KEGG   Etheostoma cragini (Arkansas darter): 117935914
Entry
117935914         CDS       T07493                                 
Name
(RefSeq) histone-binding protein RBBP4 isoform X1
  KO
K10752  histone-binding protein RBBP4
Organism
ecra  Etheostoma cragini (Arkansas darter)
Pathway
ecra03082  ATP-dependent chromatin remodeling
ecra03083  Polycomb repressive complex
ecra04218  Cellular senescence
Brite
KEGG Orthology (KO) [BR:ecra00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    117935914
   03083 Polycomb repressive complex
    117935914
 09140 Cellular Processes
  09143 Cell growth and death
   04218 Cellular senescence
    117935914
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ecra03036]
    117935914
Chromosome and associated proteins [BR:ecra03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     117935914
  Histone modification proteins
   HAT complexes
    HATB complex
     117935914
   HDAC complexes
    Sin3A-HDAC complex
     117935914
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     117935914
    PRC2.2
     117935914
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     117935914
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    117935914
  Chromatin remodeling factors
   NuRD complex
    117935914
   NuRF complex
    117935914
   NuRF complex (fruit fly)
    117935914
SSDB
Motif
Pfam: WD40 CAF1C_H4-bd WD40_CDC20-Fz WD40_Prp19 Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd Beta-prop_EIPR1 Beta-prop_TEP1_2nd WDR55 Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_WDR75_1st Beta-prop_EML EIF3I WD40_MABP1-WDR62_2nd WD_LRWD1 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR19_1st WD40_RFWD3 Beta-prop_DCAF12 ANAPC4_WD40 Beta-prop_RIG_1st WD40_MABP1-WDR62_1st eIF2A Beta-prop_IFT140_1st MIOS_WD40 Beta-prop_SPT8 NBCH_WD40 Beta-prop_IFT122_1st Beta-prop_DCAF4
Other DBs
NCBI-GeneID: 117935914
NCBI-ProteinID: XP_034714421
LinkDB
Position
20:16600122..16604934
AA seq 426 aa
MADKDAAFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKD
YSVHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGAEFGGFGSVSGKIEIEI
KINHEGEVNRARYMPQNPCIIATKTPTSDVLVFDYTKHPSKPEDPSGECTPDLRLRGHQK
EGYGLSWNPNLSGCLLSASDDHTICLWDISTVPKEGKIVDAKTIFTGHTAVVEDVSWHLL
HESLFGSVADDQKLMIWDTRSNNTSKPSHAVDAHTAEVNCLSFNPYSEFILATGSADKTV
ALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPED
AEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPEGAA
DSEVQA
NT seq 1281 nt   +upstreamnt  +downstreamnt
atggcggataaagacgctgcatttgatgatgctgtggaggaaagggtgatcaatgaggag
tacaagatctggaagaagaacactcctttcctctacgacctggtcatgactcacgccctg
gagtggcccagcctcactgcccagtggctgccagatgtcaccaggccagagggcaaagac
tacagtgtgcacagactggttttgggaacacacacttctgatgagcagaatcaccttgta
attgctagtgttcagctccctaatgatgatgcccagtttgatgcatcacactacgacagc
gaaaaaggagcagagtttggaggctttggctctgtaagtgggaagattgagattgagatc
aagatcaatcatgagggggaagtgaacagagcccgctacatgcctcagaatccttgcatt
attgccacaaagacccccaccagtgacgtgctggtgtttgattacacaaagcacccctcc
aaacctgaagacccttctggagaatgcaccccagatctgcggttgagaggccaccagaag
gagggctatggcctctcctggaacccaaacctcagcggctgcctcctcagtgcttctgat
gaccatacaatctgcctatgggacatcagcacagtgcccaaagagggaaagatagtggat
gccaagaccatcttcacaggccacacggctgtggtagaggatgtttcctggcacctgctt
cacgagtcgctctttgggtctgtggccgatgaccaaaaacttatgatctgggacacacga
tccaacaacacctccaagcccagccatgcagtggacgcccacacagctgaggtcaactgc
ttgtccttcaacccctacagcgagttcatcctggccactggctctgcagataagaccgtg
gctctttgggacctaaggaacttgaagctaaagctgcactcttttgagtctcacaaagat
gagattttccaggttcagtggtctcctcataatgaaacaattctggcctccagcggcacc
gacaggaggctcaatgtctgggacctcagtaagatcggagaggaacagtcaccggaggat
gctgaggatggccctcctgagctactgttcatccacggaggacacacagcaaagatctcc
gacttctcttggaaccccaacgagccgtgggtcatctgctctgtatcagaggacaacatc
atgcaagtctggcagatggctgaaaatatctacaatgacgaggacccagaaggtgctgca
gattcagaggtgcaggcatga

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