Etheostoma cragini (Arkansas darter): 117935707
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Entry
117935707 CDS
T07493
Name
(RefSeq) AT-rich interactive domain-containing protein 1B-like isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
117935707
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecra03000
]
117935707
03021 Transcription machinery [BR:
ecra03021
]
117935707
03036 Chromosome and associated proteins [BR:
ecra03036
]
117935707
Transcription factors [BR:
ecra03000
]
Eukaryotic type
Helix-turn-helix
ARID
117935707
Transcription machinery [BR:
ecra03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
117935707
Chromosome and associated proteins [BR:
ecra03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
117935707
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
117935707
NCBI-ProteinID:
XP_034713990
LinkDB
All DBs
Position
20:complement(16764172..16966064)
Genome browser
AA seq
2308 aa
AA seq
DB search
MAAQVASAPTRTNNKNKKLSSGLGPELNSGKSGGGGTVQRTGPMLGAGDGTLNNVDHHRR
NELNMVHSTSTTRNASDGHDKDGHNLTSASVSTNSTSSSMETGLIANHKLKCVGSGDPPQ
SQPPPQQQQQPPQFSQFAPHQQRQIQSNNTVNNNGQGPRGDRVMEHQHHGGKENLLGGQG
EPQQQHMLGKGEGDLTCKPAERMMGTRYEHSNLGPTSNNSEFNNNYYSPRPCYEQHGGQQ
QQSSGMGITHSSAHNSMDNSHEAGYHNSQYNQYPAYRAGYGGGAYGMMGPSGCRQPGNML
MGSNSAGSHGKSPLGTAPGGFQRFPGQTQQQHPSGATPTLNQLLTSPSPMMRGYGGAYQD
YSGSTAQQQAGIGLGKDVGPQYGASTAHGWAGQQRNHPHSMSSGNGGQGLGRTQVSSMDF
MTMKRSQLYSMANNPYSTPQQPGGGPYPPSQPYTSPPPHRYPMSMQGRGQIGMGGMQYPQ
QQHVAPYGQQGMGGYSQQQQAGQQGNPPYFSPSQQTPPGPTQSPYLQPRPPPQQEAQPET
YSSRGPPPGNSGKANNEDGVSQDRPSSLPDLSGSIDDLPTGTEAGLGSAVGGSGGGSSSS
SSSSSSQGEQGGASNQGQSPFSPHASLHLPSQRSGPSPSPVVSPAGSTQSQQSRSGSGPI
SPASGPLANTTAPGSTMAPHSSGNGPEAAHPPITRSPMAQEKGFMSSMQRNQASSQFASP
QSGPPLSPHPLPGGPLYPGMGPYTQSSPSGPYGPQGSLYGHQGNYARPSNYSGPASTSYS
GPGPGMTNSLGMNASSPMHGQGPGQPIPVGRSHGPSSQNRVYPPMAPSSPSMPQPAGPGM
GPPSLGSSNRKAQDSAAAAMPGSANSTHNRQPPYARSPAQMQPLQPTSIHWPTSHPASTH
PPILPPSHSQHYRQGNYQGISQTSTMATTVPYSQPTGNNSSAMGNAQGPAYNMPPSGGMG
MPGDGMMSPDGKPKSDGKDDSGPTNEPHKPKLQDGYSHNNSSSSSQQCVSQPATPGGALP
VPSPLSPSPASLSSYHGDDSDSISSPPWPLKTPASPKANPNSSSLSGERITRLFELGMEP
ERRGWVERYLTFMEERGTPVAQLPVVGKKALDLWKVYIAVREIGGLAMVNKNKKWRELST
NLNVGTSSSSASSLKKQYIQYLFAYECKMERGEDPPADSSSSGSSMAGGDSRKQVKIQPP
SPANSGGSLQGPQTPQSSGSSSTAEAAGDLKPPTPATTPLGQVTPLPPNRSSVSVQDPFS
EVSDPAFQKRATSLPPSAPYQQGLSMPDMMMRMQYDAKDPFAGMRKMAGADPYMPGQMPG
GGMQDMYGRPPSALSMSQRPQYPYGPGYDRRPDHVMGIEGNMGPPGSQNMGPSNSEGSMY
SPSRYPSQQRHDGYSQQYPSMTYGMHPSGMYPQQQQGYKRPMDGMYGPPPKRHESDMYPM
QYANQQPDMYNHYGGGYSGPEHRPIQGQFPYPYPRDRMAPSGQSQHSMMGGGPTPNHATD
GPNMWPSRTDLGYPYPNRQGPPSQMPPYGSMGRDDMDGRPGQEQWHRQSPYMSSSGGLAP
LSSRQPSSYCNSPSMANHLPRAPSPGAFQRSMDSRMSPSKATFMSPMKMAKPGMTLMGSQ
GSGPLGHFLPNLRRDLNYPPGSVEATMPILKPRRKLTSKDTGTPEAWRVMMSLKSGLLAE
STWALDTINILLYDDSTVGSFNLSQLPGFLELIVEYFRRYLIEIFGILEEFEVGTVAEKR
LLDPAADQKEEAIPDQETDCTAQPEPESAPAAETPVEQVGDIVEEALPVTAAPESTEVNG
EEEESKVSIKEDKNEEDREKEGKEEEGEKGAETKTECVDKPVADQEPKPKQASKYDKLPI
KIVQKEDMTEHLGYVTEFTSGLLHWQAGGGDSTAHIQTQFEPRSEPPARADGKTRKENKE
ENKLDDGKKQPLKHITATIDDVLCARVDALSYAHPARSLPSYPFRVHHDGEQDHITLLED
EPRCLDEAPLSTSSPWQDSLAKRCLCVSNIVRSLSFIPGNDLDMSRHPALVLLLGRLLLL
HHQHPERNRWPPSYQRDEQQEQGLSSSKEEWWWECLSLLRENAMVTLANISGQLDLSTYP
DTICLPILDGLLHWMVCPSAEAQDPFPSTAPYSQLTPQRLVLECLCKLSIQGGNVDLLLA
TPPFSRQEKLFTVLVRFVGQRKAQVYREMAVAVLSHLAQGDPTAARAIAMQKGSVGNVVG
FLEDGVSMAQYQQNPHSLLHMGHPPMDPPSINMMCRAAKGLLAMAKVEENKTDFVLYESR
LLDISISSVLNAGVAAIICQVLFHLGKL
NT seq
6927 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgcaagttgcatcggctccgactagaactaataacaaaaataagaaattatcc
agcggtttgggtccggagctcaattcagggaaatccggaggaggagggaccgtacagcgg
actggaccgatgctgggtgccggagatgggactctgaataatgtagaccatcaccgccga
aacgagctcaacatggttcattcaacttccacgactcgcaacgcttcggacggacacgac
aaagatggacataacctcacgtccgcctcggtttcgactaattcaacctcttcctcgatg
gaaacgggtttgatcgcgaaccacaagctgaaatgtgtggggagcggagacccccctcag
tctcaaccgccgccgcagcaacagcagcaaccgccgcaattcagccaatttgcgccacat
cagcagcgacagatccaaagtaacaacaccgtcaataataacggccaggggccccgtggg
gacagggttatggagcaccaacaccacggtggcaaagaaaacctgttggggggccagggg
gagccacagcagcagcacatgcttggaaaaggtgagggggacctcacctgtaaacccgca
gagaggatgatgggtaccaggtacgaacactctaacttggggccaactagtaacaactct
gagtttaataacaactattacagtccaaggccctgttatgagcaacatggcggacagcag
cagcaaagcagtgggatggggataacgcactcctcggcacataacagcatggacaactcc
cacgaagcagggtaccacaacagccagtacaatcagtacccggcgtaccgggcgggctac
ggcggtggggcctacgggatgatgggcccctctggatgccggcaacctggtaacatgttg
atgggcagtaactccgcaggaagccatggcaagtctcccctgggaaccgctccgggtggc
tttcagaggttcccaggacaaacacagcagcagcatccctcaggggccaccccgacactc
aaccaactgctgacgtccccaagccccatgatgcggggctacggcggggcatatcaagac
tacagcggatccacggcgcagcagcaagccggcattggcctggggaaagacgtggggccc
cagtacggagcctccacggcccacggctgggcagggcagcaaagaaaccaccctcattca
atgagttcaggcaacggagggcaaggcctcggcaggacgcaggtgtcctccatggacttc
atgactatgaagcgctcgcagctgtacagcatggccaacaatccctactccacccctcag
cagccagggggcgggccttatcctcctagccagccatacacatcgcctcctccacacaga
tatccaatgagcatgcaggggaggggccaaattggcatgggcgggatgcagtatcctcaa
cagcagcatgtggctccatatggccagcaggggatggggggctacagccagcagcagcag
gcagggcagcagggaaaccctccgtacttcagcccctctcagcagacccctccaggtccg
acccagagcccctacctgcagcctcgaccaccaccacaacaggaagcccagccggagacg
tacagctccaggggtccccccccagggaactccgggaaagccaacaatgaggatggcgtc
tcccaggaccgcccgtccagtctgccggatctgtccggctcgattgatgatctccccact
ggtacggaggctggtctgggctcagctgtcggcggcagtggtggcggctcctccagcagc
agcagcagcagcagtagccaaggggagcaaggaggggccagcaaccagggacagtccccc
ttctcccctcatgcctccctccacctccccagccagaggagcgggccctctccctcccct
gtggtctcacccgcaggctccactcagtcccagcagtcgcgatcaggctctggacccatc
tctcccgccagcggacccttagccaacaccacggcgccaggttccacgatggccccacat
agttctgggaatggcccggaagcagcccacccaccaatcacccgctcacccatggctcag
gagaaagggttcatgtccagcatgcagaggaatcaggctagctctcagtttgcttctcct
cagtccggacctcctttgtccccccaccctttacctggtggcccattgtatcctgggatg
ggtccctacacccagagcagcccttccggcccttatggacctcaaggatcactgtatgga
caccaaggtaactatgctcggccctccaactatagtgggcctgccagtaccagctacagc
ggcccgggccccggcatgaccaacagtctaggaatgaatgctagcagccccatgcacggc
caggggcccggccagcccatacctgtaggacgcagccacggtccaagcagccagaacagg
gtgtacccacccatggctcccagctcccccagcatgcctcagccagctgggcccgggatg
ggccctccttctttgggtagctccaatcgcaaggcccaagattcagcagcagctgccatg
ccaggatctgccaactcaacacacaacagacagcctccatatgcaaggtccccagcccag
atgcagccactccaacccacctccatccactggcccacatcccaccccgcctctacccat
cctcccatcctgccaccctcacattcacagcactataggcaggggaactatcaaggcatc
agccagactagcaccatggctaccactgtcccctacagtcagccaacaggaaacaacagc
tcagccatgggcaacgctcaaggtccagcatacaatatgccaccttcaggaggcatgggg
atgccgggagatgggatgatgagcccagatgggaaaccaaaatctgatggaaaagatgac
agcggccccaccaacgagcctcacaaaccaaagctacaggatggctacagccacaataac
agcagcagtagttcccagcagtgtgtgtcccagcctgccaccccaggtggcgccctgcct
gtgccctcccccctctcacccagcccagccagcctgtcctcctaccatggagacgacagc
gacagcatcagcagccccccctggcccctcaagaccccagcgagtcctaaagccaaccct
aattcctcctccctcagtggggagcgaatcacccgactatttgagctgggtatggagcca
gaaaggcggggctgggtggagcgatacctcaccttcatggaggagaggggcacgcctgtt
gcccagcttcccgttgtgggcaagaaggcgctggatctctggaaggtttacatagctgtt
cgggagattggaggcctcgccatggtaaacaagaacaagaagtggcgcgagctgtccacc
aacttgaatgtgggtacatccagcagctccgccagctcgctcaagaagcagtacatccag
tatctgtttgcctatgagtgtaagatggagagaggagaagatcctccggcagacagcagc
agcagcggcagcagcatggctggaggggacagcaggaagcaggtcaagatccagccaccc
tcacctgctaattcaggcggctcacttcaaggcccacagacgccccagtcctctggcagc
agctctacagccgaggcagcaggggatctgaaaccccccacacctgccacaacccctctg
ggacaggtcacaccactgccccccaacaggagcagtgtgagcgtacaggaccccttctcg
gaggtgagcgacccggccttccaaaagcgtgctacctctctgcccccctcagctccttac
cagcagggcctcagcatgcctgacatgatgatgaggatgcaatatgacgccaaggacccc
tttgccgggatgaggaagatggcaggagctgatccctacatgcctggccagatgcctggt
ggtggcatgcaggacatgtatggtcgacctccttcagccttgagcatgagccaacggccg
cagtatccatacggaccaggctacgacaggagaccggaccatgtcatggggatagagggg
aacatgggtccccctggaagtcagaacatgggaccttctaacagtgagggcagcatgtac
tctcccagtagatacccttcacagcagagacacgatggctacagtcagcagtatcccagc
atgacatatgggatgcatccatctggaatgtacccacagcaacagcagggctacaaacgg
cccatggacggcatgtacggccccccgcccaagagacacgagagcgacatgtatcccatg
cagtacgctaaccagcagccagacatgtacaaccactacggtggtgggtactcaggccct
gaacacagacccatccagggccagttcccctacccttacccccgtgaccgcatggccccc
tcaggtcagagccagcacagtatgatgggtggggggcccacgcctaaccacgcgaccgat
ggccccaacatgtggccatccaggacagatctcggctatccctaccccaacagacaggga
ccaccgtcacaaatgccaccttatggctcaatgggtagagatgacatggacgggcggccc
gggcaggagcagtggcaccgtcagtctccttacatgtcgtcatcaggtggattggctccc
ttgtcctcacgccagccatcttcttattgcaactctccttctatggccaaccacctgccc
agagcacccagcccaggcgccttccagcgctccatggactctcggatgtcacccagcaaa
gcaacgttcatgtcacccatgaagatggctaaacctgggatgaccttgatgggctcacag
ggcagtggaccccttggtcactttcttcccaacctgaggcgggacctcaactacccacca
ggatcagtggaggccaccatgccgattctcaagccccgtcgcaagctcacctccaaggac
actggaacgcctgaggcctggcgcgtgatgatgtctctgaagtctggcctgctggcagag
agcacatgggctctagacaccatcaacatcctgctgtacgatgacagcactgtgggctcc
tttaacctctcccagttgcctggattcctcgagctgatcgtggagtacttccgccgttac
ctgatcgagatctttggcatcctcgaagagtttgaagtggggactgtggctgagaaaaga
cttttggaccctgctgctgatcagaaagaagaagccattcctgaccaggaaacagactgt
actgcccaacctgaacctgagtcagctccggcagcagagacgccggtggagcaagtggga
gacatcgtggaggaagctctaccggtcactgcagcgccagagtcaacggaggtgaacggc
gaggaggaagagtctaaggtaagcattaaggaagacaagaatgaagaggacagagaaaaa
gagggaaaagaagaagagggtgaaaaaggagcggagactaaaacggaatgtgttgacaag
cctgttgcagatcaagaacctaaacctaaacaagccagtaaatatgataagctccctatc
aagattgtccaaaaagaagacatgacagagcacttgggttacgtcactgagttcaccagc
gggctgctacactggcaggctggcggaggtgattccaccgcacacattcaaacacaattt
gaaccccggagtgaaccacctgccagggcagatggaaagacaagaaaagaaaacaaagag
gaaaacaagctggacgatgggaagaaacaaccactgaaacatatcactgctactattgac
gatgttctgtgtgctcgggtggacgctctttcttacgcccaccctgcacgctccttgcca
tcctaccccttcagagtgcatcatgatggggagcaggaccacatcaccttgctggaggac
gagcctcgctgcctggatgaagctcccctctccacgtcctctccctggcaggactcactg
gccaagcggtgcctctgcgtctccaacattgtccgaagcttgtcctttatccccgggaat
gacttggatatgtcacgtcatcctgcactggttcttcttctgggcaggctgctcctgctg
caccaccagcacccagagaggaacagatggccccctagctaccagagagacgaacagcag
gagcaggggctgtccagtagcaaagaggagtggtggtgggagtgtctgagtctgctcagg
gagaatgctatggtcactctggccaacatttcgggtcagctggatctctccacttatcca
gacactatctgcctccccatcttggatggccttctccactggatggtatgcccttcagct
gaagcccaggaccccttcccatcaacagcaccctactcccagctcactccacagaggctg
gtgctggagtgcctctgcaagctgagcatccagggcggcaacgttgacctcctgctagca
acgccgcctttcagccgacaggagaaactcttcaccgtcttggtccgctttgtgggtcaa
aggaaggcccaggtgtacagggagatggcagtggctgttctctcccacctggcacaagga
gaccccacagcggcacgtgccatagccatgcagaagggcagcgtgggtaatgtggtaggc
ttcttggaggatggtgttagcatggcacagtaccagcagaaccctcacagcttgttgcac
atggggcacccccctatggatccacctagcataaacatgatgtgcagagcagctaaaggc
ctgttggctatggctaaagtggaggaaaacaagacagattttgtgctgtatgaaagcaga
ttattagacatctccatttcttctgtgctcaacgctggggtggcagctattatttgccaa
gttctctttcacttagggaaattatga
DBGET
integrated database retrieval system
