Etheostoma cragini (Arkansas darter): 117935577
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Entry
117935577 CDS
T07493
Symbol
stxbp5b
Name
(RefSeq) syntaxin-binding protein 5 isoform X1
KO
K08518
syntaxin-binding protein 5
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ecra04131
]
117935577 (stxbp5b)
Membrane trafficking [BR:
ecra04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
117935577 (stxbp5b)
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
117935577 (stxbp5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LLGL
WDR55
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
ANAPC4_WD40
WD40
Beta-prop_RIG_2nd
WD40_Prp19
Beta-prop_HPS5
Beta-prop_IFT140_1st
Lgl_C
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
Beta-prop_NUP159_NUP214
EIF3I
Synaptobrevin
Beta-prop_VPS8
RAB3GAP2_N
Beta-prop_Vps41
WD40_like
WDR54
Motif
Other DBs
NCBI-GeneID:
117935577
NCBI-ProteinID:
XP_034713709
LinkDB
All DBs
Position
20:complement(6549777..6587666)
Genome browser
AA seq
1217 aa
AA seq
DB search
MKKFNIRKVLDGLTAASSSSSATAQPGTPRENDVIQETLQSEHFQLCKTVRHGFPYQPSS
MAFDPVQKILAVGTQNGALRLFGRAGVECYCQHESGAAVIQLQFLINEGALVSALADDSI
HLWNLRQKIPAILHSLKFNRERITYCHLPFQSKWLYIGTERGNIHIVNVESFTLSGYVIM
WNKAIELSTKTHPGPVVHISDNPMDEGKLLIGFECGVVVLWDLKCKKADYRYNYDEAIHS
VAWHHEGKQFVCSHSDGTLTTWNIRAQAKSAQIITPHGKQPKDGKKPEPCKPILKVEYKT
TRAGDPFMILSGGLSYDTVGRRACLTVMHGKSTAVLEMDYPIVDFLTLCETPYPNDFQEP
YAVVVLLEKDLVVIDLGQIGYPIFENPYPLTIHESPVTCCEYFVDCPAELIPALYSVGSR
QKRQGYSKKEWPISGGNWGQGTQSYPEIIITGHADGSIKFWDASALMLQVLYKLKTAKVF
ERARSKEEKANTDIVEEDPFAIQTLSWCPESRMLCVAGVSAHVIIYRFSKQEITTEVVQL
LEVRMQCEFSDGDSPDPGGDQTPTLPTPGASSSPQESEPPTQPSTGSNSSDGPRDNKPCL
QVRSSPLKQSPGYQVELVIQLVWVSGEPPQPITSLAINSSYGLVVFGNSNGLAVVDYLQK
TLLLNMGTSELYSPSDPYQRQPRSPRKTRQPSGDNPTKTSCMSRLSYLYSESVKKLRSSH
LTTLDSNDGSNTSEDRCKSPTSGSTSPCNSDDERKQKFIEKVKFTSRRFSKTVANDFAKM
SRKISLSSEQKPDLAEEKFQRWRSLANKKRFCYMNEGKAAARMTQKGAVCRTKSGPNYYA
KDNAFTRSRSSSVTSIDRESREAISSFHFCESFPRKTDSVVSPCLLVGTTQGTVMMVALS
LPPPGDHRLQQPVGISSCGTLVTLKGGILTMALLDATGTLLPPSYEPWYDPNASDEEKEK
SRRRRPASPPSTQEGQDSQFAVLCSEKQAKVVAMPSQTRIYKHNITESSFVLRADVVQMA
GAYCIACFCANGHIMTLSLPSLRPLLDVNYLPLTDMRIARTFCFSNLGQALYLTSPTEIQ
RITYSQETCDNRQEMLSELFTPVETPEAPNKGFFKGLFGGGAQSLDREDLFGETGAGKAS
RSLAQHIPGPGGMEGMKGAASGIVGDLARARIALDERGQKLGELEDRTAAMMSSADSFSK
HAHDMMLKYKDKKWYQL
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagtttaacattaggaaggtgctagacggcttgacagcggcttcttcttcctcc
tccgcaactgcccagccgggtactcccagggaaaacgatgttatccaggagactctccag
tcggaacattttcagctttgcaagactgtgcgtcatggcttcccatatcaaccatcctca
atggcttttgaccctgtccagaaaatcttggccgttgggactcagaatggagcattgagg
ctctttggccgtgcgggtgtggagtgctactgtcagcatgagagcggtgcggctgtcatc
cagctccagttcctgatcaacgagggggcgctagtgagtgccttagctgatgacagcatc
cacctgtggaacctgaggcaaaaaatcccggcaatcctacattctctcaagttcaaccgg
gagagaatcacatactgccacctgcccttccagagcaaatggctctacatcggcacagaa
agaggaaacatccacattgtcaacgtggagtccttcactctctcaggctacgtcatcatg
tggaacaaagccattgaactatccaccaaaacacacccagggcctgttgtgcacatcagt
gataaccccatggatgaaggaaagcttctgattggatttgaatgtggggttgtggtgttg
tgggatttgaagtgcaaaaaagctgactaccgctacaattatgatgaggcaatccactca
gtagcctggcaccatgagggtaaacagtttgtttgcagccactctgatggcactctgacc
acatggaatataagagcccaagccaagtctgcacagatcatcacaccacatggaaagcag
cctaaggacggaaaaaagccagaaccatgcaagcctattctgaaggtggagtataaaaca
acaagggctggggacccattcatgatcctgtctggaggtctgtcttacgatacagtgggg
aggagagcctgtctgactgtgatgcatggaaagagcactgctgtcctagagatggactac
cccatcgtagatttcctaacgctgtgtgaaactccatatccaaatgactttcaggagcct
tatgctgtggtggtgctcctggagaaggacttagttgtaatagaccttggacagattggg
taccccatatttgagaatccatatcctctgactatccatgagtcaccagtgacctgctgt
gagtactttgttgactgccctgctgaactcattcctgcactttactctgtcggcagccgg
caaaagagacaaggttacagcaagaaggaatggcctattagtggaggaaactggggccaa
ggcactcagagttacccagagatcattatcactggacatgctgatgggtcgatcaaattt
tgggatgcttctgcattaatgcttcaagtgctgtacaagctgaagactgccaaggttttt
gagagggcgcgcagtaaggaggagaaggcaaacacagatatagtagaggaggacccgttt
gccatccagaccttgtcctggtgccctgagagcaggatgctctgcgtggccggggtgtct
gcccacgttattatctatcggttcagcaaacaagaaatcaccactgaagttgtgcagctt
ttggaggtgcggatgcagtgtgagtttagcgacggtgactcccctgatccaggaggggat
cagacccccaccctgcccacccctggagcttcctccagccctcaggagagtgagcctccc
actcagccctccacaggcagcaactcctccgacggacctcgggacaataaaccatgcctg
caggtgcggagctccccgctgaagcagtctccgggctaccaggtggagctggtgatccag
ctggtgtgggtgagcggggagccacctcagcccatcaccagcctggctatcaactcctcc
tacggccttgttgtgtttggaaacagtaatggtctagctgtggtggactacctccagaaa
actctgctgctcaacatgggcacatcggagctgtacagcccatctgacccctaccagagg
cagcctcgctcgccacgcaaaacacggcagccctctggagacaatccaactaagacgtct
tgcatgtcccgactttcttacttgtattctgagtctgtgaaaaaactacgttcatctcac
ttgacaaccctcgattccaacgatgggtccaacacctcagaggaccgctgcaagtcacct
acttcaggatccacctcaccttgcaattctgatgatgagcggaaacagaagttcattgag
aaggtgaagttcacaagcagacgcttttccaagacggttgccaatgactttgccaagatg
tcacggaaaattagcttgtctagcgagcaaaagccagacctggcagaagagaagttccag
cgatggcgctctctcgcaaataagaagcgcttttgttacatgaacgaaggcaaggcggcg
gccaggatgacccagaagggggctgtctgtagaactaaatcaggtcccaactactatgcc
aaggataacgctttcacccggtcgcgtagttcaagtgtaaccagcatagacagagagtcc
cgagaggccatctcctcctttcacttctgtgagagttttcccaggaagacggacagcgtg
gtcagcccctgtctgctggtgggaaccacccagggcactgtgatgatggtggccctcagc
ctgccgccccctggggaccacaggctgcagcaacccgttggcatctcctcctgtggcact
ttggtcacactcaaaggaggcattttgactatggccctgttggacgccactggaactttg
ctgcccccttcctacgagccatggtacgacccaaatgcctcagacgaggagaaggagaaa
agccggaggcgcaggccagcctcccctccctcgacacaagagggtcaagattcccagttc
gctgtgctgtgttcggagaaacaggccaaggtggtggccatgccctcccaaacccgcatc
tacaaacacaacatcacagagtcctccttcgtgctgagggctgatgttgtgcagatggcc
ggagcttactgcatcgcgtgtttctgtgctaacggccatatcatgaccctgagtttaccc
agtctacggcctctgctggatgtgaactacctgccgctgacagacatgcggatagccaga
acgttctgcttctccaacctgggtcaggccctgtacctcacctcccccacagagatccag
aggatcacttacagccaggagacctgcgacaaccggcaggagatgctcagtgagttgttt
acccctgtggagacaccagaggctcctaacaaaggtttcttcaaaggcctgtttgggggt
ggcgctcagtccctggacagggaggacctctttggtgaaacaggtgctggtaaggcctct
cgtagcttggcccagcacatcccaggcccaggaggcatggagggcatgaaaggtgcagcg
tctgggattgtgggagatctggcccgcgcccggatagctctggacgagagagggcagaaa
ctgggcgagctggaggacagaacggcagccatgatgtccagcgcagattccttttccaaa
catgctcatgatatgatgctgaagtacaaagataagaagtggtaccagctctga
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integrated database retrieval system
