Etheostoma cragini (Arkansas darter): 117935552
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Entry
117935552 CDS
T07493
Symbol
atrn
Name
(RefSeq) attractin isoform X1
KO
K24332
attractin
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
ecra04091
]
117935552 (atrn)
Lectins [BR:
ecra04091
]
C-Type lectins
Others
117935552 (atrn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_ATRN-LZTR1
Kelch_KLHDC2_KLHL20_DRC7
GBD_ATRN
Kelch_1
Kelch_3
Kelch_5
EGF_LMN_ATRN
Kelch_4
PSI
CUB
Kelch_6
Kelch_2
EGF_TEN
NANM
EGF_Teneurin
EGF_2
PSI_integrin
EGF_laminin
TMEM100
DUF4842
Motif
Other DBs
NCBI-GeneID:
117935552
NCBI-ProteinID:
XP_034713639
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All DBs
Position
20:complement(1059364..1204300)
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AA seq
1374 aa
AA seq
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MYGATRRACSSSGRGRSLLMLTTALLLSVVGLLTGLPGITDAKECDKPCMNGQCNTATGN
CVCFPGWVGDQCQHCGGRFRLTGPSGHLTDGPGNYKYKTKCTWLIEGQPNTILRLRFNHF
ATECSWDHLYVYDGDSIYAPLLAAFSGLIVPERYGNETVPEVVSQSGYALLHFFSDAAYN
LTGFNISYRVNTCPNNCSGRGECRVRNSTGAAYCECEDNWKGAACDVPYCLADCGYPDRG
HCQGKTCICKTGWQGADCLVSVPANSSFWSREDYAEAGLARASHKAVVDQGIMWVIGGYV
FNASDYHMVKAYNISSKSWLTLDPSVQTVTPRYGHSLALHEGKIYMYGGKIDSTGNVSSQ
LWVFHIQNQTWVLLSPRAKEQYAVVGHSAHIVPPTQEGASPIMLVMFGHCPLYGYISQVQ
EYNIVKNTWSMVSTEGALVQGGYGHSGVFDPSTRAIYIHGGYKAFSANKYGLAGDLYKFD
VDKRKWTILRDSGFFRYLHTAVIVSGTMLVFGGNTHNDTSMSHGAKCFSSDFLAYSLACD
EWTVLPRPDLYHDVNRFGHSAVFSDSVMYVFGGFNSLLLSDVLMYTSPSCAAFSSPASCS
QAWPGIHCVWNSTQGTCLPWESNAIGTEPQPLPASCNTRSYADNERCDQYTDCYSCTANT
NGCQWCSGQCVSLGSNCTSATGAIGDNDVCPKDNPSYVCNKKTSCKSCAVDQNCQWEPRN
QECISLPENVCGESWHLVGNSCLKFITAKDSYDNAKLACRSHNAVLASLTTQKKVDFVLK
ELQIMSVVYRATVTPWVGLRKINVSYWCWEDMSPFTNTSLQWLPGEPSDAGFCGYLAEPA
SSGLKAQTCINPVNGSLCERSANHSAKPCRTPCAMRSTCSECTSSSSECMWCSNMKQCVD
SNAYVASFPFGQCMEWYTMNSCPPENCSGYRTCGQCLDQPGCGWCTDPSNTGKGQCIEGS
YRGPFQTSVPAPSTLPGLPAIPPQPALNASMCPSEAKYNWSFIHCPACQCNGHSQCINES
VCEKCEDLTTGRHCESCVSGFYGDPTNGGSCQPCKCNGHASMCNPNNGKCFCTTKGIKGD
RCHLCEVENRYQGNPLKGTCYYTLLIDYQFTFSLSQEDDRYYTAINFVATPEEPNRDLDM
FINASKNFNLNITWATSFTAGTQTGEEIPIVSRSNIKEFKDSFSNENFDFRNSPNITFFV
YVSNFTWPIKIQIAFSQHSNFMDLVQFFVTFFSCFLSLLLVAAVVWKIKQSCWASRRREQ
LLREMQQMASRPFATVNVALETDDEPPDLIGGNVKSVPKPIALEPCFGNKAAVLSIFVRL
PRGTGGIPPPGQSGLAVASALVDVSQQMCLGYKEKSGGLRNRKQQPTAQPSTCI
NT seq
4125 nt
NT seq
+upstream
nt +downstream
nt
atgtacggggcgacgcggcgggcctgctcgagctctggccggggccggagcctgctgatg
ctgacaaccgcgctactgctctcggtcgtcgggctgctcaccgggctgcctggcatcacc
gacgcgaaggaatgcgacaaaccttgtatgaacgggcagtgcaacaccgctactggcaac
tgtgtgtgcttccccggctgggttggggaccaatgccagcactgcggagggagattcagg
ttgacggggccctccggtcatctgacggacggtccaggaaactataagtacaagaccaag
tgcacgtggctgatcgagggacagcccaacaccatactccgattacgcttcaaccacttt
gccaccgaatgcagctgggaccacctttacgtgtacgacggagactccatttacgctccg
cttctcgctgccttcagtggtctgattgttcctgagcgctatgggaacgagacggttcct
gaggtggtgtctcagtccggctacgccctgctgcacttcttcagtgatgctgcctacaac
cttaccggcttcaacatttcctacagggtgaacacatgccccaacaactgctcaggccgg
ggcgagtgtcgcgtgaggaactccactggtgcggcgtactgcgagtgtgaagacaactgg
aagggggcagcctgtgacgtcccctactgcctggccgactgtggctaccccgacagaggc
cactgccagggaaagacctgcatctgcaagaccggatggcaaggtgcggactgcctggtc
tctgtgcctgccaactcctccttctggagccgcgaggactacgccgaggctgggctggcc
agggcttcccacaaggcagtggtggaccagggcatcatgtgggtcatcggcggctacgtc
ttcaacgcctccgactatcacatggtcaaagcatataacatcagtagcaagagctggctg
acccttgacccctctgtgcaaactgtgacgccgcgatatggccactcactggctcttcat
gaggggaagatctacatgtacggaggaaagatcgactccacaggaaacgtgtccagccag
ctgtgggttttccacatccagaaccagacctgggtcctcctgagccccagggccaaggag
cagtatgccgtggtgggacactcggcgcacattgtgccccccacccaggagggggccagt
cccatcatgctggttatgttcggacactgtcctctgtacggttacatcagccaggtgcag
gagtacaacatcgtgaagaacacttggagcatggtgtcaacagaaggtgcactggtccag
ggtggctacggccacagcggtgttttcgaccccagcaccagagccatctacatccacgga
ggctacaaggccttcagcgccaacaagtacggcctggcgggagacctgtacaagttcgac
gtggacaagaggaaatggaccattctgagagacagcggcttcttccgttacctccacacg
gcggtgatagtgagcgggaccatgctggtgtttggaggcaacacacacaacgacacctcc
atgagccacggcgccaagtgcttctcctctgacttcctggcctacagcctggcgtgtgac
gagtggacagtgctgcctcgaccggacctctaccatgacgtcaatcgctttggacactcg
gcggtcttcagtgacagtgtgatgtacgtgttcggtggcttcaatagcctgctgctcagt
gacgtccttatgtacacctcgcccagctgcgcagccttctctagcccggcatcctgcagc
caggcctggccagggatccactgcgtctggaacagcacccaggggacctgcctgccctgg
gagagcaacgccatcggaacggaaccgcagccgctcccggcctcctgcaacacccgatca
tatgctgacaacgagaggtgtgaccagtacacggactgctacagctgcactgctaacacc
aacggctgccagtggtgttccggccagtgtgtgtctctgggaagcaactgcacctccgcc
acgggggccattggggacaatgacgtttgccccaaggacaacccgtcctatgtgtgcaac
aagaaaaccagctgcaagagctgcgctgtggaccagaactgtcagtgggaacctcgcaac
caggagtgcatctcactgccagaaaacgtgtgcggtgaaagctggcatctggtgggcaac
tcctgtctgaagttcatcacggccaaggactcgtacgacaacgccaagctggcctgccgg
agccacaacgccgtcctggcctcgctcaccacgcagaagaaggtggactttgtcctgaag
gagctgcaaatcatgagtgtagtgtacagggccacagtgactccctgggtggggctcagg
aaaatcaacgtgtcttactggtgctgggaggacatgtcgcccttcaccaacaccagcctg
cagtggctgcccggcgagcccagcgacgccggcttctgtggctacctggccgagccggcg
tccagcggactgaaggcacaaacctgcatcaacccagtgaacggcagcctgtgtgaacgc
tcagccaaccacagtgccaagccgtgccggaccccgtgcgccatgaggagcacctgcagc
gaatgcaccagcagcagctcggagtgcatgtggtgcagcaacatgaagcagtgcgtcgac
tccaacgcctacgtggcctccttccccttcggccagtgtatggagtggtacactatgaac
tcttgtccaccggagaactgctccgggtacagaacatgtggccagtgtctggaccagccg
ggctgcggctggtgcaccgaccccagcaacacgggcaaaggtcagtgcatcgagggctcg
taccgcgggcccttccagacctcggtcccggccccatccaccctccctggcctgcccgcc
atccccccccagccggcgctcaatgccagcatgtgccccagcgaggccaaatacaactgg
tccttcatccactgcccagcttgtcagtgtaacggtcacagccagtgtatcaatgagagc
gtgtgcgagaagtgcgaggacctgacaaccggccggcactgcgagagctgcgtctccggc
ttctacggagatcccaccaacgggggcagctgccagccctgcaagtgtaacggccacgcc
agcatgtgcaaccctaacaacggcaagtgcttctgcaccactaagggcatcaaaggggat
cgctgccacctgtgtgaagtcgagaatcgttaccaaggcaaccctctcaaaggaacatgc
tactacacgcttctcatcgactaccagttcaccttcagcctgtcgcaggaggacgaccgc
tactacaccgccatcaacttcgtggccacacccgaggagccaaaccgggacctagacatg
ttcataaatgcctcaaagaacttcaacctgaacataacctgggccactagcttcaccgca
ggcacccagaccggggaggagatcccgatcgtctctcggagcaacatcaaggagttcaag
gacagcttctccaacgagaactttgatttccgcaacagccctaacataaccttctttgtc
tacgtcagcaacttcacgtggcccattaagattcaaattgccttctcgcagcacagtaac
ttcatggatctggtgcagttctttgtcacgttcttcagctgcttcctgtccctgctcctc
gtggccgccgtggtgtggaagatcaaacaaagctgctgggcgtcacggcgacgagagcaa
ctgctgagggaaatgcaacagatggccagccggcctttcgccaccgtcaacgttgccttg
gagacggacgacgagccgcctgacctgataggtggaaacgtcaagtccgtcccaaaaccc
atcgccctcgagccttgctttggcaacaaagccgccgtgctttccatctttgtgcggtta
cccaggggcaccggcggcatccctcctccaggacagtctggtctggcagtggcgagtgcg
ctggtggacgtctcccagcagatgtgtctgggctacaaggagaagtccggaggcctgagg
aaccgcaaacagcagcccactgcacagccatccacctgtatctga
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