Etheostoma cragini (Arkansas darter): 117935413
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Entry
117935413 CDS
T07493
Symbol
dcaf5
Name
(RefSeq) DDB1- and CUL4-associated factor 5
KO
K11800
DDB1- and CUL4-associated factor 5
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ecra04121
]
117935413 (dcaf5)
Ubiquitin system [BR:
ecra04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
117935413 (dcaf5)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
WDR55
Beta-prop_EML_2
EIF3I
Beta-prop_EML
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
Beta-prop_HPS5
Beta-prop_WDR75_1st
Beta-prop_SPT8
WD40_MABP1-WDR62_2nd
WD40_RFWD3
Motif
Other DBs
NCBI-GeneID:
117935413
NCBI-ProteinID:
XP_034713475
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Position
20:complement(5748115..5765625)
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AA seq
793 aa
AA seq
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MLVMKELKGCGMRSSVGFLSRRELTGQPLMKEEFQRRRMDGCTSLYKKDMLGHFGCVNAI
EFSNNGGEWLVSGGDDRRVLLWHMEQAISARSKPVKLKGEHLSNIFCLAFDSTNKKVFSG
GNDEQVILHDVERRETLNVFLHIDAVYSLSVSPVNDNVFASSSDDGRVLIWDTREPPSAE
PFCLASYPSAFHSVMFNPVEPRLIATANSKEGVGLWDIRKPRSSLLRYGGSMSLQSAMSV
RFNSTGTQLLALRRRLPPVLYELHSRLPSFQFDNQGYFNSCTMKSCCFAGDKDQYILSGS
DDFNLYMWKIPKDPEEGGAGRVVNGAFMVLKGHRSIVNQVRFNPHTYMICSSGVEKVIKV
WSPYQQPESLGDLEGRVEDKSRSLYTHEEYISLVLNSGSGLSHDYVSQSIQEDPRMMAFF
DSLVRREIEGWSSDSDSDLSEEAIMQLHARGRRATRATPTPPAAVSAAAHHSDSDNSTSS
SLAGPDASGGEERAAAGERPRRRSRHQRHQSGFLVNEDSDSSEFWLDPMPRPRSPSPRDN
STLSSPPSSPSLPAGASSSSSSTSSSSSDDEERRSAVRRRNVTRRRRTQVVSRAGDRPES
VQTLFSAMDSCSYPSISIEDLSSSSGEAQDSLQIKPSACDAKDEDKCLSPSDFVCLSPVM
SSESQGNEEGSDKTELERHPAASPRSLDGRRTEGSAALDSSDSGEACSSSAALDSSSPSR
RSPGVNGRHRTVAPHVRENLHVSSESEEEPGVPPEDTRTRREKGPAQSALKRTHVGSEEG
KSGSSPSEKKFKT
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atgctggtaatgaaggagctaaagggctgcggtatgcgctcctcagtgggctttctgtcc
cgcagagagctgactgggcagccgctcatgaaggaagaattccagagacgcaggatggac
gggtgcaccagcctctacaagaaagatatgctcggacacttcggctgtgtcaacgccatt
gagttctccaacaacgggggagaatggctcgtgtctggaggagatgaccgtcgggtgctc
ctgtggcacatggaacaagccatcagtgctcggtccaagcctgtgaaactgaagggcgag
cacctgtccaacatcttctgcctggcctttgacagcaccaacaaaaaggtcttctctggt
ggaaatgacgaacaggtgattcttcacgatgtggagagaagggaaaccctgaacgtgttc
ctgcacatcgacgccgtgtacagcttgtctgtcagcccggtcaatgacaacgtgtttgcc
agctcatctgatgacggccgcgttcttatctgggacacccgggaaccgccaagtgcagag
ccattctgcctggccagctacccctcggccttccacagcgtgatgtttaaccctgtggag
cccaggctgatcgccacagccaactccaaggagggagttggattatgggacatccgcaag
ccgcgcagctcattgctgcgttacggaggcagcatgtccctgcagagcgccatgagcgtt
cgcttcaacagcacgggcacccagctgctggccctgcgccgccgcctgccgcccgtcctc
tacgagctgcactcccgcctgcccagcttccagttcgacaaccagggctacttcaactcc
tgcaccatgaaaagctgctgctttgccggggacaaagatcagtacatcttgtctgggtcc
gatgacttcaatctttacatgtggaaaatcccaaaggacccagaagaaggaggagctggt
cgtgtggtaaacggtgctttcatggtcctgaagggtcaccgctccatagtgaaccaggtt
cgcttcaaccctcacacctacatgatctgctcctccggcgtggagaaagtcatcaaggtg
tggagtccctaccagcagcctgagagtctaggtgacctggagggccgtgtggaggacaag
tcccgcagcctctacacccacgaggagtacatcagcctggtgctgaacagcggcagcggt
ctgtcccacgactacgtcagccagtccatccaggaggacccgcgcatgatggcgttcttc
gactcgctggtgcgtcgagagatcgaaggctggagctcggactctgacagcgacctgagc
gaggaggccatcatgcagctccacgcccgtggacgccgcgccaccagggccacgcccaca
ccgccggccgccgtctctgcagccgctcaccacagcgactctgataactcaacgtcgtcc
tcgctggctggacccgacgcctccgggggggaggagcgggccgcagcgggggagcggccc
aggagacggagcaggcaccagcggcatcagtcaggcttcctcgtcaacgaggactcggac
tcgagcgagttttggctggaccccatgccccggcctcgctccccgagccctagggacaac
tccacactgtccagccccccctcttctccctcactgcccgccggagcctccagctcgtcc
tcttccacttcgagctccagcagcgacgacgaggagcggcgtagcgcggtgagacggcgc
aacgtcacaaggcggcggcgcacgcaagtcgtctcaagagccggggatcggcccgagtcc
gtgcagactctgttttcggccatggactcctgcagttacccatctatatcaatcgaagac
ctgtcgtcatcctccggcgaggcgcaagactctctccaaatcaagccgagtgcctgcgac
gccaaagacgaggacaaatgtctgagcccttcggactttgtctgtctgagtccagtcatg
tcctccgagagtcaagggaacgaggaagggagtgacaagacggagctggaaagacatcca
gctgcgtctccgcgctcactggacggacgcaggactgaaggaagcgctgctttggacagc
tctgatagcggagaggcttgtagcagctcggcggctttagacagtagctctccgagccgg
cgtagccccggggtgaacgggcgacaccggacggtagcacctcacgtgagagagaacctc
cacgtctcctcagaatcagaggaagagcctggcgttccacccgaagacacccgaacacgg
agagaaaaaggcccggcacagagcgctctgaagcggactcatgtgggatcagaggagggc
aagtcaggctcctcgccctcagagaagaagttcaaaacataa
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