Etheostoma cragini (Arkansas darter): 117935509
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Entry
117935509 CDS
T07493
Symbol
gabrg1
Name
(RefSeq) gamma-aminobutyric acid receptor subunit gamma-1
KO
K05186
gamma-aminobutyric acid receptor subunit gamma
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
117935509 (gabrg1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ecra04040
]
117935509 (gabrg1)
Ion channels [BR:
ecra04040
]
Ligand-gated channels
GABA-A
117935509 (gabrg1)
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GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
117935509
NCBI-ProteinID:
XP_034713611
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Position
20:22860443..22872656
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AA seq
461 aa
AA seq
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MKRLFVRAVPDKAMNPWLLLALLGLCAAFGPSKQEEEDYEDVPINKTWVLSPKVYESDVT
LILNKLLLGYDNKLRPDIGVRPTVIETAVYVNSIGPVDPINMEYTIDIFFAQTWYDSRLK
FNSSMKLLMLNSNMVGKIWIPDTFFRNSRKSDAHWITTPNRLLRLWSNGRVMYTLRLTIN
AECYLKLHNFPMDEHSCPLEFSSYGYPKNEIMYRWQRRAVEVADQRYWRLYQFAFVGLRN
STDVAHTQSGEYVIMTIFFDLSRRMGYFTIQTYIPCSMIVVLSWVSFWINKDAVPARTSL
GITTVLTMTTLSTISRKSLPKVSYVTAMDLFVSVCFIFTFAALMEYGTLHYFTSNRQTKK
SKSNNNTQQKAPSMVNIRPGTSLLQMNSIVPYHEEADYAYECLDGKDCTSFFCCFDDCRT
GAWRENRMHVRVSKIDSYSRIFFPTAFGLFNLVYWIGYLYL
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgaagcggctttttgtcagagctgtgccggacaaagccatgaacccctggctgcttttg
gctctcctcggactctgtgcagcatttgggcccagtaaacaggaagaagaggactatgaa
gacgtgcccataaataaaacctgggtcttatcaccgaaggtctacgagagcgatgtgact
ttgatcctaaataaactgctgctgggctacgacaacaagctgcggcctgacatcggagtg
aggccgacagtgattgaaacagccgtgtatgtcaacagcattggaccagtggaccccatc
aacatggaatacaccattgacatcttctttgcccagacatggtacgacagccggctgaag
ttcaacagctcgatgaagctgctcatgctcaacagcaacatggtaggcaaaatctggatc
cccgacacattcttcaggaattcccgcaaatcagatgcccactggatcaccactcccaac
cgcctcctgaggctgtggagcaatgggagagtcatgtacacactgaggttgactattaat
gcggagtgttaccttaagctgcataactttccaatggatgaacactcgtgtccactggag
ttttcaagctatggttatcctaagaatgagatcatgtaccggtggcagagacgggccgtg
gaagtggcagaccagcggtactggagactctaccagtttgccttcgtagggttgaggaac
tccactgatgtggcacacacccagtcaggggaatatgtaatcatgacgatcttttttgac
ctgagtcggagaatgggctacttcaccatccagacctacattccctgcagtatgatcgtg
gtcttgtcctgggtctcgttctggatcaacaaggatgccgtcccagctcgcacatctcta
ggtatcaccacagtcctaacgatgacaactctaagcaccatctcccggaagtccctgccc
aaggtttcctacgtcactgccatggacctgtttgtctctgtctgcttcatcttcaccttt
gctgccctcatggagtatggcactctgcactacttcaccagcaacagacagaccaagaag
tctaaatccaacaataacacacaacagaaagcacccagcatggtgaatatccgacctggc
acgtccttgctgcagatgaacagcatcgtgccctatcacgaggaggctgactatgcttac
gagtgtttggatggaaaagactgcaccagcttcttctgctgcttcgatgactgccgcaca
ggtgcttggcgcgaaaacagaatgcatgtgcgggtctccaagatcgattcatactcacga
atattcttccccactgcttttggccttttcaatctggtttattggattggttatctgtat
ctataa
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