Etheostoma cragini (Arkansas darter): 117936034
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Entry
117936034 CDS
T07493
Symbol
rtn1a
Name
(RefSeq) reticulon-1a isoform X1
KO
K20721
reticulon-1
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ecra04131
]
117936034 (rtn1a)
03036 Chromosome and associated proteins [BR:
ecra03036
]
117936034 (rtn1a)
Membrane trafficking [BR:
ecra04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
117936034 (rtn1a)
Chromosome and associated proteins [BR:
ecra03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
117936034 (rtn1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Reticulon
RHD_RETREG1-3
DUF4736
Motif
Other DBs
NCBI-GeneID:
117936034
NCBI-ProteinID:
XP_034714676
LinkDB
All DBs
Position
20:13927001..13945762
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AA seq
726 aa
AA seq
DB search
MSTQPGEELGSEGRWFGDDYERNGLFGNTPSRFEELREEFKPRGGEVACDLDQQFHPFQD
DGKRPPVAMETASTDEPTSGLFRKPMNDDGDVYTSLMSNQSFTSGQEASYLSDDLKLSKP
YSGSSALDHFSNDTYSFSSNTKMTSNLEDDMPKSLFGSDKAESYNYMDINYGDERSDQHS
LVDTGSTGHDSLVSYMDKNHGRNGDEEEEEENLGPALGSHSFPYVEEPSDEELSDYRSYR
NLGGAPQMASPVKITLTESQPPTAKTEPLQHPPPVNASERENVLSVGLQGVPTVTLSEPE
DDSPASTPNASPTQKEFPSQDMYPVKPAVSKSSASTKTGSREQEGSSAESGDSEIELVSE
EPSKATSNPFSQPPKSKSTSSQPNNPFDNPPAKGGFGLVGNHAPPTAYSILREEREAELD
SDLFIESASEESPKREQGFSGPKQGVSPPSPLAPSASPPRSTAEAMPNEPLITEKVKTPV
KTDEDRPSKPKPPTAAVPPEVRSERPHQDDMHKHTNEGRGDLGKPATSTILQGFDKQKAI
DLLYWRNVKQSGAVFSSVLLLLFSLTQFSVVSVGAYLALAALSATISFRIYKSVLQAVQK
TDEGHPFKAYLEIEIALSQDQISKYADKILLYTNTCMKELRRLFLVQDLIDSLKFAVLMW
LLTYVGALFNGLTLLILAVVSMFTMPVVYEKHQAQIDQYVGLIRTQVNSVVGKIQAKIPG
AKRKEE
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atgtctactcagcccggtgaggagctaggctcggaggggaggtggtttggggatgactat
gagagaaacggcctgtttggtaacacaccaagccggttcgaagagctccgtgaagaattt
aagccgagaggcggcgaggtggcgtgcgacctggatcaacaatttcatcctttccaggac
gatgggaaaaggcctcccgttgctatggaaactgcatctacagatgaacccacgtccggc
ctgtttaggaagcctatgaatgatgatggtgatgtctacacttccctgatgtcaaatcag
agcttcacatcgggtcaagaagcctcctacctgtcggacgacctgaaattgtccaagccc
tactctggctcttctgccctggatcacttctccaacgacacctatagcttcagctccaac
accaagatgacttccaacctggaggatgacatgccaaaatctctgtttggctcagataag
gccgaatcctacaactacatggacatcaactacggggatgagcgcagtgaccagcacagc
ctggtggacacaggctcaactggtcatgactcattggtcagctacatggataaaaaccat
ggaagaaatggggatgaggaggaggaggaggaaaacctaggtccagcactgggctcccac
tccttcccatacgttgaggagccatctgatgaagagctgtcagactaccgctcctaccga
aacctgggtggcgccccacagatggccagcccagtgaagatcaccttgaccgagtcccag
cctccaactgccaaaactgagccactgcaacatccccctccagtcaatgcttctgagcgt
gaaaacgtcctcagtgtgggcttacagggggttcccactgtgacgctatcagagccagag
gacgacagccctgcttccactcccaatgcttcaccaacacaaaaagaattcccttcccag
gatatgtacccagtgaagcctgcagtttccaaaagcagtgcaagcacaaagacaggcagc
agggagcaagagggcagcagcgcagagtctggagactcagagattgagctggtgtctgag
gagccctcaaaggccactagcaaccccttttcccagccacctaaaagcaagagcacttcc
agccagcctaacaacccctttgacaatcccccagccaagggtggtttcggcctagtaggc
aaccatgctccacccacagcctacagcattctgagggaggagagagaggcagagcttgac
agtgatctcttcattgagtctgcatctgaagagagcccaaagagagagcagggcttcagt
ggccccaaacagggagttagccctccttctcccctggctcccagtgcctcccctccccgc
agtacagctgaggcaatgccaaatgaacccctgatcacagaaaaggtgaagaccccagtg
aaaacagacgaggatcgccccagcaagcccaaaccacccaccgctgccgtgcccccagag
gtgcgatcagaaaggccccaccaggacgacatgcacaagcacaccaatgagggcagagga
gatctgggaaaacctgccacctcaaccatcctgcagggctttgataagcaaaaagcgatt
gacctgctctactggaggaatgtaaaacagtcgggggccgtgttcagcagcgtgcttctg
ctcctcttctccctgacccagttcagcgtggtcagcgtcggcgcctacttagccttggca
gccctctctgctaccatcagtttcaggatctacaagtctgtgctgcaggctgtgcagaag
accgatgagggacatcctttcaaagcctacctggagatcgaaatcgctctttcccaggac
cagattagtaaatacgccgacaaaatcttgctgtacaccaacacctgtatgaaggagctc
cgcaggctgtttctcgtacaagacctgatcgactccctgaagtttgctgttttgatgtgg
ctgctgacctatgtgggcgctctcttcaacggcctgacactgcttatcctagctgtggtt
tccatgttcaccatgcctgtggtctatgagaaacatcaggcacagattgatcagtatgtg
ggactaatacggacccaggtcaactctgtggtggggaagatccaagcaaagatccctggg
gccaagaggaaggaggagtag
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