Etheostoma cragini (Arkansas darter): 117935654
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Entry
117935654 CDS
T07493
Name
(RefSeq) 5'-3' exonuclease PLD4 isoform X1
KO
K16860
phospholipase D3/4 [EC:
3.1.4.4
]
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra00564
Glycerophospholipid metabolism
ecra00565
Ether lipid metabolism
ecra01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09100 Metabolism
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
117935654
00565 Ether lipid metabolism
117935654
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ecra04131
]
117935654
Enzymes [BR:
ecra01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.4 phospholipase D
117935654
Membrane trafficking [BR:
ecra04131
]
Exocytosis
Calcium ion-dependent exocytosis
Phospholipases
117935654
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PLDc_3
PLDc_2
PLDc
DUF7436
SACK1
RE_NgoFVII
Motif
Other DBs
NCBI-GeneID:
117935654
NCBI-ProteinID:
XP_034713873
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All DBs
Position
20:16365815..16369190
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AA seq
483 aa
AA seq
DB search
MPSMYSSLHDGYVSNKGRSTSCVTLAVVLGCLTVLGILLAIAVLKRPPPHQDHETLPNEA
AGSNFSTDQCSMTLVESIPQHMKYKANVTLGIPLEKAWKDLLSVATDQVDVASFYWTLTG
EDINVNSSSDIPGREILKELEELPSRNVSVRVVTSVPSVRTNSTDLKILKKKGVQVRKVN
FGHLTKGVLHSKFWIVDKKHVFIGSANMDWRALTQVKELGVVVYNCPSLAKDLHKIFQSY
WAMGQSNSSLPQPWPAKYDTAINKHHPLLVKTNNISSRLYLTGSPPSFCPPSRTQDLEAI
VSIISDAQHYVDVAVMEYFPTTRFEKPQRYWPFIDDAIRTAAFERKVKMRMLISCGRDSD
PAMLPFLQSLASMDSPHQDISIQIKLYIVPVGNQSDIPYTRVNHNKYMVTDKVAYIGTSN
WSGDYFVTTAGVGLVISQHAPHPVWRTKALQSQLRAVFERDWNSEFAVHLADLGHHPDCA
LSR
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgccttctatgtatagcagccttcatgacggttatgtttcaaacaaagggaggtcaacc
agctgtgtgacgttagctgtggttttgggctgtctgacagtcctggggatcctgcttgcc
atcgctgtgctgaaaagaccaccaccccaccaagatcatgagacgcttcctaatgaagct
gctgggagcaatttctctacggaccagtgcagcatgaccctggtggagagcatccctcaa
catatgaaatacaaagccaatgtaacgcttgggatccctctggaaaaggcctggaaagat
cttctctccgtggcaacggaccaagtggacgtggcctctttctactggactttaactggg
gaagacattaacgttaactcttcctctgacatacctggaagggagatcctgaaagaactc
gaagagttgccctccagaaatgtttctgtccgagtggtgaccagtgttcccagtgtgaga
acaaactccacagatttaaagatcttaaaaaagaaaggagttcaggtgaggaaggtgaac
tttggccacctgacgaagggtgttctccacagcaagttctggattgttgacaaaaaacat
gtgtttattggaagcgccaacatggactggagggctctcacacaggtgaaggaactggga
gtagttgtctacaactgccccagtctagcaaaggacctacataagattttccagtcctac
tgggcgatgggacagtccaacagctccctgccacagccctggcctgcaaagtatgacact
gccatcaataaacatcaccctctgctggtgaaaaccaataatatctccagcaggctgtac
ctcacgggttctccgccatcgttctgtcctccatcaaggactcaggacctggaggctatt
gtctccatcatctcagatgcccaacactatgtggatgtagccgtcatggagtacttccca
accacacgctttgaaaagcctcagagatactggccgttcattgatgatgccattaggacg
gctgcattcgagaggaaggttaagatgcgcatgctgatcagctgtgggcgggactctgac
ccagccatgctgccctttcttcagtctctagcctcaatggacagcccacaccaggatatc
agcatccaaataaaattgtacattgtgcctgtgggaaaccagtctgatattccatacacc
agggtcaaccacaataaatacatggtgactgataaagtagcctatattggtacctccaac
tggtctggggactactttgtgaccacagctggcgtgggtctggtgatttcccagcatgct
cctcaccctgtatggaggactaaggccttgcagagccagctcagggcagtctttgaaaga
gactggaactctgagtttgctgtgcaccttgctgacctggggcaccacccagactgtgca
ctatcaagatga
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