Etheostoma cragini (Arkansas darter): 117935077
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Entry
117935077 CDS
T07493
Name
(RefSeq) ras-related protein Rab-39B
KO
K07925
Ras-related protein Rab-39B
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
117935077
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ecra04131
]
117935077
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
ecra04031
]
117935077
Membrane trafficking [BR:
ecra04131
]
Autophagy
Other autophagy associated proteins
Rab GTPases
117935077
GTP-binding proteins [BR:
ecra04031
]
Small (monomeric) G-proteins
Rab Family
Rab39/42 [OT]
117935077
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
MMR_HSR1
Gtr1_RagA
AAA_22
VGCC_beta4Aa_N
ATP-grasp_5
TniB
Motif
Other DBs
NCBI-GeneID:
117935077
NCBI-ProteinID:
XP_034713121
LinkDB
All DBs
Position
19:4157346..4170185
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AA seq
213 aa
AA seq
DB search
MEAIWLYQFRLIVIGDSTVGKSCLIRRFTEGRFAQVSDPTVGVDFFSRLVEIEPGKRIKL
QIWDTAGQERFRSITRAYYRNSVGGLLLFDITNRRSFQNVHDWLEEARSHVQPHSIVFLL
VGHKCDLEAQRQVTRQEAEKLAGAYGMRYVETSARDAINVEHAFTELTRDIFALVRSGDI
TIQEGWEGVKSGFVPNVVHSSEEVTKSDRRCLC
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgatatggctctatcagttccggctgatcgtcatcggggactccacggtgggc
aagtcgtgtctgatccggcggttcacggagggacgcttcgcccaggtgtcggaccccacc
gtgggcgtggacttcttctcccggctggtggagatcgagccgggcaagcggatcaagctg
cagatctgggacaccgcgggccaggagcgcttcaggtccatcactagagcctactaccgt
aactctgtgggagggctcctcctgttcgacatcaccaaccgccgctcctttcagaatgtt
cacgattggctggaggaggctcgcagccacgtccagccccacagcatcgtcttcctattg
gtgggtcacaaatgtgacctggaggcacagcgccaggtgacccgccaggaagcagagaag
ctggcaggggcgtacgggatgcgctacgtggagacgtcggcgcgtgacgccatcaacgtg
gagcacgccttcaccgagctgactagagacatcttcgccctggtgcggtctggcgatatc
acgatccaggagggctgggaaggcgtgaagagcgggtttgtccccaacgtggttcactcc
tcggaagaagtgaccaagagtgaccgccgctgtctgtgttga
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