Etheostoma cragini (Arkansas darter): 117935767
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Entry
117935767 CDS
T07493
Symbol
alms1
Name
(RefSeq) uncharacterized protein alms1 isoform X1
KO
K16741
alstrom syndrome protein 1
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ecra03036
]
117935767 (alms1)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ecra03037
]
117935767 (alms1)
Chromosome and associated proteins [BR:
ecra03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
117935767 (alms1)
Cilium and associated proteins [BR:
ecra03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
117935767 (alms1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ALMS_motif
Motif
Other DBs
NCBI-GeneID:
117935767
NCBI-ProteinID:
XP_034714113
LinkDB
All DBs
Position
20:complement(498249..515630)
Genome browser
AA seq
2288 aa
AA seq
DB search
MEPAERVGESPQMPGDEDASQAVGHASMDQLEGQSPSTASQDQRQPTLETHDWDLQQGRS
FQQDFQDSNLSPALSLMPVNFTEYSLFQQSDNEFAPLRAYPDISMATERFHVPPQDRTTQ
ASECGSLSQHPLAQATTLSEDEVSSCCSLSQHSLSLINEGRQEETVHSPMIATTDRQGVP
SRDDKGSREKDLLTLTDPPDKPVGEADEDEAFFLSKNIPAQHLLDLLQKDISMASSSSAF
SSASKTSVKSSASFSGESKSTQVCKPGIDQSMVRREGPPGEVSLSQQLTQQPDRDLYPDQ
LQTLSSVCNITMGSRSTKPDDSSELLHRELLSEVERRSSREAESKDQQGKSPTPPGQSLT
QCSTGMPEGKPSVTRTNMGDLQLTGPFSSGVERGHRKQDLWFSGNQTGIDGSYLGFLPQS
QSTPGFFKDPPKSSVKAKLGQLSDIESNKESSYQSNTEIFPEPAAPVADVHRPDTANLSQ
EEATSPEVQSLPSLNYMQKVDAWRANQSSGKTSLFDSLALQGFSGISPKKKAYEAVSDSL
NHILSQQAKSLQQPVSSAANQKVSQSSSMAPSGSSTRRGEAVGGAPIDKDNTGSVTRPSA
STFGRSQSQSSLSTTVRSVQKDQQKRHEEKGNSQTQDNGHHQPNVPVQPLPHVSLSQFSD
VSLDHSFTLSSSQDSYNSGIKLGASIGASSVVSLEVDNYAPYWTSKQLTPPLPKPRELNI
EERIPLYLHNLGIDQSPSTILTPFVPRGPIREPEFSPTDLCTIKGSIGTPTKSTQIAEGG
SPNKGQFSRSSILSVDSSISIPLSLDSLHPGATAPGQTRRAFPSSDTEAIQSKHRQSPSS
LPEKDTYPSTQHQHRDSCSTGSQHTIQLVDCFGSDPSLATRARWGERDLDSPLQTSRSLE
EQSAEDSMVSSKALLEIRQLLSQAGNVLSAGSSGGFSASTAPSSLLADDIFLSLKRKTCK
LQDSLLSCANEDPKTRTSLLCARSSSDSMLTSEKVRESSIGRESMTSLEQHNYSSTQALV
PAPAEGAHRRPQESTASRGADSALVLSQSARRAEPEGCSAAPPDNTVPPQPSVIAPLPVL
STETFTSTPTDIVVVTEEEKRTTPEGPVQSSSSLPILEDSDQEVMSNGSSEGSLAVRVAK
LLQSESPATVVSSTPSITDQEESKAREWIKLKLSGQQCEPLELDKEDRKRIEEIKRELLL
KYPMKSQGSTDTESSTASSIRVQMVQDASWQAPLLKAVNVNNQPSQPLPGLHTAHLDSSM
QLKKKTFPDLEAQICEIAAREGVTLPKKNPQALTSITIATRRRSSSSSPSTSPAPPLSPA
PGLLHLAELSTEPVELPIANRQLSHTIADEDEVTKELESAFEPCSSRNQNLTSTSAPVNQ
KRQDAIGGQFKESAPPSQGLGGEDVNAMNTQLFMGDELSVQNSSCSGVCHEAEQATGSST
SESPARTGHVSHVHLTLSPKATDHTSSTAVHPIHAVAVTGLLRKESTPLRQTSSAACSPD
EGVGLSSPPEWYDVTKPIRHQVPKRPETSTLFKTTVPQGRMTLTSTQSSAPCHRVVVSQK
NLTTETPAVPVLLPYKPCGSEELFYIPQRETDNSSTNHSDTTMESSHTGSDDAVPPRFSS
EVLGHQDTGLDRGVTIRHSEGIYSKRLKTATFKMHESGHRGASISADGLSQTSLIQAPKQ
SSQVSAAFTRVPLSSNQEVSKRDQATSPMQFPSYDQPKPSRVRFHVDLAYNKASHHLDQS
PATQAEGERDWEKRYSGLHHPTSKQSSSTLDQLWKRFCDQWSLEQSQPTSDREASLLERL
ERLSRLINNRRGTCVTELQEENLRRGQDAMGNKTQKDGVVKRSVGREARGRNVEGEPPVP
HQTWTQSLQVDETSEPTDDNRDSSISSFSQGSSQSQHLCPADRDESETLSTMSSSMSTVD
TARLIRAFGAHRVQHLKTSSSLSKLYSTINKQKEGREQRRGGNKEPPYIITLSETTGTDE
SIVAADSASTSTYTLPSHSGPSRTLAAKKTVKLVSRSIQAGNLDIVRNGTRRHTRDVGTT
FPSPGEARTSRQISSSLEKGRGRQRSPAKSQGLQKQSKRSTPKTYPKGVSWFISADNLRS
EVSKENQPEEDELLWRQSTAWFEPYSRINPWREPLRQRQVHEDRNELDEPHLDPITKTMS
SGLARISLQEALEMHRPEFISESRQRVKRMVLQAQERKLQANFCRERDELFSWLGGPRRP
AGPALLRRAVPRKEMILRSKQIYENLPEVQRRREEERRKAEYRSYRLNAHLYNKRITNHV
LGRRTAWQ
NT seq
6867 nt
NT seq
+upstream
nt +downstream
nt
atggaacccgcagagagggtgggggaatctcctcagatgccaggggatgaagatgcgagt
caggctgttggacatgcatccatggatcaactagaaggtcagagtcctagcactgccagt
caggaccagcggcagcccacgctggaaacacatgattgggatcttcaacaagggcgctct
tttcagcaagattttcaggacagtaacctgtctccagccctttcactgatgcccgtaaac
ttcactgaatattctttattccaacaaagtgacaatgagtttgcccctttaagggcatac
cctgacatttccatggcaacagagaggtttcacgttccaccccaggatcgcactactcaa
gcctctgaatgtggctcactgtcccagcaccctttggcccaggcaaccaccctgtctgaa
gatgaagtaagcagctgctgctctctgtcacagcacagtttgtcactaataaacgaaggc
agacaagaggaaactgttcactccccaatgattgccaccactgacagacagggagtacca
tccagagatgataagggtagcagagagaaggacttattgacactaactgaccctccagac
aagccagtaggagaggctgatgaagatgaagcattctttctgagtaagaatattcctgcc
cagcatcttctggacctccttcagaaagatataagcatggcaagtagtagcagtgctttt
tcatctgcctctaagacctctgtgaagtcttcggcctctttttccggagaatctaaaagc
actcaagtttgcaaaccaggcattgaccaaagcatggttagaagagaaggtcctccaggt
gaagtttctctttcccagcagctcacacaacaacctgacagagatttatatcctgaccaa
ttgcaaaccttgtcgtcggtctgtaacatcaccatggggtctcgtagtactaaacctgat
gacagtagtgaattgttgcacagagagctgctttctgaggtggagaggcgcagtagccgt
gaagctgaatctaaagaccaacaggggaaaagtcctactccacctggtcaatcgctcaca
cagtgttccacagggatgcctgaaggcaagccaagtgtgaccagaacaaatatgggtgac
ctgcaattgacaggaccgttttcatcaggtgttgaacggggtcacagaaagcaggacctc
tggttctcagggaaccaaacagggattgatgggtcctacctgggttttcttccacagtct
caatccactccaggttttttcaaggacccacctaaatcaagtgtcaaggctaaattagga
caactctctgacatagaatcaaataaagagagctcttatcagtcaaacacagagatcttt
ccagagccagctgctcctgtggcagatgtccatcgcccagacacagcaaatctgagccaa
gaagaagctacctctccagaagtccagtctctcccaagtctcaactatatgcagaaagta
gatgcttggagggcaaatcagagttcaggcaagacgtcactatttgatagcttagcactg
caaggtttttctggcatctctcctaaaaagaaagcttacgaagcagtgtctgactccctt
aatcacatcctgagtcagcaggcgaaaagtttacaacagcctgtttcaagtgctgccaat
cagaaagtctcacagagctcttccatggctccttctggctcttctacaagaagaggggag
gcggtaggcggtgctcctattgataaagataacactggctctgtaacaagaccctctgcc
tcaacctttggcaggtcacagtcccaatcatctcttagcaccactgtcaggtcagttcag
aaagatcagcaaaaaagacatgaagaaaaggggaatagtcagactcaggacaatggccat
catcagccaaatgtccctgttcaaccgttgcctcacgtaagcctaagccagttcagtgat
gtgtcacttgatcacagttttacactctcaagttcccaagatagttacaacagtggaatt
aagttgggagcttccattggcgcttcttctgttgtcagcctagaagttgataactatgcc
ccgtactggacttcaaaacaattaacaccacctctacccaaaccgcgagagctcaacatt
gaagaacgaatcccgttgtatctccataacctaggcattgaccagtcaccctcaacaata
ttaactccatttgtacccagagggccgatcagagagccggaattctctcccactgacctt
tgtacaattaaaggatctattggaaccccaaccaagagcacccaaatagctgaaggtgga
agtcccaataagggacagttttctagatccagcattctgtcagtggactccagtatatcc
atacctttgagcctggacagtcttcatccaggtgctactgccccagggcagaccaggcgt
gcttttccttcatcagatacagaagctatccagagtaaacacagacaatccccctcttcc
ctccctgaaaaagacacttatccttccactcagcaccagcacagggatagctgctcaact
ggcagccaacataccatccagctagtagattgttttggctctgacccctcattagctacc
agggctaggtggggggaaagagacttggattcacccttgcaaactagccggagtttggag
gagcaaagcgccgaagattctatggttagctccaaggccttgttggagattcgtcaacta
ctctctcaggcggggaatgtgctttctgctgggtcctctgggggtttctcagcttccact
gcaccttccagtctgcttgctgatgacatcttcctttcactgaaaaggaaaacctgcaaa
ctccaggactccttattgtcctgtgctaatgaggatcccaaaactcgaacctccctgctg
tgcgctaggtcctcatctgattccatgctgacctcagagaaagtaagagaaagttccatt
ggtcgagagagtatgacctcattggaacaacataattattcatccacccaagctcttgtt
cctgcaccagccgaaggtgcacacagaaggccacaagaaagcactgctagtagaggtgca
gattcagcccttgtactctcccagtcagctcgacgggcagagcctgaaggctgcagtgca
gctcctcctgacaacacagtcccaccgcagccttcggtcattgcgcctttaccagttttg
agtacagaaacgttcacttctactccgacagacatagtggtcgtcacagaggaggaaaaa
cggactactccggaaggccctgtacaaagtagttcctccttgcccatcctggaggattct
gatcaggaagtgatgagtaatgggagtagcgagggctcgctggcagtcagagtagccaag
ttactgcagagtgaatctccagccaccgttgtgtccagtacacccagcatcactgaccag
gaggagagcaaagccagagagtggattaaactgaaactttcaggacagcagtgtgaacct
ctggagttggacaaagaagacagaaagcggattgaagagatcaagagagagctgctgtta
aaataccctatgaagagtcaagggagcacagacacagagagcagtacagcatccagtatt
agagtccaaatggtgcaggatgcatcttggcaagcgccattattgaaggcagtgaatgta
aacaaccagccatctcagcctctgccgggcctccacacagctcacttggactccagcatg
cagctaaaaaaaaaaacgttcccagatctagaggctcagatatgtgagattgctgccaga
gaaggggtaaccctccctaagaaaaaccctcaggccctaacatctattaccattgccact
cgcaggcggtccagctcctcctctccatccacgtctcctgcacctcccctcagtccagcg
ccagggctgctccacctggccgagctctcaacagaaccggtcgagcttcctatagctaac
aggcagctttcccataccattgctgatgaagatgaggtgaccaaagagctggaatcagcg
tttgaaccctgcagtagcagaaaccaaaatctgacctctacgtccgcaccagtgaatcag
aagaggcaagacgctataggaggccagtttaaagaatctgccccaccctcacagggttta
ggtggagaggatgtgaatgcaatgaacacccagttgtttatgggagatgagttatctgtc
cagaacagctcttgttctggtgtttgtcacgaagcagagcaggccacaggttcctccaca
tcggaatccccagccaggacgggtcacgtctcacatgtccatctcactctgtcccctaaa
gccactgatcacacctcttccactgctgtccaccccattcacgctgttgctgttacaggg
ttgctacgtaaagaatccacccccctcagacaaacctcttctgctgcctgcagtccggac
gaaggtgtcggattgtccagtccaccagagtggtacgatgtcacaaagccaataagacac
caggtgcctaaaagacccgagacctccacccttttcaaaaccactgtgcctcagggaagg
atgaccctcacatccacacaatcctctgcaccatgtcacagagtggttgtgtcacaaaaa
aacttaaccactgaaacaccagcagtgcctgttctgttaccttataaaccctgtggcagt
gaggagctcttctacatccctcaaagagaaaccgacaactcctctaccaaccattctgac
accaccatggagagctcccatacaggttcagacgacgctgtgcccccacgcttcagcagc
gaggtcctcgggcaccaagacactgggttggaccgtggagtcaccatcagacactcagag
ggcatctacagcaagaggctgaaaacagccacctttaaaatgcatgagtcaggacacaga
ggtgcctctatatcagcagatggactttcacaaacaagtttgattcaagctccaaagcag
tcttctcaggtatcggctgcctttaccagagtgcctttatcaagcaaccaagaagtctcc
aagagagaccaggcgaccagcccgatgcagttccccagttatgatcaaccaaagccgagc
cgtgtgagatttcatgtggacttagcctacaacaaggcgagccatcacctggatcaaagc
cctgctactcaggcagagggggagcgcgactgggagaagaggtactctggcctccatcac
cccacttccaagcagagcagcagcactttggaccagctgtggaagaggttctgtgatcag
tggagcctggagcagtcccaacccaccagtgacagagaggcatcgctgctggagcggcta
gaacgcctgtcccgtcttattaataacagaaggggcacttgcgtgacagaactacaagaa
gaaaatctaaggaggggacaagatgctatggggaacaaaacacagaaggatggagtagta
aagaggagcgtaggtcgtgaggccagaggtagaaatgttgaaggggaacctcctgtccct
catcagacctggacacagagcctacaggtagatgaaacttctgaacctacagatgacaac
cgtgactcctccatctccagcttctctcagggctcctcccagagtcagcacctctgtcct
gcagatagagacgagtcggagaccttatccactatgtccagctccatgtccaccgtggac
acagcgcggctgatccgagcctttggcgcccaccgagtccagcacctgaaaacgagctcc
agcctcagtaaactgtacagcaccatcaacaagcagaaggaagggagggagcagcgcaga
ggaggaaacaaagagccaccttacatcatcacactgtcagagaccaccggtactgatgaa
tccatagtggctgctgattctgcatcaaccagcacttacactcttccgtcacacagtggc
ccctccaggactctggcagccaagaagactgttaaactggtcagcagaagcatccaggca
ggcaacctggatattgtccgtaatgggactcgacgccacaccagagatgttggaaccaca
ttcccttcgcctggtgaagctagaacttccaggcagatttcatccagcttagagaaggga
agaggcaggcagaggagcccagctaagagtcaggggttacaaaaacagagcaagagaagc
acgccaaagacctaccctaaaggtgtttcatggttcatctctgctgacaacctgaggtct
gaagtgagcaaggagaaccagccagaggaagatgagttgttgtggaggcagagcactgcc
tggtttgaaccatacagcagaatcaatccatggagagaaccactgagacagagacaagtc
catgaagacagaaacgaacttgatgaacctcatttagatccaataaccaaaacaatgtct
tctggtttggcacggatctctctccaggaggctctggagatgcatcgtccagagttcata
tctgagtccaggcagagggtgaagcgcatggttctacaagcgcaggagaggaagctacag
gccaacttctgcagagagagagatgaactcttcagctggcttggaggaccacggaggcct
gcaggccctgctctgctcaggagggctgttcccaggaaggagatgatactgagatccaaa
cagatttatgagaatcttccagaggtgcagaggaggagagaggaggaaagaagaaaagca
gagtatcgatcttaccggctgaacgctcatctatacaacaagagaataactaaccatgtc
ctgggaagaagaacagcctggcagtga
DBGET
integrated database retrieval system
