Etheostoma cragini (Arkansas darter): 117936392
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Entry
117936392 CDS
T07493
Symbol
tnfaip2b
Name
(RefSeq) tumor necrosis factor alpha-induced protein 2 isoform X1
KO
K19989
tumor necrosis factor alpha-induced protein 2
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ecra04131
]
117936392 (tnfaip2b)
Membrane trafficking [BR:
ecra04131
]
Exocytosis
Tethering complex
Exocyst complex assembly proteins
117936392 (tnfaip2b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec6
CSF-1
Vip3A_N
PXA
SR_plectin_7
Motif
Other DBs
NCBI-GeneID:
117936392
NCBI-ProteinID:
XP_034715251
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All DBs
Position
20:2063265..2076274
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AA seq
666 aa
AA seq
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MGRMCLKLRCCFPRRFCKAEDLPERPGSRTSPNSNTMPAETVTDGHRLISLPDGRWFPFG
RGVRAQVVAQNPSMTDGQSSPGHKTPQIAPLTFEQRLEAQLFYEAGALLIEREERLFGEI
NEAETLKHHEEEVNKLAEDHQALKGLVLQNLSLSLREVNLEALTSAVKAVNQEEDQDQRW
TQRSRTPPDWRPGEWRKLHDSTLRSQVEERLENPATPLADQGNMSAIQANICSMGRQLKE
DLLSVVDGVKGCYPPEWNISHFYASLYHQAFSTRLRTIADFGLGDKDCTVLLRWVNEFYP
QLLQKPELASEIDVEALGKLLPDDLLKNLEEQYLTKQQDDLTTYIKRILEDERQKWNRGE
EPTRRDGCFVSTGAYDIIQVINGTVTSAEIVVGDLHKAQSITCQLTDLMQRYNSFQKDVI
RQNKANSRPIIKAHLDGVEQFRDVLNKKKQLFTEDVRESLLHVLTDMTQSAHSYLLKPVH
DVLKPQYRMLGTNKWLEKAVFEKLLDSIENEIQDLRGSREACHQKLIGQLHQEVAQEYVK
RLLKRNVKLKDKEQQLKAYGVVKNNAESLHHLFAQMGSAVDWCTEILTTIAEVLKFQDVP
TIQMQIASLGRAYPDLSEKHVSALLKLKTNLTRADRKMVKETLLDTLGETERPDYSRPFF
SGVQVK
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atgggaaggatgtgtttgaagcttcgctgctgtttcccccgcagattctgcaaagcagaa
gatttaccagagcgtccaggcagtcggaccagtcccaactctaacaccatgccggccgag
acagtcacagacggacacaggctcatctctctcccggatggaagatggtttcccttcggg
aggggcgtcagagctcaggtcgttgcccaaaacccttccatgactgatggacagagctca
cccggtcataagacgccccaaatcgcgcccctcacttttgagcagagacttgaggcccaa
ctcttttatgaggccggtgcgctgctgatagagagagaggagcgtctgtttggggagata
aacgaggcagagacgcttaaacatcacgaggaagaagtaaacaagcttgctgaagaccac
caggccctaaaaggacttgtactacagaatctatctctcagcctgcgggaggtcaatttg
gaggctctgacgtctgcggtgaaggccgtgaaccaggaggaggaccaggaccaacggtgg
actcagaggtctcggacccctccagactggaggcccggtgaatggcggaaactccacgac
tccacgcttcgcagccaggtggaggagcgcttagaaaaccctgcgacgccccttgctgac
caggggaacatgtctgctatccaggcgaacatctgcagcatgggccggcaactgaaggaa
gaccttctgtctgtggtggacggggtcaagggttgctacccccccgagtggaacatcagt
catttttacgccagcttgtaccaccaagccttcagcaccagactcaggacgatcgcagac
tttggtctgggggacaaggactgcactgtcctcctgcgctgggtcaacgagttttaccca
caactccttcaaaagccggagctggccagtgaaattgatgtcgaagcgctgggaaaactg
ctgcctgacgacttgttgaaaaacctggaggagcaatacctgaccaaacagcaggatgat
ctgacgacgtacatcaagcgcatccttgaggacgagcggcagaagtggaacaggggagag
gagccgacgagacgggacggctgcttcgtcagcaccggggcctacgacatcatccaggtt
ataaatggaacggtgacatcggcggaaatagttgtgggagatctgcacaaggcccagagc
ataacgtgccaactgacagatttaatgcagaggtacaacagcttccaaaaagacgtcata
aggcaaaacaaagcaaacagccggccgattatcaaggcgcacctcgacggtgttgagcag
ttcagggacgtcctcaataagaaaaaacagctgttcacagaggatgtgcgggaaagtttg
ctgcatgttctgactgacatgacacaatctgcccactcatatttattaaaacctgtgcac
gatgtcctcaagccacagtaccgcatgctgggaaccaacaaatggctggagaaggccgtg
tttgagaagctgctggacagcattgaaaacgagattcaggatcttcgtggttcccgtgaa
gcctgtcaccagaaactgattggccagctgcaccaggaagtcgcccaagaatatgtgaag
cggctcctgaaacgaaacgtcaaactgaaggacaaggagcagcagctgaaggcctacggg
gtcgtgaagaacaacgcggagagtttgcaccatttgttcgcccaaatgggatcagcggtg
gattggtgtacggaaatcctgactacgattgcagaagtgctgaaattccaagacgtcccc
accatacagatgcaaattgcatcactgggaagggcttatcctgacctcagtgagaaacat
gtgtcggctctgctcaagctcaagaccaacctcaccagagccgacaggaaaatggtcaaa
gagactttgttggacactctgggggagacggaaagacccgactattctcgtccctttttc
tccggagttcaggtcaaatga
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