KEGG   Etheostoma cragini (Arkansas darter): 117935797
Entry
117935797         CDS       T07493                                 
Symbol
larp1b
Name
(RefSeq) la-related protein 1B isoform X1
  KO
K18757  la-related protein 1
Organism
ecra  Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:ecra00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ecra03019]
    117935797 (larp1b)
Messenger RNA biogenesis [BR:ecra03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     117935797 (larp1b)
SSDB
Motif
Pfam: LARP1_HEAT La
Other DBs
NCBI-GeneID: 117935797
NCBI-ProteinID: XP_034714189
LinkDB
Position
20:complement(1882866..1914791)
AA seq 1094 aa
MSTEVEYSQVGPGLTAASFGGAEDKNQNKSEGAREHEEKPQKGSGKQPAEDHSSEGAKSP
TDTHKKCKENDKENDQSSNADSAVEAVKRKVVEAPPPKVNPWTKRTTGRVPSNNINSSSQ
EKDQQNALKVVRASKPRTRKSSKSSDFSDITNWPTPGELAKEQQQNVLNNNGKKPPASRR
EKEKKRDGMERESESSHDGGESKENQEAQLDLLREPPKDAESKAGPDTKSACLKKRGGEG
NKRKWVSLPLEEGSRDDGDKTPGGGPARADTEPTSNTADPTSPNHTLHNNRAHDSSRSWR
REPRDFGDDAASVRSDNGTVHGGIRGRGKGRGRGRGRGRGRYEYSQSFRDSQSSDGSVQA
PSEFGSNMVYYYDDGSKVQMYTVDEKLLKEYIKRQIEYYFSLHNLERDFFLRRKMDTQGF
LPISLIASFHRVQALTMDVSLIMEALKSSKEVELVDDKVRCKIEPERWPIPAPTVVGSPR
TDFSQLINCPEFVPRQTLNSTNSASSPVKKTPESAEPRDSSEGALPAEDAPKPDPEAWIQ
VEKRHRQPSGKHVSDDVCVVGSTPLSALQPGLLPSAERGEAPPCSHPARPHAPPDQEELD
FLFDEEMEQMAPRKNRFTDWSDEDDSDDELDDQDVNKILIVTQTPPYIRKHPGGDRTGNH
ESRAKLTTDLAKAINDGLFYYEQDLWKGDESFESTKQEVEGFKKITVISKDEFDTLTPKV
PVDPNQEVPPPLMPEGAASVDSGAELAHSLPTSVPESPIAHQPRTPRTPRTPGRQDPNKT
PRFYPVMKESGTIDGQTPRKKKTRHSSNPPQEAHIGWVMDSREHRPRSASISSSNASPSE
GAPLAGSYGCTPQSLPKFWHPSHELLRDNGFTQQGYHKYLRRSINERKRLGIGQSQEMNT
LFRFWSFFLRDNFNRKMYEEFKLRALEDAKENYRYGLECLFRYYSYGLEKRFRLDLFKDF
QEETLKDFERGQLYGLEKFWAFLKYSKIKNQPIDPKLKEHLSQFKNLEDFRVVPPMGEEG
GRRRRLSSSAGDEGRRRRHPSNTTSKPTQASKPSASAAAAAQNAPKENAQKPATAQGKKP
ESGAGKKDSAAPNK
NT seq 3285 nt   +upstreamnt  +downstreamnt
atgtccacagaggttgagtatagtcaggttggtccgggtttgacagcggccagcttcggc
ggagcggaggacaagaaccaaaacaagtccgagggggctcgagaacacgaagaaaagcca
cagaaaggctcgggaaagcagccagcggaagaccacagctccgagggagcgaagagcccg
acggacacgcacaagaaatgcaaagaaaacgataaagaaaatgaccaaagcagcaatgct
gactcggctgtcgaggcggtgaagaggaaagttgtcgaagctcctccgccgaaagtcaac
ccctggactaagaggaccacgggcagggtgccaagcaacaatatcaactccagctcccaa
gagaaagatcaacaaaacgctctgaaggtcgtgcgtgccagcaagcccagaacgagaaaa
tccagcaagtcgagtgacttcagcgatatcaccaactggcccacacctggtgaactggcc
aaagagcagcaacaaaatgtcctcaacaacaacgggaagaagcctcccgcctcacgcaga
gagaaggagaagaagagggatggcatggagagagagtctgagagcagccatgacggcggg
gagagcaaagagaaccaggaggctcagctggacctgcttagagagccgcccaaagacgca
gagtccaaggcgggaccggacaccaagagcgcctgcctgaagaagaggggaggtgagggt
aacaagcgtaagtgggtatccctgccgctggaggaagggtcccgggacgacggcgacaag
acgcccggcgggggtccggcacgcgcggacacagagcccaccagcaacacagccgaccct
acgtcgcccaatcacacactccataataacagggcgcatgatagcagcaggagttggaga
agagagccgcgggacttcggggacgatgccgccagcgtccgaagtgacaacgggaccgtt
cacggaggaatccgaggccgagggaaaggtcgagggcgcgggagaggccgcggacgaggc
cgctatgaatactctcagagcttccgggactctcagtcgtcggacggctcggttcaggcg
ccctccgagtttggcagcaacatggtttactactacgacgacggcagcaaggtccagatg
tacacggtggatgagaagcttcttaaagaatacatcaaacgccaaattgaatactacttc
agcctccacaacctggagcgagacttcttcctgaggagaaagatggacacgcagggcttc
ctccccatctccctcatcgccagcttccacagagtgcaggccctcaccatggacgtcagc
ctcatcatggaggccctaaagagcagcaaagaggtggagctggtggacgacaaggttcgc
tgtaaaatcgagccggagcgctggcccatccccgcccccaccgtcgtgggttcccctcgg
accgacttctcccagctcatcaactgtcccgagttcgttcctcgacagaccctgaactcc
acaaactccgcttcatcgcctgtgaagaagactcctgagtccgcggagcctcgggactcc
agcgagggggccctcccggccgaagacgcccccaagcctgaccccgaggcctggatccag
gtggagaaacgccaccgacagccctccggaaagcatgtcagtgatgatgtgtgtgttgtc
ggctctactcctctctcagcgctccaacccggcctcctcccctctgcagagcgcggcgag
gctccgccatgcagccacccggcccgtccgcacgccccgccagaccaggaggagctggac
ttcctgttcgacgaggagatggagcagatggcgcccaggaagaaccgcttcaccgactgg
tcggacgaggacgactcggacgacgagctggacgaccaggacgtcaacaagatcctcatc
gtcacccagacccccccgtatatccgcaagcaccccggcggtgaccggacgggcaaccac
gagtcccgcgccaagctcaccaccgacctggccaaagccatcaacgacgggctcttctac
tacgaacaggacctgtggaagggagacgagtcctttgagagtaccaagcaggaagtggag
ggcttcaagaagatcaccgtcatcagtaaagacgagtttgacactctcacccccaaagtg
cccgttgaccccaaccaggaagtcccgcctcctctcatgccagaaggtgccgcgtccgtg
gacagcggcgccgagttggcccactctctgcctacatcggtcccagagtcgcccatcgct
caccaaccccggacgcccaggacgccccgcacccccgggcgccaggaccccaacaagacg
ccccgcttctaccccgtcatgaaggagagcggcaccattgacggacagacgccgaggaag
aagaagacccgccacagttcgaaccctcctcaggaagcccacatcggctgggtgatggac
tcccgtgaacaccggccgcgctccgcgtccatcagcagctccaacgcctctccgtcagag
ggcgctccgctggcagggagttacggctgcaccccccagtccctgcccaaattctggcat
ccatcccacgagctgctgagggacaacggcttcactcagcagggataccacaagtacctc
cggcggagcataaacgagaggaaacggttggggatcggccagtctcaggagatgaacact
ctattcaggttctggtccttcttcctgagggacaacttcaacaggaagatgtacgaggag
tttaaactacgtgcgctggaggacgccaaagagaactacaggtacggactggagtgtctc
ttcagatactacagctacggtttggagaagagattccggttagatctattcaaagacttt
caagaggagaccctcaaggactttgagagaggtcagctgtatggactggagaagttctgg
gccttcctaaaatactctaagataaagaaccagcccatcgacccaaagctgaaggaacac
ctctcccagttcaagaacctggaggacttcagggtggtgccgccgatgggagaggaggga
ggccggaggagacgtctgtcatcctcggcgggggatgaagggaggcgtcggcgacatcct
tccaacactacctcaaagcccacgcaggcctccaagccatccgcctccgccgctgctgcc
gcacagaacgcacccaaagagaacgcccagaaacccgccaccgctcaggggaagaagccc
gagtctggagccgggaagaaggacagcgctgcaccaaacaaatga

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