Etheostoma cragini (Arkansas darter): 117936309
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Entry
117936309 CDS
T07493
Symbol
capn3a
Name
(RefSeq) calpain-3 isoform X1
KO
K08573
calpain-3 [EC:
3.4.22.54
]
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
117936309 (capn3a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ecra01002
]
117936309 (capn3a)
Enzymes [BR:
ecra01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.54 calpain-3
117936309 (capn3a)
Peptidases and inhibitors [BR:
ecra01002
]
Cysteine peptidases
Family C2: calpain family
117936309 (capn3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_6
EF-hand_1
EF-hand_7
CAPN13-like_C_EFh
EF-hand_8
EF-hand_5
Motif
Other DBs
NCBI-GeneID:
117936309
NCBI-ProteinID:
XP_034715074
LinkDB
All DBs
Position
20:281104..300146
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AA seq
716 aa
AA seq
DB search
MPYTPSGFFCDRLIRERERRDGEGSLNKPQRFNGQDYKTLRQECLQRKGLFEDESFPATV
ESLGFKELGHKSNKVKNIVWKRPKEICENPQFIVGGASRTDICQGDLGDCWLLAAIACLT
LNEKLLYRVVPHEQSYTEDYAGIFHFQFWRYGDWVDVVIDDRIPTFNNQLVFTKSAERNE
FWSALLEKAYAKLHGSYEALKGGNTTEAMEDFTGGVTEFYEMKEAPKELYKIMKKALERG
SLMGCSIDSLVPARFETRTVTGLVKGHAYSVTAVEECKPSQHKDTKVRLVRLRNPWGQVE
WNGPWSDNSKEWATLSKTEKEKLQHQSAEDGEFWMSFEDFKKNYTKIEICNLTPNALEDD
KIHKWTVSVNEGRWVRGCSAGGCRNYPDTFWTNPQYRLRLMEEDDDPEDNDVGCTFVVAL
MQKNRRKERKLGANLYTIGFAIYEVPKEMHGNKQHMPKEFFLLTSSKARCKSYINLREVT
QRFRLSPGEYVIIPSTYEPHQEGEFILRVFSEKRNTSEEIENRIEADHPVPAPASAGEES
EEDQQFRTIFQEIAGDDMEISANELKNVLNRVVTKHKDLNTEDFSLESCRSMIALMDVSF
MDGTGRLNLREFRHLWNKIKQWQGIFKHYNADQSGSINSYEMRNAVNDAGFRLNNQLYHI
ITMRYANENMNIDFDSFISCLVRLEAMFRAFQAFDQDGDGSIRLSVLEWLQLTMYA
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgccttatacaccgtctggctttttctgtgaccggttgatccgggagcgagagaggaga
gatggggaaggatctttgaacaagccccagcgctttaacggccaggactacaaaacccta
agacaggaatgtcttcagaggaagggcctgtttgaggatgagtctttcccggccactgtg
gagtctttgggcttcaaggagctcggacacaagtccaacaaggtcaagaacatcgtctgg
aagaggcccaaggaaatctgtgagaacccccagttcattgttggaggagccagtaggaca
gacatctgccagggagaccttggtgactgctggttgctggccgccatcgcctgcctcacc
ttgaatgagaagcttctctaccgcgttgttccccacgagcaaagctacacggaggactat
gctggcatcttccacttccagttctggcgttatggcgactgggtcgacgtcgtcattgac
gaccgcatcccaaccttcaacaaccagctggtcttcaccaagtccgctgagaggaacgag
ttctggagcgccctgctggagaaggcctacgccaagctgcacggctcctacgaggccctg
aaggggggaaacaccaccgaggccatggaggatttcactgggggggtcactgagttctac
gagatgaaggaagctcccaaagagctctacaagatcatgaagaaagctctggagagaggc
tccctcatgggctgctccatcgattcgctggttcctgctcgctttgagactcgcaccgtg
acgggacttgtgaagggccacgcctactctgtgacggccgtggaggagtgtaaaccatcc
cagcacaaggacactaaagttcgtctggtgcgtctcaggaacccgtggggtcaagtggag
tggaacggtccctggagtgacaactctaaggagtgggccacgctctctaagactgaaaaa
gagaagctgcagcaccagagcgccgaggacggagagttctggatgtcatttgaggacttc
aaaaagaactacactaagatcgagatctgtaacctcacccccaacgccctggaggacgat
aagatccacaagtggacggtttctgtgaacgagggtcgctgggtgagaggctgctccgct
gggggctgcaggaactacccagacactttctggaccaaccctcagtaccgcctccgtctg
atggaggaggacgatgaccccgaggacaacgacgtgggctgcaccttcgtggtggctctg
atgcagaagaaccggcggaaagagcgcaagctgggagccaacctgtacaccatcggattc
gccatctacgaggtgccgaaggagatgcacgggaacaagcagcacatgccgaaggaattc
ttcctgttgacctcctccaaagctcgctgcaagtcctacatcaacctgcgcgaggtgacc
cagcgcttccgcctgagccccggggagtacgtcatcatcccctccacgtacgagccgcac
caggagggcgagttcatcctgcgagtcttctctgaaaagaggaacacctcagaggagata
gagaacaggatcgaggccgatcatccagtgccagcgccggcctccgcgggggaggagagc
gaggaggaccagcagttcaggactatttttcaggagatagccggtgacgacatggaaatc
tcagccaacgaactgaaaaacgttctcaacagagtggtcaccaaacataaggacctgaac
acagaggacttcagcctggagagctgcaggagcatgattgctctgatggacgtatccttt
atggatgggacaggtagactcaatctgcgggagttcagacatctgtggaataagatcaag
cagtggcagggaatctttaagcactacaacgccgaccagtccggcagcatcaacagttac
gagatgaggaacgctgtcaatgatgcaggcttccgtctcaacaaccagctgtaccacatc
atcaccatgcgctacgccaacgagaacatgaacatcgacttcgacagcttcatcagctgt
ctggttcggctcgaagccatgttcagggcgttccaggccttcgaccaggatggagatggg
tcgatccgactcagtgtcctggagtggctccagttgaccatgtacgcctaa
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