Etheostoma cragini (Arkansas darter): 117935651
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Entry
117935651 CDS
T07493
Symbol
rab11fip5a
Name
(RefSeq) rab11 family-interacting protein 1
KO
K12484
Rab11 family-interacting protein 1/2/5
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117935651 (rab11fip5a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ecra04131
]
117935651 (rab11fip5a)
Membrane trafficking [BR:
ecra04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
117935651 (rab11fip5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
RBD-FIP
DUF4635
RNase_Y_N
Motif
Other DBs
NCBI-GeneID:
117935651
NCBI-ProteinID:
XP_034713867
LinkDB
All DBs
Position
20:649876..678370
Genome browser
AA seq
1493 aa
AA seq
DB search
MSSLTVEEDQKWLPTHVQVTVLRGRGLRGKGKHGTSDVYTIIQLGKEKYSTCVLEKTTEP
EWREECSFELHPGVLENGGRSSYPAGSNELVLIVMHRALIGMDVFLGQAVIQLDKVFHET
RYVKNEWYKLNSKTGKKEKERGDIQVSVQFTRNNLTASMYELVMKDKGVSTFGKLKERIK
GKRRSSEEDSASAVLPSGYGSLYRIRQRLPSDGGGEEDYEDDEGGEARRSKMRTYFLRGK
LRKSSDTRSSTSLGSESSESSSRGGSLSPTAGISVVVSDLSNSPSNSSNLTADNSPEHTE
NTSPKASSLTCEFGDDDGEISIAVPQPTVCVNGSHAYSIQPLDPGSGKPADSLGLGLLQK
SLPLSVSLQNLRPPPDFPKGSIGDGRRWSFDKPGEEEKAAIAAALEQSGPMQGDEEEQSG
QAAQPESASSSSSMAESESQGKKQRRNLFSHGRSESAGKGQSQSKDESEQAPAATEEKHK
GWFGSKDSHSKPSLVVSPKLEPSTDPHPPPFPPRHQPPGPPVDPASVVSPLHHTNPFCYS
QTTLPAMSPCNPFFSLLQHNPFYDDMLTVQPNKPSLPPLPFLSSSRPPIVQLFPQASNPN
PNLAQDKLTTEGSVIGTDAKSEATTKDEKRPLPLVPMEEEKPLSMKLLNPIMYAGELDLD
SEWDESFEAFAAGRLQSPEDLTTDCKAQQNTPGDHPLEHCNDKGASVPITDQNTNVNDAL
HHLPCTEFVFEAHKTIRQTANTNTYHLDTFAQFLETIPEHTSFESDNLALNAFTNSPKLD
ACTETNQANSATNTKSLTDTNMHQAPCHSFSVKLNSSSPDPGSSGLGSSAEEDFLPCLSS
NSDKFSASSSEEAEAQNFESNILCFEKSFDSSVGKNIKPSESEDGSTDRSNGLSLVAVAQ
HTVIQHKDGDEKPALHGSEGSLAQESPVLTHQQPVVAARGTGEDALTQAPNLSDVINSDL
LPKLSELQQKPGVSLQPDNENGEKSIREFSGSVEDFSNVSNDSSRSVSNTTDVMTHTIPV
NKLCSTHPSLHIMTSSPDVKPSLSDSPVGSNSLGGQDASQRSPIPSRLFGDFLNTSHIAS
SPSQDFDNTPLHTWVPDLSSSSFSQSLYVSTDSQDYQTCVSNPSTKSSSGSEPNETLHSV
NSTLCGELSEIETTVDAALGQEDSTSACKPCNEEINQTDQSEESFHGAKDKTPTLEPSFM
IGETFGLLPSPLTDSYMSCNPRTLIEPGVVSQHVVLGDVFSKCPQGQNATLHRSQSEGIL
TPAFDKPLLPSFGSDPGAIQESSSAQPGPDLPSLASFAPYLTPQSSSSPVALCSLPPLAN
ATTRSPTSTAPAAAPKPMLQETQQQQQQQQQQAANQQNSPHPVKPLTTAMLAEEKRTEGR
SVLATGLEKLKSTIHPGRSSEQDTDRKKSAAEGAGSYYHLNHSELVALLVQREAELQRQK
AEFERQKSLLAKREVELKKLKPQVKDLEDYIDTLLVRIMEQKPTLLQVRSKLK
NT seq
4482 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcgctaaccgtggaggaggaccagaaatggttaccgacacacgtccaggtgacg
gtgctgagaggcaggggcttacggggcaagggcaagcacggcaccagcgatgtgtacact
atcattcagctgggtaaggagaaatactcgacctgcgtgctggagaagactaccgagccg
gagtggagggaggagtgctcgttcgagctgcaccccggcgtgctggagaacggcgggcgt
agcagctatccagctgggagcaacgagctggtcctcatcgtaatgcaccgggcgctcatt
gggatggacgtgttcctcgggcaggcggtgatccagctggataaggtctttcatgagact
agatacgtcaaaaacgagtggtacaagctcaactctaagacggggaagaaagagaaggag
cgaggagacatccaagtcagcgtccagttcacccggaacaacctgacagccagcatgtac
gagctggtgatgaaggacaagggcgtctccacctttggcaagctgaaagagcgcataaag
gggaagaggaggtccagcgaggaggactcggcctcggccgtcctaccaagtggttacggc
tccctttaccggatacggcagcggctcccgagtgatggaggcggggaagaggactacgag
gacgatgaggggggcgaggcccggcggagcaagatgaggacctactttctgagagggaag
ctgaggaagtcatcggacactcgttccagcacgtccctgggctcagagagcagcgagtca
tcgtcccggggcgggagcctcagccccacggccggcatcagcgtggtggtctctgacctc
tccaactcgcctagcaacagcagcaacctgacggccgataacagcccagagcacaccgaa
aacacgtcgcccaaggcctcctctcttacatgtgagtttggggatgatgatggcgagatc
agcatcgcagtgcctcagcccactgtgtgtgtcaatggaagccatgcttacagcatccag
cccctggaccccggctcaggaaaacctgcagattctctaggcctgggcctgttgcagaag
tctttgcctctctccgtgtctctgcagaacctcagacctccccccgacttccccaaaggc
tccattggagatgggcgccgctggtcttttgacaagcccggcgaggaggagaaggcggcc
atagcggcggccctggagcaaagcggccccatgcagggggatgaggaggagcagtcggga
caggccgctcagcctgaatccgcctcctcctcctcttccatggcggagtcggaaagccag
ggaaaaaaacagaggaggaacttgttctcccatgggaggagtgagtctgcggggaaaggg
cagagtcagtccaaggatgagtctgaacaggccccagctgccactgaggagaaacacaag
ggatggtttggatcaaaggactcgcacagcaaacccagcctggtggtgtcacctaaacta
gagcccagcactgacccccacccaccacctttcccacccaggcaccagcccccgggtccc
cctgtagatcctgcgtctgtggtttctccactgcatcacactaaccccttctgctactca
cagaccacactgcctgccatgtccccctgcaaccctttcttctctctcctccagcacaac
cctttctatgacgacatgctaaccgttcagcccaataaaccttcgctgcctcctctgccc
tttctctccagttcccggccccccatagttcaactctttccgcaggcgagtaaccctaac
cccaacctggctcaggacaaactaaccacggagggctctgtcattggtacggatgcgaag
agcgaagcaacgaccaaagatgagaaacggcctcttcctctagttcccatggaagaagag
aaacctttaagcatgaagctgttaaaccctattatgtatgccggggagctggacctggat
tcagagtgggatgaatcctttgaagcgtttgcagctggcaggctgcagtctcctgaggat
ctgaccacagactgcaaagcacagcaaaacacacccggtgaccatccactggaacactgc
aatgataaaggagcatcggtacccataacagatcaaaacacaaatgtaaatgacgcacta
catcatctaccttgcacagagtttgtattcgaggcacataaaaccatccgccagacagcc
aacactaacacctatcatcttgacacatttgcacaattccttgagacaatcccagagcac
acaagctttgagagtgacaacttagctttaaatgctttcactaactcaccaaaactggat
gcatgcactgaaactaatcaggctaacagtgctactaacacaaaaagtttaaccgacact
aatatgcatcaagccccttgtcactccttttcagtaaagctcaacagcagctccccagat
cctggttcttcaggtcttggcagctcagcagaagaggatttcctcccttgtctctcttca
aattcggacaaattctctgcatcctcctccgaagaagctgaagcacagaactttgaaagc
aacatcctctgctttgagaaatcctttgattcatctgttggaaaaaatataaagccctca
gaatcggaagatggcagtactgacaggtccaatggtctgtctttagtcgccgtagcccag
cacaccgttattcagcacaaggatggtgatgaaaagccagctttacacggttcagagggg
tccttggcacaggagtccccagtgctcacacatcaacagcctgtggtcgctgcaagaggg
acaggtgaggatgcacttactcaggcaccaaacctttccgatgtcataaactctgacttg
ttaccaaaactctcagaactacagcaaaaaccaggcgtctctttacagcctgacaatgaa
aatggagagaaaagcataagggaatttagcggatctgtagaggatttttcaaacgtgtca
aatgattcctcacgatctgtaagtaacactacggatgtgatgactcatacgattccagtt
aataaactttgctccacacacccatccctacacatcatgacctcctcccctgacgtgaag
ccgagtttgtcggactctcccgttgggagcaatagtttaggagggcaggatgcaagccag
cgttctcctataccatccaggctttttggtgatttccttaacaccagtcacattgcgagc
agtcccagccaagactttgacaacacaccgttgcacacttgggtgccggatctgagcagc
agcagcttttcacaaagcctatatgtcagcaccgactcgcaggattaccaaacttgtgtg
tccaacccgtccaccaaatcctccagcggctcggagccaaatgagacgctgcactctgtg
aactcaacgctctgcggcgagctgagtgagattgagacgactgtggatgctgctttgggg
caagaagattccaccagtgcttgcaagccatgtaatgaagaaatcaaccagaccgaccaa
tctgaagaatccttccatggagctaaggacaagacgccaactcttgagccaagtttcatg
ataggggaaacgttcggtttactcccttcgccactgacggactcttacatgagctgcaat
ccaaggacactcatcgaaccaggtgtggtaagccagcatgtcgtcttaggtgatgtgttc
tcaaaatgccctcagggacaaaacgctacgctacaccgctcccagtccgagggcatactg
acacctgcctttgacaaacccctcctgccgtcctttgggagtgatcccggtgcgatacag
gagtcgtcctcagctcaacccggccctgacctcccctccctggcctcctttgctccctat
ctcactcctcaaagtagtagttcccctgtagcgctctgttccctccctcctcttgctaac
gctacgacgaggtcaccaaccagcacggcaccggctgcggcgccaaagccaatgcttcag
gagacacagcagcagcagcagcagcagcagcagcaggcagccaatcagcagaacagcccc
cacccagtgaagcccctgaccactgccatgctggctgaagagaagcggacggagggccgg
tcagtgctggccaccggcctggagaagctcaagtccaccatccacccagggaggagcagc
gagcaggacacagacaggaagaagtctgcggccgagggcgcgggctcgtactaccacctg
aaccacagcgagctggtggccctgctggtgcagcgggaggccgagctgcagaggcagaag
gccgagttcgagcgtcagaaatccctcctggccaagcgggaggtggagctgaagaagttg
aagccgcaggtcaaagatctggaggactacatagacacgctgctggtgcgcatcatggag
cagaagcccactctcctgcaagtgcgctccaagttaaagtga
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integrated database retrieval system
