Etheostoma cragini (Arkansas darter): 117935401
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Entry
117935401 CDS
T07493
Symbol
trip11
Name
(RefSeq) thyroid receptor-interacting protein 11
KO
K23368
thyroid receptor-interacting protein 11
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ecra04131
]
117935401 (trip11)
Membrane trafficking [BR:
ecra04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
117935401 (trip11)
Retrieval pathways
117935401 (trip11)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GRAB
CCDC39
Taxilin
FKBP15
Mod_r
DUF4407
FliJ
PUMA_CC
Motif
Other DBs
NCBI-GeneID:
117935401
NCBI-ProteinID:
XP_034713445
LinkDB
All DBs
Position
20:complement(5340414..5365740)
Genome browser
AA seq
1991 aa
AA seq
DB search
MSSWLGGLGSGLGQSLGQVGGSLSSFTGQISNFTKDMLLEGVEEVGDAATELQVSNSKLA
DIEAAFNTQKSEYDRLRKLYAELEEKLEASEIQIKGQSAEYRSLLQQKDVEISHLKARQT
VLQEEVRTLQQSAQSASTGPAMLPITTSSSTTTSSSASSYLSRPLGAHQGFHGDEMDLSD
VIWSQQEINRLSTEVVRLEAEVVHWRRMSQASTAAGAGNGDQGEILTLQRTIKELREEMS
REVDEHQHELAALQDAQRQKMADITRRHREDLAEYEERIEELEEQIQSGGSPSSSPSDAS
KLSEFQKTMRSLQEAADQREKQLAELSASLEEAQLKKASLQQERDEAQEENTGLLQNYTR
LQASVTELQTRVQEQEGKSLQKAQLEHEIQMLRTNLAAAENEIERLKSLAEEEPKEEVEH
ADILELNTTIATLREEKESLEQEKLNLQDRLEMAENQIVRNNETVSGDPESLEDLKAELE
RKAKALRNTEEERDTLMSELEELDRQNQEATQHMISVKEQLSGQLKEAEAELTELSAQLN
TTKDQKRALEQELETQKEKTSQSAFTLNDLHMVKQELERTVEELKEKLGHAEEQSRGAQR
KITEQRKTVQGREEQSSVAKADLDQSEDRGTEAQGTKENLAGKERELLDLRIELDEMRNS
LEKAMSEDYELKMEIRRLKAEKEQALGRAEEVTKQMKESQATLNRTVREKDTRIEALKLE
KSQLEEELGQTERTLMEQARQYQQTIEELTRARSMDASALQKEHERAIKLNQEKDMEIAQ
LKRDMEQVASDHRDTNEMLSITVSGQKQLTDLLQEKDVFLDTLKQNASDLQQEMENRIFV
LTKEADAFKLFLEEKDRQLGGMKEENSHLKEEIDRLRDQQSRPQPLTEPRTLEIITELET
EITQLKSSRNGLEEEVQTLRRTTEELQASLLVSQQSLQAQQTELDQAHARHQQVTLNYDR
LIHARDEEIACLQHTVDQLSDSGVRADFPLVQGEVILQEEKTHTLNQENGNEKHDLSKGE
IEKLVRGIKEKETEISQLNEKNLSLTRQLDQLAVSRDEVGKLSQMVLQKDLEIQALHARV
SMVGGGGHSQDIMFLQQQLQAYAVEREQVLAVLNEKTRENSQLRSDYHRLMDIMAGKEAA
LLKLQQENQRLSNISDPSGSQEMFKETIQNLSRIIREKDIEIDALTQKCQTLVTVLQSSV
GDSSSGSGGVSSNQFEELLQERDTLKQQVKKMEEWKQQVITTVKNMQHESAQLQEELIKL
QGQVSADSDCSSKLSVDYAGLIQSYEQKERRLGSLSQELAQVQQTITQLSTTKDVLLGKL
DSVTVVSGQTPDVVAAQSSGPWLTADAPSNQASPTANSDKPQEEILRLRIQLAERENMIR
TLKENNQRLSNSACATESEQRSQAEDVRLVKERLEAMQRSVREKDLLIKTKSDQLSHVSE
ALRNRENDNEVLKQAVTNLKERALILEMDVRKLKEENELVATRSREKESEFRALQETNMQ
VSLLLREKEFELSAVSEKSATVERMLKDKEQGKSGELNQLLNELKSMQEKAVAFQQERDQ
VMMALKQKQMETTAIQSELQHVRDKEQRLNLELERLRNHLLEIEDSYTREALGAEDRETE
LRRRVALLDEKLATSSSAVENASQQASMQVESLQEQLSGVVKQRDEALIHLRTSQEQVNQ
YAVSLSNLQMVLEQFQQEEKAMYSAELDRHKKEKDEWKRKAQRLEDQASALQINLDEANA
ALESASRLTDQLDLNEEQIEELKKQVEVRQEMLEEAQRKLMNLLNNTEGKIDKVLMRNLF
LGYFHTPKAKRSDVLRLMGSVLGLSREDVDKMLEEDGRHGVTGWMSNWLGGRGAQSAPNT
PPRPTGGQGFNTSFSEMFVKFLEIESTPSMPAPKLPFQDFKPLNAPPQGRTSGAASSGAA
GGGALSKRPGESNPFLAPRSAAVPLLAGSSSGGSGGHLLMKPISDNLPTFTPVPVSAEAS
GGAVLKDLLKQ
NT seq
5976 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgtggctcggtggactcggctccggcctcggccagtctctgggccaggtcgga
ggtagcctgtcctcattcactgggcagatatcaaactttaccaaagacatgttactggaa
ggggtggaggaagtaggagatgccgccacagaactgcaggtgtccaattccaagttggct
gacatagaggcagcatttaacactcaaaaatctgagtatgacagattaagaaagctctat
gcagaactcgaggagaagctggaagcatcggagatccagatcaaaggacagtctgcggag
tacagaagccttctgcaacagaaggatgtggagatcagtcatctgaaagctcggcagaca
gtcctccaggaagaagtccggacgctgcagcagtcggctcagtctgcttccacgggcccc
gccatgctacctatcaccacttcttcctcaaccactacctcctcgtccgcctcgtcttac
ctttcgcggcccttaggggcccaccagggcttccacggcgatgaaatggacctcagtgac
gtcatctggtcgcagcaggagatcaacaggctgtcaacagaagtggtgcgtctggaggca
gaggtggtgcactggaggcgaatgtctcaggcatcaacggcagcaggagctggtaacggc
gaccagggagagattctcacacttcaaagaactattaaggagctgcgagaggagatgagc
cgtgaggtggatgaacaccagcatgaactggcagctctgcaggacgcccagcgacagaag
atggccgacatcacacgccgacatagagaggacttagcagagtacgaggaaaggatagaa
gagctggaggaacagattcagagtggtggtagtccatcctcttccccatccgatgcctcc
aagctgtcggaattccagaaaaccatgaggtccctgcaggaagcagcagatcagcgggag
aagcagctggctgagctgtctgccagtctggaggaggcacagttgaaaaaggcgtccctg
cagcaggagagagatgaggcccaggaagaaaacacggggctgctgcagaactacacacgt
ctgcaggcctcagtcaccgaacttcagactcgagtacaggagcaggaggggaagtctctg
caaaaagcccagctagagcacgagatccaaatgttgagaacaaatcttgcagctgcagaa
aatgaaatagagcgactgaaaagcctggctgaggaagaaccaaaggaagaggttgagcat
gcagacatcttagaacttaacaccactattgcgacgttgagagaagaaaaggaaagtcta
gaacaagaaaagcttaatctgcaagatagactagaaatggcagagaaccaaatagttagg
aataatgaaacggtatctggtgaccccgagtccctggaggatctgaaggccgagctggag
agaaaggcaaaggccctgagaaacacagaggaggaacgggacactctgatgtctgagctg
gaggaactagaccggcaaaaccaggaagcaacacagcacatgatctcggtgaaggagcag
ctctctggacagctgaaggaggccgaggcagaattgacggaactgtctgcacagctgaac
acaaccaaagaccagaagagggcactggagcaagagctggagacccaaaaagagaaaact
agccagagtgcttttaccctcaacgacctgcacatggtcaaacaagagttggaacggaca
gtggaagagctgaaagagaaactgggacatgcagaagagcagagcaggggagcacaacga
aaaatcacagagcagaggaagactgttcaggggcgagaggagcaatcttctgttgccaaa
gcagatctggatcagtcagaggatagaggaacggaggcacagggaactaaagaaaaccta
gcagggaaggagagggagttgttagaccttaggatagaattggacgagatgaggaactct
ttggagaaggcgatgtctgaggactatgagttgaagatggagataaggaggttgaaggca
gagaaggagcaggctctaggtagagctgaggaagtaaccaagcagatgaaggagagccag
gcaactctgaacaggacagtgcgggagaaggacactcgtattgaagctctaaagctggag
aaaagtcagctagaggaggaattgggtcagactgaaaggacgctaatggagcaggcaaga
cagtaccagcagaccattgaggagttgactcgagcccgctccatggatgcctctgcttta
cagaaggagcatgagcgagccatcaaactcaaccaggagaaagacatggagatagctcag
cttaagagagacatggagcaagtggcgtccgaccacagagacaccaacgagatgctttcc
atcacagtttcagggcagaagcaactgaccgatcttctgcaggagaaggatgtcttcctg
gacacattgaaacaaaatgcttccgatttgcagcaggagatggagaaccgtatttttgtc
ttgacaaaggaagcggatgctttcaaactgttcctggaggagaaggacagacagttgggg
ggtatgaaggaggagaacagtcatttgaaagaagagattgaccgactcagggatcagcag
agcaggcctcaacctctgactgagccccggaccttagagattatcacagagctagagaca
gagatcacacagctcaagtcctccaggaatggactagaagaggaggtccagactctgagg
agaaccacggaggagctccaggcctctcttcttgtgtcgcagcagtccctacaggctcag
cagactgagctggaccaggctcacgctcgccatcagcaggttacacttaactacgacaga
ctcatccatgccagagacgaggagatagcttgcttgcagcacacagtagatcagcttagt
gacagtggcgttcgtgctgacttcccccttgtgcagggagaggtcatcctgcaggaggag
aagacccatactctgaatcaggagaacggcaacgagaaacacgacctgtctaagggcgaa
atagaaaagctggtgagaggcatcaaggagaaagagactgagatcagccagctgaacgag
aagaacctctcgctgaccagacagctggatcagctggcggtgtctcgcgacgaagtgggc
aaactttcccagatggtcctgcagaaggatctggagatccaggcactccacgccagagtg
tccatggttggagggggtggacacagccaggacatcatgttcctccagcagcagctgcag
gcgtacgccgtggagagagagcaagtgcttgccgtgctcaacgagaagaccagagagaac
agccagcttcgctcggactatcaccgtctcatggacatcatggcagggaaggaggcggcg
ctgttgaagcttcagcaggagaaccaacgcctctccaacattagcgatccctcaggaagc
caagagatgttcaaggagaccatccagaacctgtcccgcatcatcagggagaaggacatt
gagattgacgcgttgacccagaagtgccaaaccctggtgactgtcctgcagtcttcagtg
ggggattcaagctccggctccggaggtgtcagcagcaaccagtttgaggagctgctacag
gagagggacacattgaagcagcaggtgaagaagatggaggagtggaagcagcaggtgatt
accacagtcaagaacatgcagcacgagtcggctcagctgcaggaggagctgatcaaactg
cagggtcaagtctcggccgacagcgactgcagctccaagctgtcggtggactacgctgga
ctgatccagagctacgagcagaaggaaaggaggctggggagtctgagtcaggaactggct
caggtccagcagaccatcacccagctcagcaccaccaaggacgtcttgctcggcaaactg
gacagtgtcactgttgtgtcaggacagactcctgacgtcgtagctgctcaatctagtggc
ccttggctcacggctgatgcaccaagcaaccaggcgtctccaacagcaaacagtgacaaa
ccacaagaagaaattctccgattgcggattcagttggctgagagggagaacatgataagg
actcttaaggaaaacaaccagcggctctcgaactcggcgtgtgccacagagagcgagcag
agaagtcaggccgaggatgttcggctggtcaaagagcggctggaagccatgcagaggtct
gttagggagaaagacctgctaatcaaaaccaaaagcgaccagctgagtcacgtcagcgag
gcactacgcaaccgtgagaacgacaacgaggtgctgaagcaggcggtgaccaatttgaaa
gagcgggctcttattctagaaatggacgtgaggaagctgaaggaagagaatgagctggta
gctacgcgctctcgagagaaagagtctgagttcagagcgctgcaggaaaccaacatgcag
gtttcacttctgctgagagaaaaggagtttgaactgagtgcagtgagtgagaagtctgca
actgtggagaggatgctaaaggacaaagagcagggtaagtctggtgagctgaatcaactc
ctgaatgaactgaagtccatgcaggagaaggccgtggcgttccagcaggagagggatcag
gtgatgatggcactcaaacaaaaacaaatggagaccactgcaatacaatctgagcttcaa
catgtgagggacaaagaacagcgtcttaacttggagctggaaaggctgcgtaatcacctc
ttggagattgaggactcgtacacgagagaagccctcggtgcagaggacagggagacggaa
ctacgcaggagggtggcactgctggacgagaaactggccacgtcctcgagtgctgtggag
aatgccagccaacaggccagcatgcaggtggagtctctgcaggagcagctgagtggagtg
gtgaagcagagggacgaagccctcatccatctcagaacctcccaggagcaggtcaaccag
tatgcagtgtcactctccaacctgcagatggtgctagagcagtttcaacaagaagagaaa
gccatgtactcggcagagcttgataggcacaagaaagagaaggatgagtggaaaagaaaa
gctcagaggctggaagatcaagcatccgcccttcagattaacctcgatgaagccaacgct
gctctggagtcagcgtcgcgccttaccgatcagcttgatctaaacgaggagcagattgaa
gagctgaaaaaacaagtggaagtgagacaggagatgttggaggaggcgcagaggaaactg
atgaacctcctaaacaacacggaggggaagatagacaaagtcctgatgcgtaacctgttc
ttgggatacttccacacacctaaagccaagcgttccgatgtgctgaggctcatgggaagt
gttctgggactgagcagagaagatgttgataagatgttagaggaggacggacggcacggt
gttaccggatggatgtcgaactggctgggaggaagaggagcacaaagtgccccaaacacc
cccccaaggcccaccggtggccaagggttcaacacgtcattctccgagatgtttgtaaag
ttcctggagattgagtcgaccccttcgatgcccgcaccaaagcttccattccaggacttc
aagcctctaaacgccccccctcagggtagaaccagcggcgctgcttccagcggtgctgca
ggaggcggagccctcagcaagcggcccggcgagtccaatcctttcctggccccccgctct
gctgcggtgcccctgctggccggttccagctctggcggctcaggaggtcacctgctcatg
aagcccatctctgacaacctgcccaccttcacacctgtgcccgtctcagctgaggccagt
ggtggagctgtgctcaaagacctgttaaagcagtga
DBGET
integrated database retrieval system
