Etheostoma cragini (Arkansas darter): 117936438
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Entry
117936438 CDS
T07493
Name
(RefSeq) E3 ubiquitin-protein ligase SMURF2-like
KO
K04678
E3 ubiquitin ligase SMURF1/2 [EC:
2.3.2.26
]
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04120
Ubiquitin mediated proteolysis
ecra04137
Mitophagy - animal
ecra04144
Endocytosis
ecra04340
Hedgehog signaling pathway
ecra04350
TGF-beta signaling pathway
ecra04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
117936438
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
117936438
04350 TGF-beta signaling pathway
117936438
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117936438
04137 Mitophagy - animal
117936438
09144 Cellular community - eukaryotes
04520 Adherens junction
117936438
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ecra04131
]
117936438
04121 Ubiquitin system [BR:
ecra04121
]
117936438
03029 Mitochondrial biogenesis [BR:
ecra03029
]
117936438
Enzymes [BR:
ecra01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
117936438
Membrane trafficking [BR:
ecra04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
117936438
Autophagy
Mitophagy
Other mitophagy associated proteins
117936438
Ubiquitin system [BR:
ecra04121
]
Ubiquitin ligases (E3)
HECT type E3
117936438
Mitochondrial biogenesis [BR:
ecra03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
117936438
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
Motif
Other DBs
NCBI-GeneID:
117936438
NCBI-ProteinID:
XP_034715341
LinkDB
All DBs
Position
2:complement(19978042..20037399)
Genome browser
AA seq
775 aa
AA seq
DB search
MSSQGVRRNGPVKLRLTVLCAKNLAKKDFFRLPDPFAKVVVDGSGQCHSTDTVKNTLDPK
WNQHYDLYIGKADSITISVWNHKKIHKKQGAGFLGCVRLLSNAINRLKDTGYQRLDLNKL
GPNDNDTVRGQIVVSLQSRDRIGTGGPVVDCSRLFDNDLPDGWEERRTASGRIQYLNHIT
RTTQWERPTRPASEYSSPSGRPLSCVVDENTPVMTPVNGAEASCPQGEPRIQERRVRSQR
HRNYMSRTHLHTPPDLPEGYEQRTTQQGQVYFLHTQTGVSTWHDPRVPRDLSNVNCEELG
PLPPGWEIRNTATGRVYFVDHNNRTTQFTDPRLSANLHLVLNPSPNGSRVAMDSQNTNLS
HPTQLKDQGGPGVPQQAMSPAQLPEEAECLTVPKYKRDLVQKLKILRQELSQQQPQAGHC
RIEVCREEIFEESYRQVMKMRPKDLWKRLMIKFRGEEGLDYGGVAREWLYLLSHEMLNPY
YGLFQYSRDDIYTLQINPDSAVNPEHLSYFHFVGRIMGMAVFHGHYIDGGFTLPFYKQLL
GKSITLDDMESVDPDLHNSLVWILDNDTTGVLDHTFCVEHNAYGEIIQHELKPNGKSVPV
TEDTKKEYVRLYVNWRFLHGIEAQFLALQKGFNEVIPQHLLKSFDEKELELIVCGLGKID
ISDWKSNTRLKHCTPESNIVKWFWKAVESFDEERRARLLQFVTGSSRVPLQGFKALQGAA
GPRLFTIHQIEANTNNLPKAHTCFNRIDIPPYESYDKLYDKLLTAIEETCGFAVE
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atgtctagccaaggagttaggagaaatggcccggtaaagctgcggttgacagtcctgtgt
gccaagaatctggcaaagaaagacttcttccggttgccagatccctttgccaaagtggtg
gtggacggctcaggacaatgccactctacagatactgtgaaaaatacgctggaccctaag
tggaatcaacattatgacctatacattggaaaggcagactcaatcaccatcagtgtatgg
aaccacaagaagatccacaaaaagcagggtgcaggtttcctgggctgtgtccgccttctg
tccaacgccatcaacagactcaaagacactggctatcagagactggacctgaataagctg
ggtcccaatgataatgatactgtgagaggacaaatagttgtaagtcttcaatccagagat
cgcattgggacaggagggccagtggtggactgcagtcgcctgttcgacaatgacttacct
gatggctgggaagagaggaggacagcctctggaaggatacagtacctgaaccacatcaca
cgtaccacgcagtgggagagacctaccaggccagcatctgagtactccagcccatcaggg
cggccgctgagctgtgtggtggacgagaacacgccagtgatgacacctgttaatggggcc
gaggccagctgcccacagggcgaaccacggatccaggagagaagggttcgatcgcagcgg
catcgtaactacatgagtcgaacacacctgcatacaccgccagacctgcctgagggttat
gagcaaaggacaactcagcagggtcaagtctacttcctccacacacagactggagtcagc
acctggcatgacccccgggtgcccagggacctaagcaatgtgaactgtgaggagctgggc
ccactgccaccaggctgggagatcagaaacacagccacaggtcgcgtctactttgttgac
cacaacaatagaacaacacagttcacagacccgcggctatctgctaacctgcatctagta
ctcaacccaagtccaaatggttcccgtgtggccatggacagccaaaacactaacctcagt
catcctactcagttaaaggaccagggtggtcctggtgtccctcagcaagctatgtctcct
gcccagctgcctgaagaggcagagtgcctgacggtgcccaaatacaagagagacctggtg
cagaagctgaagatcctgcggcaggaactttctcagcaacaacctcaggccggccactgc
cgcatcgaggtctgccgtgaggagatatttgaggagtcgtaccggcaggtgatgaagatg
cgtccgaaggatctctggaaaagactgatgatcaaattcagaggagaagagggactggac
tatggtggggtagcaagggaatggttatacctgctgtcccacgaaatgctgaacccttac
tacggcctgttccagtattccagagatgacatctacactctacagattaaccccgactct
gctgtcaacccggagcacctgtcctacttccactttgtgggtcgtatcatgggcatggca
gtgtttcacggccactacatcgacggaggcttcactctgcccttctacaaacagctgctg
ggaaaatcgatcacgctggacgatatggagtcggtcgaccccgacctccacaacagcctt
gtctggatcctggacaatgacaccactggcgtcctggaccacactttttgtgtagaacac
aatgcctacggagaaatcatccaacatgagctcaaacccaacggcaagagtgtccccgtc
acagaggacaccaagaaggagtatgtcaggttgtatgtgaactggcgtttcctgcatgga
attgaggctcagtttctggctctgcagaaaggcttcaatgaggttattcctcaacacctg
ctcaaatcctttgatgagaaagaactggagctcatagtgtgcggcctgggaaagatcgac
atctctgactggaagtccaacacgcgtctgaagcactgcacccccgaaagcaacattgtc
aagtggttttggaaagccgtggagtcgtttgacgaggagaggagggcccggctgctgcag
ttcgttactggctcatccagagtcccactgcaaggcttcaaggctttacagggtgctgcg
gggcccagactcttcaccattcatcagatcgaagctaacaccaacaatcttcccaaagcc
catacctgctttaatcggattgacattccaccctatgagagctatgacaagctatacgac
aagctgcttactgcgatagaggagacctgtgggttcgcagtggaatga
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