Etheostoma cragini (Arkansas darter): 117935419
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Entry
117935419 CDS
T07493
Symbol
atl1
Name
(RefSeq) atlastin-1 isoform X1
KO
K17339
atlastin [EC:3.6.5.-]
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ecra04131
]
117935419 (atl1)
Membrane trafficking [BR:
ecra04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
117935419 (atl1)
Autophagy
ER-phagy
ER-phagy recepters
117935419 (atl1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
GBP
GBP_C
FA_desaturase
DUF2207_C
Motif
Other DBs
NCBI-GeneID:
117935419
NCBI-ProteinID:
XP_034713486
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All DBs
Position
20:6005308..6016424
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AA seq
563 aa
AA seq
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MAKHRKDRDSWGEWSLSDKNVYDWSSEEEEPDGRARPVQVLLVKDDHTFELDEVALSRIL
LAEEVRDREVVAISVAGAFRKGKSFLMDFMLRYMYNHASEGWLGEADEPLTGFSWRGGSE
RETTGIQIWSEVFLVDKPDGKKVAVLLMDTQGTFDSQSTLRDSATVFALSTMISSMQVYN
ISQNVQEDDLQHLQLFTEYGRLAMEETFLKPFQSMIFLVRDWSFPYEFPYGQEGGMKFLE
KRLKISENQHEELQNVRKHIHSCFTNISCFLMPHPGLKVATNPHFDGRIIEIDGEFINNL
KVLVPWLLSPRNIDVKEINGSKITCRGLLEYFKAYIKIYQGEELPHPKSMLQATAEANNL
AAVAAAKDLYNKKMETVCGGDRPFLAPSELQSRHSLIREEALQVFRGVKKMGGEEFSRRY
LQQLEGEIDEVFVQYIKHNDSKNIFHAARTPATLFVVIFVMYVAAGITGFVGVDVIASLC
NMILGLALITLCTWAYIRYSGEYRELGAVIDQVAGALWDQGSTNDALYKLYNVAANHRHL
YHHAFPGGPQVDKDAEEQDKKRD
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaacaccgtaaagacagagacagctggggtgagtggtccctcagtgataaaaat
gtctatgactggagctcagaggaggaggagccggatggacgggcccggcccgtgcaggtg
ctgctggtcaaagacgaccacacctttgagctggacgaggtggcgctgagccgcatcctg
ctggcggaggaggtcagagaccgggaggtggtggccatctctgtggccggagctttccgc
aagggcaagtccttcctcatggacttcatgctgcggtacatgtacaaccacgcatctgaa
ggctggctcggagaagcagacgagcctctgacgggcttctcctggagggggggctcagag
agggagaccaccgggatccagatctggagtgaggtcttcctggtggacaagccagatgga
aaaaaggtcgctgtgttgctaatggacacacaaggcacgtttgacagccagtcgacgctg
agggattcggccactgtgtttgcactgagcacaatgataagctccatgcaggtttacaac
atctcacagaatgtacaagaggacgacctgcagcacttacagcttttcactgagtacggc
agactagctatggaagagactttcctcaaaccattccagtccatgattttcctcgttcga
gactggagctttccatatgagtttccctacggacaggagggaggcatgaagttccttgag
aagagacttaagatttcagagaaccagcatgaagagctgcagaacgtgcgcaaacacatc
cactcctgcttcaccaacatctcctgtttcctgatgcctcacccgggcctcaaagtggcc
accaacccccactttgacggaagaattatagagatcgacggcgagtttatcaacaacctg
aaggttctagtcccgtggcttctcagtcctcgtaacatcgacgtgaaggagatcaacggc
agcaaaatcacctgcaggggcctgttggagtactttaaggcatacatcaaaatttaccaa
ggtgaggagctgccacatccaaagtccatgctgcaggccacagcagaggcaaataatttg
gcagcagtagcagccgcaaaggatctgtacaacaagaaaatggagacggtctgtgggggg
gaccggcccttcctggcccccagcgagctgcagagccgacacagcctcatcagggaggag
gccctgcaggtgtttcggggcgtgaagaagatgggaggcgaggagttcagccgccgctac
ctgcagcagctggagggagaaatcgacgaggtgttcgtccagtacatcaagcacaatgac
tccaagaacattttccacgccgcgcggacgccggccaccctgtttgtagtcatctttgtc
atgtacgtggctgcgggcatcacaggctttgtgggcgtggacgtcattgccagcttgtgt
aacatgattctgggtctggcattgatcactctctgcacctgggcctacatccgctactcc
ggggaataccgagaactgggcgccgtcatcgaccaggtggccggtgcactgtgggaccag
ggaagcacaaatgacgctctctacaagctgtacaatgtagcggccaatcacaggcacctg
taccaccacgccttccccggcgggcctcaggtggacaaggatgcagaggagcaggacaag
aagagggactga
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