Etheostoma cragini (Arkansas darter): 117934981
Help
Entry
117934981 CDS
T07493
Symbol
dysf
Name
(RefSeq) dysferlin isoform X1
KO
K18261
dysferlin
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ecra04131
]
117934981 (dysf)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ecra04147
]
117934981 (dysf)
Membrane trafficking [BR:
ecra04131
]
Endosome - Lysosome transport
Others
Ferlins
117934981 (dysf)
Exosome [BR:
ecra04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
117934981 (dysf)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
dsrm_Ferlin
FerB
Ferlin_C
FerA
FerI
CEP76-C2
PTEN_C2
Motif
Other DBs
NCBI-GeneID:
117934981
NCBI-ProteinID:
XP_034712905
LinkDB
All DBs
Position
19:complement(2479245..2556856)
Genome browser
AA seq
2134 aa
AA seq
DB search
MLRCVLQRANNLRHADPLASVTFRGSKKKTKIIKNNPNPVWNEGFEWDLKGIPLDSGAEL
HCVVKDHEKMGRNRFLGETRLALRDVLNSPNLAATFTVSLLDTKRNNTGATLTLQVSYIP
PAGAAPMFHSTPHAETLPYNNPNVELDTVTMISLDTLGEEDTESMMMLEPTEDQGPDDGR
SMVIVGPQGPSGQESPTAQTPKRSPPSYNTHGGLRKRRRGASSQPKPLPNKPQDLQVRVR
IIEGRQLPGINIKPVVKVTVAGQTKRTRIRKGNNPVFDETFFLNFFETPSDLFDEPIFIT
VCDSRSLRTDAVIGEFKLDVGTVYNEHRHCFLRKWLLLCDPDDLSAGVKGYLKVSLLVLA
AGDEPPADKRECVEDKEDIEGNLLRPAGLSLRGATFTLRIFRAEDLPQMDDAFMDGMRQI
LGFDSNRKNLVDPLVEIHFAGKTVCTKILEKNANPQWNQSLVMPIRFPSMCEKMRIRILD
WDRASHNDVIGTTHLCMSKISAPGGEIDDDLTPRNFHSGIDDSLGFLPTFGPCFVNLYGS
PREFSAFNDPHEALNLGKGEGVAYRGRVLLEVTTKLANKPEPKTGDIPSDDLLVVEKFLR
KRKFSLFVAFYSATLLQDVDDAIQFEVSIGNYGNKFDYTCLPLASTTQFSRAVFDGCHYY
YIPWGNIKPVVVLSSEWEDIKPRIEALNMLLAAIDRLEANLQRVQLEVKAGTDLDDVELR
VVELLDQIITDCSEELPSLDQWQCATPLDRSLRHVRTLHLQQIVAAAQALKHGPATELST
VMEQAEDWAARLRTMAEEPQNSLPDIVIWMLQGDRRVAYHRIPAHTVIFSQQHCGKHCGQ
LQTVFLRNPQGSGGEAKLPGQLRVKVWFGLAADVKHFNQYAEGKLSVFAETYENQTRLAL
VGSWGTTGLTYPKFSDVTGRIKLPKESFKPSPGWAWAGDWYISPEKTMLYDVDAGHMTYS
EEVFENQMRLPGGQWIGMPEGYTDVNGEKAVPKDEVECPAGWVWEEVEWCEDLNRAVDDQ
GWEYGLTIPPDRRPKSWVPAEKMYHTNRRRRWTRMRRRDQQRMDALRKQRPDEADREGWE
YASLFGWRFHLKPRKTDSFRRRRWRYRMEPLEKTGPAAIFALECSLSSIEDKNDDKSVTT
TFGVNRPTISCFFDRGTRYHLRCYLYQARDLPAMDKDSFSDPYAIVSFLHQSQKTVTVRN
TLNPTWDQTLIFYEVEIFGDPDATMATPPNVVVELYDQDTYGADEFMGRCVCQPSLTASP
HLAWFPIRRGDKSGGELLAAFELICREKQAVHHIPGQEGDILTGCHVLDELMFPGFLSEN
LQQWPEESDLPHLPPQREPNVFMVPQGIKPVLQRTAIEILAWGVRNLKSFQLASITSPSL
QVECGGVMVQSCVIRSMKKKPNFDVNTLILDVRLPCEELYMPPIIIKVIDNRQFGRKPVV
GQCTIRSLEEYRCSLEEEQEVEAEDEDKDWRRETSHFVSGEVFIDIDDEEPLMPDQLADG
SGSAIINLSASTSSLHMLQWEEEFMDWWSKFYASTGEKNKYGTYLERGFDKLKVFDQELE
KVEGFEGLSDFCQTFKLHRGKTQDEGEDPSVVGEFKGMFKIYPLPEDPSVPAPPRQFRKL
PPNGIEECLVRIYIVQAQGLQPKDTNGKCDPYVKIALGKKTINDHENYIPCTLDPVFGKM
FELTCSLPLEKDLRVMLYDHDMLTKDEKIGETVIDLENRFLSKYGGRCGLPQSYCVSGVN
QWRDQLKPSQLLCRVCERQNLRKPVYQDNVVHFRGDRYTAADLEDKNVSKRHLGSIKERL
SLIILRKMGFVPEHVETRPLYSPLQPDIEQGRLLMWVDLFPKSLGPPGPPFNITPRKAKK
FFLRCIIWNTSDVLLDDVSVSGEKMSDIYVKGWLDGHEHNKQKTDVHYRSLGGEGNFNYR
FLFPFHYLPAEQRCTVNRKEHFWSLDKAETKLAPELTIQIWDNDKFSFDDYLGHLVLNLN
QMQRPAKSPEKCTLQLLSQPTDRLVSLFEQKTVKGWWPCTYEQNGEKIIAGKVEMSLEIV
TEQEHEERPAGVGRDEPNMNPHLEEPQRPETSFLWFSSPYKTLKFILWRRFKWFIILFII
LFFIFLFFGVFLYSFPNYAAMKMVGPFGPAKAAE
NT seq
6405 nt
NT seq
+upstream
nt +downstream
nt
atgttacgttgcgttcttcagcgagcgaacaacctcagacacgctgaccctctggctagt
gtcacattcagagggtctaagaagaagacaaagatcatcaagaacaaccctaaccctgtt
tggaacgagggttttgaatgggatctgaaggggattcctctggattctggagcagagcta
cactgtgtcgtcaaagaccatgagaagatgggcagaaacaggtttctgggggaaacccgg
ctggctctcagagacgtgctcaactctcccaacctggccgccaccttcaccgtctccctg
ctggacacgaagagaaacaacacaggggccacgctgaccctgcaggtttcctacatacct
cctgcaggagcggctccgatgtttcattctactccccacgcggaaactttgccctataac
aaccccaatgtggagctggacactgtcacaatgatttctctggacactttgggcgaggag
gataccgagagcatgatgatgctggagccgacagaggaccagggtcccgacgacggacgc
tccatggtcatcgtcggtcctcaggggccctcgggccaggagtcccctaccgctcagaca
cctaaacgctcgcccccatcctacaacacccatggagggctgaggaaacggaggagagga
gccagcagtcagcccaaaccgctgcccaacaaaccacaggacttacaggttcgtgtgcgg
atcatcgagggccgacagttgccgggcatcaacatcaagcctgttgtcaaggtaacggta
gccgggcagaccaagaggacccgcatcagaaagggaaacaaccccgtctttgatgagact
ttcttcttgaacttctttgagacgccttcagacttgtttgatgaacccatcttcatcact
gtgtgcgactctcgctcactcagaactgatgctgtgatcggtgaattcaagttggatgtg
ggcaccgtctacaatgagcacagacactgcttcttgaggaaatggctactgctgtgcgac
cccgatgacctctctgccggggtcaaaggttaccttaaggtcagcctgctggtattggca
gctggagacgagccaccggctgataaacgcgagtgtgtggaggataaagaagacatagaa
ggaaacctgctgagaccggctggtctgtctctgagaggagcaactttcaccctgaggatc
ttcagagctgaagacctgccgcagatggacgatgccttcatggacgggatgaggcagatt
cttggctttgacagcaacaggaagaacctggtggatcctctggtggagatccactttgct
ggcaaaactgtgtgcactaagattctggagaagaatgccaatccacaatggaaccagagt
ctggtcatgcctattaggtttccctccatgtgtgagaagatgaggatcagaattctggac
tgggacagagccagtcacaatgatgtcatcggcaccacccacctctgcatgtctaagatc
tccgcgcccggtggtgagatagatgatgacttgactccacggaacttccactctggcatt
gacgacagtcttggtttcctgccaacgttcggtccctgttttgtgaacctgtatggcagc
cccagagagttcagcgccttcaacgacccacacgaagcactcaatcttggaaaaggggag
ggcgtggcctaccgaggtcgagttttactggaagtaactacaaaactggcgaacaagccg
gagccgaaaactggagacataccgtcagatgacctgctggtggtggagaagttcctcagg
aagaggaagttctctctcttcgtggcattttactcggccacgctcctccaggatgtcgac
gacgccatccagtttgaggtcagcatcggtaactacggcaacaagtttgactacacctgc
ctccctctggcctccaccactcagttcagcagggctgtgtttgacggttgccactactac
tacatcccgtgggggaacattaaaccagtggtggttctgtcctcagagtgggaagatatc
aaaccgaggatcgaggccctcaacatgctgctggccgccatagacagattggaggcaaac
ctgcagagggtgcagctggaggtgaaggcaggcactgatctggatgacgtggagctccga
gtggtcgagctgttggatcagatcatcacagactgcagtgaagagctgccgtctctcgac
cagtggcagtgtgcgacccctctggaccgctcgctgaggcacgttcggactctccacctg
cagcagatcgttgcggctgcgcaggctctcaagcacggccctgccaccgagctctccaca
gtgatggagcaggcagaggactgggccgccagactgaggacaatggccgaggagcctcag
aacagtctcccagacatagtgatatggatgctgcagggcgaccgcagggtggcgtaccac
cgcatccccgcacacactgtgatcttctcccagcagcactgtgggaaacactgcggacag
ctgcagactgtcttcctcaggaacccacagggcagcggcggagaggccaaacttcccgga
cagctgagggtcaaagtctggtttggattggcggctgatgtcaaacacttcaaccaatac
gctgaagggaaactgtcggtctttgctgagacgtatgagaaccagacacgactcgccctg
gtgggcagctggggaactacaggtctgacctaccccaagttcagtgatgtcactggaaga
attaaactgcccaaagagagcttcaagccctctcctggctgggcctgggccggagactgg
tacatcagccccgagaagacaatgctgtatgacgtggacgccggccacatgacctactca
gaggaagtctttgaaaaccagatgaggttgccgggcggacagtggattggcatgccggag
gggtacactgacgtgaatggggagaaggcggtgccaaaggacgaggtggagtgtcctgca
ggttgggtatgggaggaggtggagtggtgcgaagatctcaacagggctgtggatgatcaa
ggctgggagtacggcctcaccatccctccggatcgccgtcccaagtcgtgggtgccggca
gagaagatgtaccacaccaaccgaagacgacgatggacgcgaatgagacggcgagaccag
cagaggatggatgctctccgcaagcagcggccggacgaggcggacagggagggctgggag
tacgcctcgctgttcggctggaggttccacttgaagccgaggaagacggacagcttcagg
agacgcaggtggaggtatcgcatggagccgctggagaagacgggacccgccgccatcttt
gctctggagtgttctctgagcagtatcgaggacaagaacgatgacaagtccgtcacgacc
acgttcggagtcaacagaccaacaatttcctgtttctttgaccgcggcacccgctaccac
ctgcgctgctatctgtaccaagccagagacctgccggccatggacaaggacagcttctca
gacccctacgccattgtgtccttcctccatcagtcccagaaaaccgtgacggtgcgcaac
acattgaatcccacctgggaccagaccctcatcttctatgaggtggagatttttggcgat
cctgacgccacgatggccactccgcccaacgtcgtggtggagctttacgatcaagataca
tacggtgcagatgagttcatgggccgctgtgtgtgccagccctccctgactgcctctccc
catctggcctggtttccgattcgccgaggggataagagcggcggcgagctattggccgcc
ttcgagctgatatgcagagaaaagcaagcagttcaccatattccaggtcaagagggagac
atcctgaccggctgccacgttctggacgagttgatgtttccaggattcctctctgaaaac
cttcagcaatggccggaggagtcagaccttcctcacctacccccccagagagagcccaac
gtcttcatggtccctcagggaatcaaacctgttctgcagagaaccgccatcgagatctta
gcgtggggcgttcgcaacctgaaaagtttccagttggcgagcattacctccccgagcctg
caggtggagtgcggcggcgtcatggtccagagctgcgtcatccgcagcatgaagaagaag
cccaactttgacgtcaacacgctcatccttgatgtgcgtctcccctgcgaggagctctac
atgccgccgatcatcatcaaagtcatcgacaaccgtcagtttgggaggaagccagtggtc
ggtcagtgcaccatccggtcgctggaggagtatcgctgcagcctagaggaggagcaagag
gtggaggcggaggacgaggacaaggactggagacgtgagacgtcccactttgtttctggg
gaggtttttattgacatcgatgacgaggagccgctcatgcctgaccagcttgcagatgga
tccggttcagcaatcattaacctttccgcctctacttccagcctccatatgttgcagtgg
gaagaggagttcatggactggtggagtaagttctacgcctcgaccggagagaaaaacaag
tacgggacgtacctggagagaggcttcgacaagctgaaggtgtttgaccaggagttggag
aaggtggagggctttgaaggtctctcagatttctgtcagacgtttaagctgcacagagga
aagactcaggatgaaggagaagatccttcggtggtaggagagttcaagggtatgttcaag
atctacccactaccagaggacccctctgtccccgctccccccagacagttcagaaagctt
cctcccaacggcattgaggagtgtttggtgcggatctacatcgtccaggctcaaggactg
cagcccaaagacaccaacgggaagtgtgacccctatgtgaagatcgctttggggaaaaag
accatcaacgaccatgaaaactacatcccatgtactctggaccccgtctttggaaagatg
ttcgagcttacatgttccctccctctggagaaggaccttcgggtgatgctgtacgaccac
gacatgctgaccaaagacgagaagatcggagagacggtgatcgacctggagaaccgcttt
ctgtccaagtacgggggcaggtgtggtctgccacagtcctactgtgtgtcgggggtaaac
cagtggcgagaccagctgaaacccagccagctgctgtgcagagtatgtgagcgccaaaac
ctgcgcaagcccgtctaccaagacaacgtggtccacttcagaggagaccgatacaccgct
gcagaccttgaggacaaaaatgtgtctaaacgtcacctcggttcaattaaggagcggctg
tccctcatcatcttgaggaaaatgggatttgtacctgaacatgtggagaccagaccactg
tacagtccactgcagcccgacatagagcagggccgtctgttgatgtgggtggacctgttc
cccaagtccctgggaccccctggacctccgttcaacatcacaccacgcaaggctaagaag
ttcttcctgcgttgcatcatctggaacaccagcgacgtcctcctggacgatgtcagcgtc
agcggggagaaaatgagtgacatctacgttaaaggctggctcgacggacacgagcacaac
aagcagaagaccgacgtccactaccgctctctgggcggagagggaaacttcaactacaga
ttcctgtttcctttccactatttacctgcagaacaacgctgtaccgtcaacaggaaggaa
catttctggagtctggataaagctgagactaaactggcccctgaactcaccatccagatc
tgggacaatgacaagttctccttcgacgactacctcggtcacctggtgttgaacctgaac
caaatgcagcgtccggccaagtctccagaaaaatgcaccttgcagctgctgagccagccg
acggacagactggtgtctctgttcgaacagaagaccgtcaaaggatggtggccctgcacc
tacgagcaaaacggagagaagatcattgctgggaaggtggagatgtctctggagatcgtg
acggagcaggagcacgaagagaggccagctggcgtcggcagagacgagcccaacatgaac
cctcacctggaggaaccccagcgtccagagacctccttcctttggttctcctccccctat
aagaccctcaagttcatcctgtggaggcggttcaagtggtttatcatcctctttatcatc
ctcttcttcatcttcctcttctttggcgtcttcctctactccttcccgaactacgctgct
atgaagatggtgggaccttttggaccagccaaggcagcagagtga
DBGET
integrated database retrieval system
