Etheostoma cragini (Arkansas darter): 117935700
Help
Entry
117935700 CDS
T07493
Symbol
hmgcl
Name
(RefSeq) hydroxymethylglutaryl-CoA lyase, mitochondrial isoform X1
KO
K01640
hydroxymethylglutaryl-CoA lyase [EC:
4.1.3.4
]
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra00280
Valine, leucine and isoleucine degradation
ecra00650
Butanoate metabolism
ecra01100
Metabolic pathways
ecra04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
117935700 (hmgcl)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
117935700 (hmgcl)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
117935700 (hmgcl)
Enzymes [BR:
ecra01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.4 hydroxymethylglutaryl-CoA lyase
117935700 (hmgcl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMGL-like
Terminase_2
Motif
Other DBs
NCBI-GeneID:
117935700
NCBI-ProteinID:
XP_034713973
LinkDB
All DBs
Position
20:18078895..18081839
Genome browser
AA seq
337 aa
AA seq
DB search
MAAVMRLVNRSSLSSAMGQKYVAFSSTAKVKAAGLRAGQALPEKVKIVEVGPRDGLQNEK
TMVPTETKINLIDMLSASGLPVIEATSFVSPKWVPQMADQVEVMKGIDRKPGVSYPVLTP
NLKGFQAAIKAGASEIAIFGAASELFSKKNINCSVDESLQRFDEVMKAAKDAGIPVRGYV
SCVLGCPYEGKVAPEKVAHVAKRLYSMGCYEISLGDTIGVGTPGSMTKMLEAVSREVPVN
ALAVHCHDTYGQALANILVALQMGISVVDSSVAGLGGCPYAQGASGNVATEDVVYMLHGL
GIQTGVDLSKLIDAGAFICRTLNRKTNSKVAQATCKL
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atggctgccgtaatgaggcttgtcaacagaagctctttaagttcagccatgggtcagaag
tatgtggcgtttagctcaacagcaaaggtcaaagcagctggcttaagagcaggccaagct
cttccagagaaggtgaaaatagtggaggtgggacccagagatggtcttcagaatgaaaag
actatggtgccaacagagactaaaataaatttgattgacatgttgtcagcgtcagggctg
ccagtcattgaggccaccagctttgtatctccaaaatgggtgccacagatggcagaccag
gtggaggtgatgaaggggattgataggaaacctggagtgtcttacccggtcctcacccca
aacctcaagggtttccaggctgctataaaggcaggagcttccgagatagccatatttggt
gctgcatctgagctattcagtaagaagaacataaactgctcagtggacgagagtttacag
cgctttgacgaggttatgaaagcagctaaagacgctggaattccagttagagggtatgtt
tcgtgtgttcttggatgtccgtatgaaggcaaggtggcacctgaaaaagttgcacatgta
gctaagcgtctgtactccatgggctgctatgagatctctctgggtgacactattggagtg
gggactccaggtagcatgactaaaatgctagaggcagtgagcagagaggtgccagttaat
gccttggcggtgcactgccacgatacctacggccaggcccttgctaacatccttgtggcc
ttacagatgggaatcagcgtggttgactcgtcagtagctggactgggtggctgtccctat
gcccagggggcttctgggaatgttgctactgaagatgtagtatatatgctgcatggactt
gggattcaaacaggagtggacctctcaaagctgatagatgctggagctttcatctgtcga
accctcaacagaaagaccaactcaaaagtggcgcaggccacctgcaagctgtag
DBGET
integrated database retrieval system
