Etheostoma cragini (Arkansas darter): 117935665
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Entry
117935665 CDS
T07493
Symbol
nfkbiab
Name
(RefSeq) nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha b isoform X1
KO
K04734
NF-kappa-B inhibitor alpha
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04210
Apoptosis
ecra04620
Toll-like receptor signaling pathway
ecra04621
NOD-like receptor signaling pathway
ecra04622
RIG-I-like receptor signaling pathway
ecra04623
Cytosolic DNA-sensing pathway
ecra04625
C-type lectin receptor signaling pathway
ecra04920
Adipocytokine signaling pathway
ecra05132
Salmonella infection
ecra05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
117935665 (nfkbiab)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
117935665 (nfkbiab)
04621 NOD-like receptor signaling pathway
117935665 (nfkbiab)
04622 RIG-I-like receptor signaling pathway
117935665 (nfkbiab)
04623 Cytosolic DNA-sensing pathway
117935665 (nfkbiab)
04625 C-type lectin receptor signaling pathway
117935665 (nfkbiab)
09152 Endocrine system
04920 Adipocytokine signaling pathway
117935665 (nfkbiab)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
117935665 (nfkbiab)
09171 Infectious disease: bacterial
05132 Salmonella infection
117935665 (nfkbiab)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecra03000
]
117935665 (nfkbiab)
04131 Membrane trafficking [BR:
ecra04131
]
117935665 (nfkbiab)
Transcription factors [BR:
ecra03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Ankyrin only
117935665 (nfkbiab)
Membrane trafficking [BR:
ecra04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
117935665 (nfkbiab)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_5
Ank_3
Ank_4
ANK_LRRK2
Urocanase
Motif
Other DBs
NCBI-GeneID:
117935665
NCBI-ProteinID:
XP_034713909
LinkDB
All DBs
Position
20:20021562..20025675
Genome browser
AA seq
321 aa
AA seq
DB search
MDLHRTSILNQMDYSRDSKEGKPAPSTEERLDSGLDSLKEEEYQAVADEIRRLQVECEPP
QHKQHLAVTGELHEWQTQITEDGDTLLHLAIIHEAKDYIRKMIDMSKDTDFLNTQNDQRQ
TPLHLAVITNQADVCQRLLVSGCDPTLVDDSGDTPLHIACRHGNLLCFSVLTQNCQPEHL
HTVMAACNYHGQNCLHLASVQGFLSLVENMVTLGADINAKEQRNGRSALHLAVDQQNLSL
VQLLLKKGADPNLLTSGGHTPFHLTYGRNDDNIRKELYSLTNPDLRELPDSESDNSEEEE
GEDSDDDDDEVGYDDIKWNGH
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atggaccttcaccggaccagtatattaaaccaaatggattacagtcgggattctaaagaa
gggaagccagctccctcgacagaggagcggctcgacagcggtttggactcgctgaaagag
gaggagtaccaggctgtggcggacgagatccgtcggctccaggtggaatgtgagcctccg
cagcacaaacaacatctcgctgtaaccggagaactgcacgaatggcaaacacagatcaca
gaagacggagacacgctgctccacctggccatcatccacgaggccaaggactatatcaga
aaaatgatcgacatgtccaaggacacagacttccttaacacacaaaatgaccaaagacag
actcctctccacctagcagtaataacgaaccaggcagacgtgtgtcagcgcctcctggta
tccggctgcgaccccacgcttgtggatgacagcggggacacgcctcttcacatcgcctgt
cgccacggtaacctgctgtgcttcagcgtcctgacacagaactgtcagccagagcatcta
cacacagtgatggctgcctgcaactatcatggtcagaactgcctccacctcgcctcagtt
cagggtttcctgtcactggtggagaacatggtgactttaggagctgacattaatgcaaag
gaacagcgtaacggtcgcagtgcactgcacctggccgtggaccagcagaatttgtcactg
gtccaactgctgctgaagaaaggagcagaccccaacctcctgacctctggaggccacact
cccttccacctcacatacggtcgcaacgatgacaacatccggaaagaactgtactcactg
accaatcctgacctgagggagctgcctgacagcgaatcagacaacagcgaggaagaagag
ggcgaggactctgatgatgatgatgatgaggtcggttatgacgacattaagtggaatgga
cattag
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integrated database retrieval system
