Etheostoma cragini (Arkansas darter): 117935976
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Entry
117935976 CDS
T07493
Symbol
smc6
Name
(RefSeq) structural maintenance of chromosomes protein 6 isoform X1
KO
K22804
structural maintenance of chromosomes protein 6
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ecra03400
]
117935976 (smc6)
DNA repair and recombination proteins [BR:
ecra03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
117935976 (smc6)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
AAA_15
AAA_29
TMF_TATA_bd
AAA_21
ABC_tran
Motif
Other DBs
NCBI-GeneID:
117935976
NCBI-ProteinID:
XP_034714554
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All DBs
Position
20:6388688..6407007
Genome browser
AA seq
1087 aa
AA seq
DB search
MSKRKVKVTSGATAFKSRRVTAVGMEDAPDDKKHQRPSSSSLTPSAAGDIGVIETITLKN
FMCHHLLGPFQFGSNVNFIVGNNGSGKSAILTALIVGLGGKATVTNRGASLKDFVKTNEN
AADITIKLKNRGPDAYKRDIYGDSISIEHRIFSDGSRNCRLKSKSGQLISTKKEELTGIL
DHFNIQLDNPVSILNQEMSKQFLHSKSESDKYKFFMKATLLEQMKRDYVHIKLNKTVTRQ
QVERQEESLKVLKQEFLQKKERYEKLPSFSEIKGVLENLKKAMAWCLVKEKEQLVQQLKE
DVENEANNYKHQDNLQLCQTMVIQVEKKLQCINSRVTSMKKEQESLSEDHLNLKEQVKAV
SKAHKEQELVYFRAVNKLKQSEQEQNLLEEKIRKAKTSASLNNEEEMEYSAQQKKISSRK
EQLAELEKKCSQLNEEIKNKHQALYKGKEERDKLRLEERNIQVLYESKLRRKNQVLASRS
NKLKRFGDHVPDLLGSITEAYTTGRFHKRPVGPIGACISLKDPMLAVAVECCLRSFMKAF
CCDNYKDEAVLQELMSKYYPKGNRPQIIVSPFSEKLYNIHGRKAHNQEYPSVLDIITASS
PVIVNCLIDMRGIESILIIKEKEKARRVMQQGRPPKNCREAFTMEGDQVYPNRYYTSDIS
MAKYLGGDLESEISMLESDLENHQAQLSRFQLHVTSVTEDIVRMESELNSTIMTLKKTLV
SVNQVKATITELENAGEEHIDDVSSLEEVAQENRQKIEAEKQNVHEAKTELDNHQKTAED
IESKYASVRDRLDQLSEDTEPIMDEQLKLEAERAKHKQTLNILENKLKAHEDNIQAMRSD
LAQREKELQEYVAKATEISPERQQVTRSPKSIDTEITWLQKKLKVDESNHGEHEQVVREY
AEALALYKEKTNQVRDLRRFIDRLDTIMSDRQSRYKTMRRSLSVRCKLYFNNFLIKMNCC
GSMIFDHNNETLSISVTPPGREDNGASDMRSLSGGERSFSTVCFMLSLWEITESPFRCLD
EFDVYMDMHNRRISLDLLLELSERQHLRQFIFVTPLTTSHLPKTKLIKIHQLQDPEGDRS
ERVDDSV
NT seq
3264 nt
NT seq
+upstream
nt +downstream
nt
atgagtaagaggaaagtgaaagtgaccagtggtgcgacagcgttcaagagccgcagagtg
actgctgtgggtatggaagatgcaccggatgataagaagcatcagagaccttcctccagc
agcctcactccctctgccgcaggagatatcggtgtcattgagaccatcactctcaagaat
ttcatgtgtcaccatttgctcggtccattccaatttgggtccaatgtgaattttatcgtc
ggcaacaatggaagtggaaaaagtgcaatccttactgctttgattgtaggcctcggtgga
aaggccactgtcacaaacagaggagcgtctctgaaggattttgtgaagaccaatgagaat
gctgcagatataacaataaagctaaaaaacagaggaccagatgcttataaaagggacatc
tacggcgactctatctccattgagcaccggatctttagtgatggatctcgaaactgcagg
ctgaagagcaaatcaggacaacttatctcaaccaagaaggaggagctgaccggcattttg
gaccactttaacatccagttggataacccggtgtccattctcaaccaagaaatgagtaaa
cagttcctgcattcaaaaagtgaatcagacaagtataagttctttatgaaagcaactctg
ctggagcagatgaagagagattacgtccacatcaagctcaataaaacagtaacacgacaa
caggttgagagacaagaagagtctctcaaggtcctgaagcaagagtttctgcagaagaaa
gagaggtatgaaaagttgccgtccttcagcgagataaagggggttttggagaatctgaag
aaagcaatggcctggtgtttggtcaaggagaaggagcagttggtgcagcagttaaaggag
gacgttgaaaacgaagccaataattacaaacatcaggacaaccttcagctttgtcagact
atggtcatacaagtagaaaagaaacttcagtgcatcaatagcagagttactagcatgaaa
aaggaacaagagtctctatccgaggaccatctgaatttgaaagagcaagtaaaggcagtc
agcaaagctcacaaggaacaagagctcgtttattttcgggctgtcaacaaactcaaacag
tcagagcaagagcaaaatcttcttgaggagaaaattagaaaggcaaaaacaagtgcaagc
ctgaacaacgaggaagagatggaatatagcgcacagcagaagaaaatatccagtcggaaa
gagcagcttgcagagcttgagaaaaagtgctcacagctgaatgaagagataaaaaacaaa
catcaggcactttacaaaggaaaggaggaacgggacaagctgagattggaggaaagaaac
atccaggttttgtatgagtccaaactgaggaggaagaatcaggtcctcgccagtcgatca
aacaaactaaagcggtttggagatcatgtacccgacctgctgggttcaattactgaggcg
tacaccacaggacgctttcacaagagacccgttggtcccataggggcgtgcatcagtttg
aaggatcccatgttggctgtagccgtggagtgctgtctgcggagcttcatgaaggcattc
tgctgtgacaactacaaagacgaggcggtcctgcaggagctcatgtctaaatattaccca
aagggcaacaggccacagatcatcgttagccctttctctgaaaaactttacaacattcat
ggacggaaagcacataatcaagaatacccgtctgtgctggacataatcacagcgtcaagc
cccgtcatcgtcaattgcctgattgatatgagggggattgaatccattctcataatcaaa
gaaaaagaaaaagcgaggagagtcatgcagcaaggccggcctcctaagaactgtcgtgaa
gccttcaccatggagggagatcaggtgtacccaaaccgttattacacctccgacatcagc
atggccaaatatcttggtggggatctcgagtctgaaataagcatgctggagtccgacttg
gagaatcaccaggctcagctgtccaggtttcaactccacgtcacctctgtgacagaggac
atcgtgagaatggagagcgagcttaacagcaccatcatgaccctgaagaagactctggtc
tctgtgaatcaagtcaaggcgacaataacagagctggagaatgctggcgaggagcacatc
gatgacgtcagctccttggaagaagttgcccaagagaaccgacagaagattgaggcagaa
aagcagaacgttcatgaggcaaagacggagctcgataatcatcagaaaacagcagaggac
attgagtccaagtacgcttctgttagagatcggcttgatcagctttctgaagacacggag
ccgataatggatgagcagctgaagctggaggccgagcgtgcaaaacacaaacaaaccctt
aacattttagaaaacaagctgaaggctcatgaagacaacatccaagctatgagaagtgac
ctcgcccaaagagaaaaagagttacaggaatatgtggccaaagccacggagatcagtcct
gaacggcagcaggtgacccgcagccccaagagcatcgacaccgagatcacttggctgcag
aagaaactcaaagtggacgagagcaaccacggcgagcacgagcaggttgtcagggagtat
gctgaggccctcgctctctacaaagagaaaaccaaccaagtgagagatctgcggaggttc
atcgatcgactcgacaccatcatgtcagacaggcagagtagatataaaacaatgcgtagg
tccctctcggtcagatgcaagttgtacttcaataactttctgataaagatgaactgctgt
ggctctatgatttttgatcacaataatgagacactctcaatctcggtaacgcctccaggc
agggaggataatggtgcgagtgacatgaggtctctgtctggtggtgaacgctccttctcc
actgtttgcttcatgctctccctgtgggagatcaccgaatcacccttcagatgcctcgat
gagtttgacgtttacatggatatgcacaatcgcagaatctctctggatctcctcctggag
ttgtcagagcggcagcaccttcgacagtttattttcgttactcccctcaccaccagccat
ttgcccaaaaccaagctcatcaaaatccaccagcttcaggatccagaaggagatcgtagt
gaaagggtggatgacagtgtttga
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