Etheostoma cragini (Arkansas darter): 117935311
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Entry
117935311 CDS
T07493
Symbol
pcare1
Name
(RefSeq) photoreceptor cilium actin regulator
KO
K24165
photoreceptor cilium actin regulator
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ecra03037
]
117935311 (pcare1)
04812 Cytoskeleton proteins [BR:
ecra04812
]
117935311 (pcare1)
Cilium and associated proteins [BR:
ecra03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
117935311 (pcare1)
Cytoskeleton proteins [BR:
ecra04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
117935311 (pcare1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Retinal
SH3-A_UBE2O
Motif
Other DBs
NCBI-GeneID:
117935311
NCBI-ProteinID:
XP_034713293
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All DBs
Position
20:20761558..20766538
Genome browser
AA seq
1170 aa
AA seq
DB search
MGCSPSKGNHFGILGPMRKGRMLPPAPQEIPRDSHFVDGKNRYSTGSTDGDTKERKAAGQ
TQTCQTEAHVTPQKKRYVTELSPEAVNMDKLGSQKMDHNTVSQKKDKHVDRQDVTEKKPI
RKQKKMTRGIKGLKKKDKEKDQPPTEQKVDFPDPLVKAHQAAYAFLNPSINKYDDILGLL
EEATQTQVSVQTMVAFMALRYEEIIQGLEEMADEGEKVLKENGEHLAWPSQMKNLSSSPP
LKSGSANIEPPPDLLQQLLQYTTQRMQNVSQTVGGIGESALEDAVEYFASVSELLEEKLK
LKHAVETRLMRLLTRIEMASLRKPGPEDSALFSEDSGIGAESESLAGSDRRNRRESCAST
GTNRTTPASPMGYTSMTSRQGVSRQKLPSQRSPSVSLTSLNSLGSTCTIMANYQRDSLLG
SVSLDYGEEDDNDDDDDDDDDEGEMDRGMGDVGFRLRSNSSPVDREQQQPRRLPPKRIEN
PQNVEMTLKMKNAISGRIKFVPSQNASAKTKIVGSPKSSRHQWTEDEEQSPKRPQTTAPR
KAVVKKTTVAREQRSQSAESLRKKGEDPTLLELERTQKDLNQKLQRMSISKACGSKAGGK
TASSKPNQGSSPAQSPAVIPKHPLLPTNSNPQPLDETASLIRINTKKHEVANVEEDKLKD
KKTSKGPIKATPPPSPPASPRPSSGLYRGRNSVKRLIDTFSQGIEDLECPKVLGPLKGVR
KCGVPVLPGLGNVEAVLSTGITSCRPESTSSEKANDLDLDSLPPPPLEVLLDNSFKSAQS
LSIGGVDDGATKVGKSPVLKRAAVSHRLRASVNTGTVLPSKGGLPQASKVISLAKADQED
TSAPSKFRQPDVKLEADQGKEKVSLYQQVKKSIHLRNSSDSQRSSTATHRSASREESADI
QHVGNLSVPSSNSTVSTVPPSVVRSQPPATPPMYRGRMLPSTPSTPSSLHRRLPSPHNFK
RQPTPPSSASPPVNRKLTTPQVVQETLPSPPQQNILNSNSSSSYPFKAPSPPASPKVQRW
SRENSSEDSSTARMISNARSVFCPASPSLFEAHPCPVPQPPQAWSSTGISFLSRSWGSRG
RFPVSVQGPRPFIRRSHSDRRPSLNLPPRSPGISVAETCGSEPAICSQGLDDEPTGDEEL
WGSQSNLRANQLRSVSHPDLCVVGQALHRD
NT seq
3513 nt
NT seq
+upstream
nt +downstream
nt
atgggctgctcaccatccaaaggtaaccattttgggattctgggtcccatgaggaagggg
cgaatgcttccccctgcacctcaagaaatccccagagattcccactttgtagatggaaag
aatcgttattcaactggatcaacggatggggatacaaaggagagaaaggcagccggacaa
acccagacatgccagacagaagctcatgtgacaccacaaaaaaaaagatatgtgaccgag
ctatctccagaagcagtaaacatggataaactggggagtcaaaaaatggaccacaacaca
gtttcacagaaaaaagacaagcacgttgacaggcaggatgtgaccgaaaaaaaacctatc
agaaaacaaaagaaaatgaccagaggtattaaggggctaaaaaagaaagacaaggaaaaa
gaccaaccacctacagaacagaaagtggacttccctgaccctttggtaaaagctcaccaa
gctgcttatgcttttttgaatcctagcataaacaaatatgacgatatactaggacttttg
gaagaagcaacccaaacacaggtttctgtgcagactatggttgctttcatggctctgcgc
tatgaggaaataattcaaggtctggaggagatggccgacgagggagaaaaagttttaaaa
gaaaatggagaacatcttgcttggccaagtcaaatgaaaaacctctcatcttctccacct
ttgaaatctggctctgctaatattgagcccccaccggatttgttgcagcagctgcttcag
tacaccacacagagaatgcaaaatgtgagccagactgtgggtggaattggagagtctgct
ttggaggatgcagtggagtactttgcgtctgtctcagaacttttagaggagaaactgaaa
ctcaaacatgcagtagagactaggctaatgcgacttttaactcgcattgaaatggcgtct
ctgcgcaagcctgggccagaggattctgctctctttagtgaggacagtggtattggggct
gagagcgaatcccttgctggatctgacagacgcaatagacgagagagctgtgcgtccact
gggacaaatagaactactcctgccagtcctatgggatatacctccatgaccagtaggcaa
ggagtatcaaggcaaaagcttccaagtcaaagaagtcccagtgtttctcttacctcactc
aactcgttaggttctacatgtaccataatggctaactaccaaagagactcattgctagga
tcagtctccttagattatggggaggaagatgacaatgatgatgatgatgatgatgatgat
gatgagggggagatggatagaggcatgggagatgtaggctttagactgcgatcaaattct
tcacctgtagaccgtgaacaacaacaaccacgccgcctaccaccaaagcgcatagagaat
cctcaaaatgtcgaaatgactctcaaaatgaaaaatgcaataagtggtcggataaagttt
gtcccatcacagaatgctagtgccaaaacaaagatagttggcagtccaaaaagcagtaga
caccagtggacagaggatgaggaacaatctccaaagaggcctcaaacaacagcacctcgg
aaggcagtggtaaaaaagaccacagtggccagggaacaacgttcacagtcagcagaatcc
ctgcggaagaaaggtgaagatcctactcttcttgaactagaaaggacacagaaggattta
aaccagaagttacagaggatgagtataagcaaggcatgtggaagcaaagcaggtggaaag
actgcttcatctaagccaaatcaaggatcatcaccagcacagtctccagcagtaattcca
aaacatcccttactaccaacgaacagcaatccccaaccacttgatgaaacagcaagcctt
atcaggatcaacactaaaaaacatgaggtagccaatgtagaagaagataaacttaaggac
aagaaaacatccaagggtccaataaaagccaccccacccccaagccctcctgcatcacca
cgaccatcttcgggactttacagaggcaggaactcagtcaaaagactgattgataccttc
agccaaggaatagaggatctagaatgtcccaaagttctggggcctctcaaaggagtacga
aagtgtggtgttcctgtgttacctggtttagggaatgtagaagctgtgttaagcactgga
ataaccagctgtagaccggaatccacttcatctgaaaaagccaatgatttagatctggat
agtcttcctccacctccgctggaagtattattggacaattccttcaaaagcgcccagagt
ctttcaattggtggagtagatgacggggctacaaaagttggaaaatcacctgtattaaaa
agggctgctgtatcgcatcgactgagggcctcagttaatacagggacagtgctgccaagt
aaaggaggcctgccacaagcttccaaggttatttcccttgctaaagcagatcaagaagac
acatctgctccgtcaaagttcaggcaaccagatgtcaaactggaggcagaccaaggaaag
gaaaaggtttccttataccagcaagtcaaaaagagtatacatctaagaaactcttctgac
tcacagagatcttcaacagcaacacatcgatctgccagtcgagaagaatcagcagacata
caacatgttggcaacctttcagtgcctagttctaactctacagtgtctacagtgcctcct
tcagtggtcaggagccaaccacctgccacccctccgatgtatagggggcgaatgttaccc
tccacaccttctacaccaagtagtctacatcgaagacttcccagtccccataacttcaaa
aggcaacctactccaccctcttcagctagcccccctgttaacaggaaactcaccacacca
caagtagttcaagagacgctccccagcccaccccagcagaatattttaaactcaaattca
tcctcctcctaccctttcaaagcaccgtctccaccagcctcgccaaaagtacaaagatgg
tcaagggagaacagcagtgaagactcatctactgcacggatgatcagtaatgcacgttca
gtgttctgccctgcatccccatccctgtttgaggcccatccttgtccagttcctcaaccc
cctcaagcatggtcctctactggtatctcttttctctcacgttcttgggggagtcgtggg
aggtttcctgtatctgttcaaggacctcgaccctttatccgacgtagccattcagaccga
aggccaagtctaaatctgccaccaaggtcaccaggcatctcagtggctgagacttgtgga
agtgagcctgccatatgctcacaggggttggacgatgaaccaaccggggacgaagaatta
tgggggagccaatcaaacctcagagccaatcaactacgctctgtatcacacccggacctg
tgtgttgttggacaggccttgcacagagactga
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