctcctgcaatg agtggagtcaatcaagattctgtgggccaaggagagcagatagcttcccgggatgagcgc atttctactcctgcaagtcgaactgggcttttgtcagactgcaggagacgaaatgctggc aagccaatgttcacttttaaagaagcaccaaaaatatcaccaaacccagcattgctaaac ctcctcaacagaaatgacaagaagttgggttttgagtcagggcctgaggaagactacctt agtcttggggctgaggcttgtaatttcctgcagtctcaacgaaataaacaaaagaatcct ccaccggtggctccaaagcctgtgatcaaccccaactctcctccatggttcccaccgata gaagagagcaaccaggacatgcctcaacaagctgaaaatagtgtatccacacctgctgta gcccccaccacagagactacacttgctccagaactaaagccaaaccctgcacctgtctct gagccctctccccctcctgccccccagaaagctcctgccagcaccgccacagaggaacag tgcccatgtactctcccggagcctgaatctcaacaacagcttctgcaagtgacagctcag gaaaatggtcatatgaattctatccttcaacctgagcctgctcctgtgactagttgggct caagcacaaacacatccacaacaggaatctaccaattcttggcatccagctcaagtgcag ccccaggaaccacctcaaagtcagtccccaccacagccaccttgggtgacgcgtcatcct actcagatccaagcacagcctcaaccccctacaagtaattggacccctcaaattcagcca tcctggagtcagcatcaagagcaagcacaagcccagacacatgctcagccaccatggacc atgcgtcaagagcaaccacagtctcatccacaggcccagcctccctggacacattctcat gagcagccaaatctgcagcaaatgcaaccaacttggggtcaacttcaagaaccaatgcag cagcagccccaggcaccttgggcacagccatcacaaacagaacatcagaatcaaccaaca tgggtgcaacccctgcaaaaatcccaagtgcaacctccttgggctcaacaggtccaggca gaatcccagccacagccaccatgggttcagcaaccacagcatcaggctccacaacaagca tggccacaggcccaagcaccaggtcagcctcaaacatcttgggtcacagttcagcctcaa cagcaaccctcaaataatgcatggcctcaatcacaaactcaagttcagccaccttggatt caagcagcccaagcacaacccccagcaccgcctcaagccattttaaatccatggccacca gtacctgcccaggctcagtcccaaccgtcatgggcccagcacccttcagaacatggtcag acaccaataaattcttgggcccaagagcaaaatccggcccaacagcaaccaccttgggct caaccagttccttcccagcccacaccacagccaaactggcaacagtctacttcaaagact ccaccacagccaccaatgaatgcatggcctccaccccaagcacaacctcagacacctgtg aatgcgtggtcaccacaatcacaacaaacccctgtgaatgtttccacgtcaatggtgaac actcgtccctctccaaaaccttggcattcgccacaaaatgccccacaaaaccggacccct ccgactccaccacagcgaatgcactcttttaccataggtcaacgagcttcatcacctatc aacccaatggccacggtcttaaacccatcatcccaaggttcagcttttgagatgccagct gtcagagggaaaggagctgatatgttcgccaagaggcagtctcgtatggagaaatttgtt gtggactctgagactgtgcaagcaaacaaggcaagccggtcaacatcaccagttgcttcc ctaccaaatgagtggaaatatacacccaacgtacgcgctcctccctcacgggcatataat cctattcagtccccttcttatcccccagcagcaacaaagcagccccctccaagtagccct ttaaccaaagccaagacaaaagccaaagagaaacaaaaacctgctcctaaacccctcagt gttgtagatgttatgaagcatcaaccctatcaactcaattcctcactttttacctttggc ccagcagcagaggctgccaaccccactgaacctaagcctgacatttcaccccctaaccca cctgttgaaaaccaaacaaatacatatgagcaaatggcccccatccagccagttggacca tataacgtcaccagcccccaatacccccagcaagcctatggaatgcccatgcagcctatc atgcatgatggccactaccaacaaaacccagctaatgtttatcctccccacaacccatat caacaaccccctgatggtccgtacctgcaggcatataaccaacagtatcagcaacctgcc ccacctgcttatcatccccaagctcctcagtctccaaaccctgcctaccaacaggcatcg caggccccttacccaccagctaatagccctccctacctggcagctccctcagtaccttac cagccacagcctcccagtagctatgttgttccttgttttcctgtagctgcaaggcctgaa tctgtatctggtggcagcactgtagctcctaaacctaagtttacagctaaaaagagctca gctcaagtgtggaaacctgcagcagttgataaagagtga

DBGET integrated database retrieval system