Etheostoma cragini (Arkansas darter): 117935583
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Entry
117935583 CDS
T07493
Symbol
stag1a
Name
(RefSeq) cohesin subunit SA-1a
KO
K06671
cohesin complex subunit SA-1/2
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
117935583 (stag1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ecra03036
]
117935583 (stag1a)
Chromosome and associated proteins [BR:
ecra03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
117935583 (stag1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_SCC3-SA
STAG
SCD
Cnd3
Motif
Other DBs
NCBI-GeneID:
117935583
NCBI-ProteinID:
XP_034713736
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Position
20:complement(8481250..8525129)
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AA seq
1260 aa
AA seq
DB search
MITSELPVLQDSSNESGATDAVGLSMSMSEIEDPEVKGKKKRGRPGKQAPATNKKPRKTP
VEKAVGVARGRGKANGVAQHNGDSGDPVTLFEVVKLGKSAMQSVVDEWIESYKQDRDLAL
LDLINFFIQCSGCKGTVRIEMFRNMQNAEIIRKMTEEFDEDSGDYPLTMPGPMWKKFRYN
FCEFISVLIRQCQYSIIYDEYMMDTVISLLTGLSDSQVRAFRHTSTLAAMKLMTALVNVA
LNLSIHQDNTQRQYEAERNKIAGKRANEKLELLLQKRKELQENQDEIENMMNSIFKGIFV
HRYRDAIAEIRAICIEEIGVWMKMYSDAFLNDSYLKYVGWTLHDRQGEVRLKCLKALQNL
YTNRELFPKLELFTNRFKDRIVSMTLDKEYDVAVEAIRLVTLILQGSEDALSNEDCENVY
HLVYSAHRPVAVAAGEFLHRKLFSRHDPQAEEALAKRRGRSSPNGNLIRMLVLFFLESEL
HEHAAYLVDSLWESSQELLKDWECMTELLLEEAVQGEEVLSDRQESALIELMVCTIRQAA
EAHPPVGRGTGKRVLTAKERKTQIDDKNKLTEHFIMALPMLLSKYQADSEKVANLLQIPQ
FFDLDVYSAGRMEKHLDALLKQIRLVVDKHIEMDVLEACSKTYSILCSEEYTIMNRVDIA
RSQLIDEMTDRFAHSVEELLQEAEEADDDDIYNVLSMLKRLTAFHNAHDLTRWDLFGSCY
RLLKAGIEQGSMPEQIAVQALQCSHYSVLWQLVKITEGAPSKDDLVALRRVVKSFLAVCQ
QCLSNVNTPVKEQAFMLLCDLLMIFSHQLVSGGREGLQPLVFNPDSTLQNELLNFVLDHV
FIDQDDESQSMEGDEEDEANKIEALHKRRNLLAAFCKLIIYDIVDMPAAADIFKHYMKYY
NDYGDIIKETLSKTRQTDKILCAKTLILSLQQLFNELLQDQGPNLDRTSSHVSGIKELAR
RFALTFGLDQIKTREAVATLHKDGIEFAFKYQNPRGPEFPPINLAFLEVLSEFSSKLIRQ
DKKTVHSYLEKFMSESMSERREDVWLPLISYRNSLLTGGDEDHMSVTSGSSSKAGSVRSK
KGRPPLHKKRIEEESSVEGLWMLRNDTLQTPGALQTPQLTSTVLRENRPAEHMPDPDSEP
GSENDYVHNPQMQMSWLGQQKMEEVNRKDRTGMNYIKARSNQGVRQTVRGLMEDDAEPIF
EDVMMSSRGQLEDMNEEFEDTMVIDLPPSRNRRERAELRPDFFDSAAMIEDESGFSMPMF
NT seq
3783 nt
NT seq
+upstream
nt +downstream
nt
atgatcacctcggagctccctgtcctacaggactcgtccaatgagtctggggcaacagac
gcagtgggcttaagtatgagcatgagtgagattgaagatccagaggtgaaaggcaagaag
aagagagggaggcctggaaaacaagccccggcaaccaataaaaagcctcggaagacaccg
gtggaaaaagctgtgggcgttgcgagagggcgcgggaaagccaacggcgtggctcaacat
aatggagacagcggagatcccgtcactctgtttgaagtggtcaaactcggcaagagtgcc
atgcagtctgtggtggatgagtggattgagtcgtataaacaggacagagacttggcgctg
ctggacctcatcaattttttcatccagtgctcaggttgcaaaggcactgtgaggattgag
atgttcaggaacatgcagaacgcagaaatcatccgcaagatgaccgaagagtttgatgag
gacagcggggattatcctctcaccatgccagggcccatgtggaagaagtttcgctacaac
ttctgcgagtttatcagcgttttgatccgccagtgtcagtacagcatcatctacgacgag
tacatgatggacacggtgatctccctcctcaccgggctctcggactctcaagtgcgagcc
ttcagacacacctccacattagcagcgatgaagctgatgaccgcgctggtgaacgtggcg
ctgaacctgagcattcaccaggacaacacccagagacagtacgaggccgagaggaacaag
attgccggcaaacgagccaatgagaagctggagctgctgctgcagaagaggaaggagctt
caggaaaaccaagatgaaatagagaatatgatgaactccattttcaaaggaatctttgtg
catcgctacagggatgcaattgctgaaatccgagccatctgtattgaggagataggagtg
tggatgaaaatgtacagcgatgcttttcttaatgatagctacttgaaatatgttggttgg
acactacacgataggcaaggagaggtgcgtctgaagtgcctgaaggctctgcagaacctg
tacacaaacagagaactgttccctaagttagagctgttcactaaccgcttcaaggaccga
atagtatcaatgacgctggataaggagtatgatgtggctgtggaggccatccgactggtc
acactcatcctgcagggcagtgaagacgccttgtccaatgaggactgtgagaacgtgtac
cacctggtctactctgcccaccgaccggtggccgttgctgctggagagttcctgcacagg
aaattgttcagtcgtcacgacccacaggcagaggaagcgctggccaagcgtcgagggagg
agcagtcccaacgggaatctcatccgcatgctggtgctcttctttctggagagtgagctt
cacgagcatgcggcctacctggtggactcgttgtgggaaagctctcaggagctgctgaaa
gactgggagtgtatgactgaacttctgctggaagaggccgtgcagggagaggaggtgttg
tcagacagacaggagagcgctctgatagagctgatggtgtgcaccatccgtcaggcagca
gaggcgcatccacctgttggcagaggcaccggcaaacgggtgctgacggcaaaggagagg
aagacccagatagacgataagaataaactgacagagcacttcatcatggctctgcccatg
cttctgtccaagtatcaggcagattcggagaaggtagccaacctgctgcagatccctcag
ttctttgacctggacgtgtacagcgcggggcgcatggagaagcacctggacgccttgctg
aagcagatccggctggtggtggataagcacattgagatggatgtcctcgaggcctgcagt
aagacctacagcatcctgtgctccgaggagtacaccatcatgaaccgcgtggacatcgcc
cgctcacagctcatcgacgagatgacggaccgcttcgctcactccgtggaagagctgctg
caggaggctgaggaggccgatgatgacgatatctacaatgttttatccatgctcaagaga
ctcacagccttccacaatgcgcacgacctgacacgatgggatttatttgggagttgctat
cggctgctgaaggcgggcatcgagcagggctccatgccggagcagatagccgtccaggcc
ctgcagtgctcccattactctgtcctctggcagctcgtcaagatcacggagggggctccc
agcaaggatgacctggtggctctcaggagagtggtaaagtcttttctggctgtgtgccag
cagtgcttgtccaacgtcaacacaccagtcaaagaacaggcgttcatgcttctctgcgac
ctgctgatgatcttcagtcatcagctggtctctggcggcagggagggcctccagccgctg
gtcttcaaccccgacagcactctgcagaacgagctgctcaacttcgtcctggaccacgtc
ttcatcgaccaggatgatgagagtcagagcatggagggagacgaggaagacgaggccaac
aagatcgaggcgctgcacaaaaggaggaatctactcgcggctttctgcaaactcatcatc
tacgacatcgtagacatgcccgctgctgccgacatcttcaaacactacatgaagtattat
aatgattatggcgacatcatcaaggagaccctaagtaaaaccagacagacggacaagatt
ctctgtgccaagacgctcatcctcagtctgcagcagctgttcaacgagctgctgcaggac
caggggcccaacttggaccgaacgtcgtctcacgtcagcggcatcaaggagctggcccgc
cgcttcgccctcaccttcggcctggatcagatcaagaccagggaggctgtcgccacactg
cacaaggatggcatagagtttgcatttaaataccagaatcctcgaggaccagagtttcct
cctatcaacctagccttcctggaggttctgagtgaattttcctccaaactaatccgccaa
gacaaaaagacagtgcactcgtacctggagaagttcatgtcggagtcgatgtcagagcgt
cgggaggacgtgtggctgccactgatctcgtacaggaacagcctgctgacgggtggagac
gaggaccacatgtctgtcacatcgggctccagcagcaaggccggctccgtacgcagcaag
aagggacggccgccgctacacaagaaacgcatcgaggaagagagtagtgttgagggcttg
tggatgttgcgtaatgacactcttcagacaccgggagcgctgcagactcctcagctcacc
tcaacagtcctccgagagaacagaccagcagaacacatgcccgacccggactcggagccc
ggatcagagaacgactacgtacacaaccctcagatgcagatgtcgtggctcggccagcag
aagatggaggaggtgaacaggaaggatcggacgggcatgaactacatcaaggcacgcagc
aatcagggcgtccggcagactgtacgtgggttgatggaggatgacgctgagcccatcttt
gaggacgtgatgatgtcatcgcggggccagctggaagacatgaacgaggagtttgaagac
actatggtgatcgacctgccgccatcgaggaacagacgtgaaagagcagaattaagacca
gacttctttgactctgcagccatgattgaggacgagtcgggtttcagcatgcccatgttc
taa
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