Etheostoma cragini (Arkansas darter): 117935684
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Entry
117935684 CDS
T07493
Symbol
vti1b
Name
(RefSeq) vesicle transport through interaction with t-SNAREs homolog 1B
KO
K08493
vesicle transport through interaction with t-SNAREs 1
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
117935684 (vti1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ecra04131
]
117935684 (vti1b)
Membrane trafficking [BR:
ecra04131
]
SNARE
SNAP-25[N] (Qb)
Vti1
117935684 (vti1b)
BRITE hierarchy
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Paralog
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GFIT
Motif
Pfam:
V-SNARE
V-SNARE_C
Sec20
DUF745
PKK
Fusion_gly
Exonuc_VII_L
DUF3958
Motif
Other DBs
NCBI-GeneID:
117935684
NCBI-ProteinID:
XP_034713955
LinkDB
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Position
20:complement(5231657..5235692)
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AA seq
229 aa
AA seq
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MSSEEFEKLHEIYKSLYEELKLMPETALKSHGEERKRLVRTFDERQGEAEEVLQGMEEEL
RAAPSSYRNAMSTKLRMYRRDLGKLQRDMKNSAPGFSSSSQTMEGSHRAIYSSSNQQSTH
QQSQRALLLQGTDALNNATQSIERSQRIAAETDQIGTDIIEELGEQREQLDRTRNRLVNT
GENLSRSRKFLRTMSRRLVTNKLLLSIIILMELAILGAVVYLKFFRKQS
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcggaagaattcgagaagttgcacgaaatctataaatcactgtacgaagagctc
aagctaatgccagagacagctctgaaaagccacggagaggaaaggaagaggttggtgagg
accttcgatgagaggcagggggaggctgaggaagtgttacaaggaatggaagaagagctg
cgcgctgccccttcctcttacagaaatgcaatgagtacaaagctgcgcatgtaccgcagg
gatctgggcaagctgcagagggacatgaaaaactctgctcctggctttagttcttcttcc
caaacaatggaaggaagtcatcgtgccatctattcatcatcaaaccaacagagtacacac
cagcagtcccagagagctttgctgctccagggcacagatgctttgaacaatgccacccag
agtattgaacgaagtcagcgcattgccgcggagacggatcagatcggcacagatatcatc
gaggagctaggagagcagagggaacagttggaccgcaccagaaacagattggtgaatact
ggagagaacctcagtcgaagtagaaaatttcttcggaccatgtcacggcggctcgtgacg
aacaagttgctgttaagtatcatcattttaatggagttggccattctaggtgctgtggtt
tatctcaagttcttccgaaaacagtcttaa
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