Etheostoma cragini (Arkansas darter): 117935875
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Entry
117935875 CDS
T07493
Symbol
zcchc7
Name
(RefSeq) zinc finger CCHC domain-containing protein 7
KO
K12597
protein AIR1/2
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
117935875 (zcchc7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecra03019
]
117935875 (zcchc7)
03016 Transfer RNA biogenesis [BR:
ecra03016
]
117935875 (zcchc7)
Messenger RNA biogenesis [BR:
ecra03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
117935875 (zcchc7)
Transfer RNA biogenesis [BR:
ecra03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
117935875 (zcchc7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCHC
zf-CCHC_2
Motif
Other DBs
NCBI-GeneID:
117935875
NCBI-ProteinID:
XP_034714354
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All DBs
Position
2:complement(16143936..16195171)
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AA seq
659 aa
AA seq
DB search
MYCTYQDRKELEDDLYQEDERDSEGSEVNSELEFHLYSQLHYSSNAGVLEEQEDRGGEEA
EGQNSQQLEVPEKTVDVDGEQEQTGGSRTSSPNLSELLQHLKYKKKGEKPDKQRQGKGDH
KGQRSLSSSLFEEVIVIDSSPDVISISDDDTTDEDKGVCALKGRGLNQRQTSTPAQQGTE
KRSVRVPVTVDSSSSESDSDQSESKSDMSDSSDSDGLENWMILGRGNQDGDQSISLNLKG
GSDNNTDVEEEVGSWLVSAKDKEARIYNKDKGARTTVSNRYYTNKNVQCRNCNKNGHLSK
NCPEPKKLPPCFLCGNPGHLISGCPNKHCNNCGLPGHLYNSCSERAYWRKQCERCCMTGH
FAEACPEIWRQYHNTTKEGPPVKQQRKEHQSRHHSFCYNCSRKGHYGHACKLQRMFNGTY
PSTPLINHYDTAKDIKCRQDWMKSKAKELKKNGFLPACSQTRHTPGPPKKKQKLSNHKSN
PQPYHTPHQSSSKTTPKSSHIFFNDDDGIGAAAPKTSKNNKHKQQKGPSNVKPWKPKRPV
PTSKEPLPPTKLILDEADDFPRGGGKGKDVVKKRNRLKKTKQVPLAQPEGHKKSRPDRLC
WTVTGEMQGSASKQEKGKRKKRNRARRSADKKDSAQLYPTDENLFIIKQKKKRNRYESF
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atgtactgtacgtaccaggatcggaaggagttggaggatgatctctatcaagaggatgaa
agggactctgaggggtcagaggttaacagcgagctggagttccacctctacagccagctc
cactactcttctaatgctggtgtgttagaggagcaggaggatagaggaggagaagaggca
gagggccagaacagccagcagcttgaggtgcctgagaagactgtagatgttgacggggaa
caggaacagactggaggaagtaggacttcgtcacctaatttgagcgagttactgcagcac
ctgaagtacaaaaagaagggagagaaaccagataaacagaggcagggaaaaggtgaccat
aaaggtcagaggtctttgtcgtcatcactttttgaggaggtcattgtgattgactccagc
cctgatgtcatctccatctctgatgatgacactaccgatgaggataaaggagtctgcgca
ttaaagggtcgaggcttaaaccagcggcagacttctaccccagcccaacagggaactgag
aaaaggagtgtccgtgtgccagtgactgtggactccagcagctccgagtctgattcagat
cagtcggagtcaaagtctgatatgtcagattcttccgattctgatggtctggagaactgg
atgatcctgggtcgaggaaaccaagatggagaccagtccatctcactcaacctgaaggga
gggtctgacaacaacacagatgttgaagaagaagtaggcagctggttggtttctgccaag
gacaaggaggctcggatctataacaaagacaagggtgccaggacaacggtgtctaacaga
tactatactaacaagaacgtccagtgtagaaactgcaacaagaacggacatctctccaag
aactgccctgagcccaaaaagttgccgccctgcttcctttgtggcaacccaggccacctg
atcagtggatgtcccaataagcactgcaacaactgcggcttgcctgggcacctctacaat
tcttgcagcgagcgagcatactggcgcaaacagtgcgaacgctgctgcatgaccgggcac
ttcgctgaagcttgtccagagatctggagacagtatcacaacacgactaaggaaggtcct
cctgtaaagcagcaacgaaaagaacaccagagtcgacaccattccttctgctacaactgc
tccaggaaaggacactatggccatgcgtgtaaactgcagaggatgttcaatgggacgtat
cccagcacccctttaattaaccactatgacactgcaaaggacatcaaatgcagacaagac
tggatgaagtcgaaggctaaagaactgaagaaaaatggctttttacctgcctgttcgcag
acccgtcacactccaggacctccaaagaagaaacagaaactcagcaatcacaaaagtaac
ccccagccttaccatacacctcaccaaagctcaagcaagactacccccaaatccagccat
atcttttttaatgacgacgatggcattggggctgctgcacccaaaacgagtaagaacaat
aagcacaaacaacagaaaggccctagcaatgtgaaaccgtggaaacccaagagaccggtg
cccacctcgaaagagcctctcccaccaactaaactcattttggatgaagcagatgacttt
cccagaggtgggggtaaaggaaaggatgtagtgaagaagaggaataggttgaagaaaaca
aagcaagttcctttagcacaaccagaaggacacaaaaaaagcagaccagaccgtctctgt
tggactgttactggagagatgcaagggtcagcgtcgaagcaagagaaaggaaagaggaaa
aagagaaatcgagcccggaggagcgctgacaaaaaggattctgcacagttgtacccaaca
gatgagaacctgtttatcatcaaacagaagaagaaacgcaacagatatgagtctttttga
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