Etheostoma cragini (Arkansas darter): 117935080
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Entry
117935080 CDS
T07493
Name
(RefSeq) ATP-dependent RNA helicase DDX39A
KO
K13182
ATP-dependent RNA helicase DDX39 [EC:
5.6.2.7
]
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ecra03041
]
117935080
Enzymes [BR:
ecra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
117935080
Spliceosome [BR:
ecra03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
117935080
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
117935080
NCBI-ProteinID:
XP_034713128
LinkDB
All DBs
Position
2:complement(19364057..19369761)
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AA seq
427 aa
AA seq
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MAETDVDNELLDYEEDEEPQGAPESGTAANKKEVKGSYVSIHSSGFRDFLLKPELLRAIV
DCGFEHPSEVQHECIPQAILGMDILCQAKSGMGKTAVFVLATLQQIEPVDGQVSVLVMCH
TRELAFQISKEYERFSKYMPTVKVSVFFGGLAMKKDEDVLKKNCPHIVVGTPGRTLALIR
NKTLNVKNIKHFVLDECDRMLEQLDMRRDVQEIFRVTPHEKQVMMFSATLSKDVRPVCRK
FMQDPMEVFVDDETKLTLHGLQQYYCKLKDSEKNRKLFDLLDVLEFNQVVIFVKSVQRCV
ALSQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFN
YDMPEDSDTYLHRVARAGRFGTKGLAVTFVSDEDDAKTLNDVQDRFEVNVAELPEEIDIS
SYIEQSR
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggctgagaccgacgttgacaatgaacttttggactatgaggaggacgaggagccccag
ggagcccctgagagtgggacagcagcaaacaagaaggaagtgaaggggtcctacgtatcc
attcacagctcaggcttcagagactttctcctcaaaccagagctgctccgtgccattgtc
gactgtggttttgagcatccctcagaagtccaacatgagtgtattccacaagctatcctg
ggcatggacatcctgtgtcaggccaagtctggtatgggaaagacggcagtgtttgtactg
gctacgctgcaacagatagaacctgtggatggtcaggtgtctgtccttgtaatgtgccac
acacgagagttggccttccagatcagcaaagagtatgagcgcttctcaaagtacatgccc
actgtaaaggtgtccgtgttctttggcggcctggccatgaagaaggacgaggacgtcctg
aaaaagaactgccctcacattgttgtaggaactccaggacgtaccctggccctcattcgc
aacaagaccctcaatgtgaagaacattaaacactttgtgctcgacgagtgcgataggatg
ctagagcagcttgacatgaggcgtgatgtccaggaaatcttcagggtgacaccccatgag
aaacaggttatgatgttcagtgcaacgctaagcaaagacgtccgccctgtctgccgcaag
ttcatgcaggatcccatggaagtgtttgtggatgatgagaccaagctgacactccatggc
ttacagcagtattactgcaagttgaaggacagcgagaaaaaccgaaagctctttgacctg
ctcgacgtcttagagttcaaccaggtggtgatctttgttaagtcagtgcaacgctgtgtg
gctctgtcccagctgctggtggagcagaacttccctgccatcgccatccacaggggcatg
gcgcaggaggagcggttatcccgataccagcaattcaaagactttcaacggcgaatcctg
gttgccaccaacctgtttggccgaggcatggacattgagcgagtcaacattgtcttcaac
tacgacatgccagaggattctgacacataccttcacagagttgcccgtgctggcaggttt
gggaccaaaggcctggctgtcacctttgtgtctgacgaggatgacgccaagaccctgaac
gatgtccaagaccgctttgaggtcaacgtggcagagctaccagaggagatcgatatctcc
tcctacattgaacagtcaagatga
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