Etheostoma cragini (Arkansas darter): 117936460
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Entry
117936460 CDS
T07493
Symbol
ldb3b
Name
(RefSeq) LIM domain-binding protein 3b isoform X1
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
117936460 (ldb3b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ecra04990
]
117936460 (ldb3b)
Domain-containing proteins not elsewhere classified [BR:
ecra04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
117936460 (ldb3b)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DUF4749
PDZ
PDZ_6
Motif
Other DBs
NCBI-GeneID:
117936460
NCBI-ProteinID:
XP_034715377
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All DBs
Position
21:5507451..5520144
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AA seq
316 aa
AA seq
DB search
MSTYTVTLNGPAPWGFRLQGGKDFNMPLTISRITPGSKAVGGSLAQGDIISAIDGVSTEG
MTHMDAQNKIKSATTKLSLTMQKSRRAAAFSTPRMDSPMPVIPHQKELEKIKEEVGAKHC
GEEVQMEQPLSYDVLQDKKPSKGKLFQVPKKDRELLSTLAKAPASPTPVSISTPGQRGQY
NSPVGLYSPKTVTEMMLMQGKLGQRSEASRAVSSLGGALPIKDSVVDCASPVYQAVIRPG
ETNQDMSEWARRAANLQSKSFRMLAHITGTEYLQDPDEEALLKSREKFESEVKGPRFAKL
KNWHHGLSAQILNVQE
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgagtacgtacacagtgactctgaatggccctgctccatggggcttcagactacaggga
ggaaaggacttcaacatgccgctcaccatctccaggataactccgggcagcaaggcggtg
ggcggcagcctggcccagggcgacatcatctcagccatagatggggtcagcactgagggg
atgacgcacatggatgcccaaaacaagatcaagtctgccaccaccaaactgtcactcact
atgcagaaatcaagacgtgctgcagcattttccactccaagaatggactcacccatgcca
gtcatccctcaccagaaggagttagaaaaaattaaagaggaggttggagctaaacattgt
ggagaggaggttcaaatggagcagccactgtcctatgacgttttacaggataaaaagcca
tccaaagggaaactcttccaagttcctaaaaaagatcgagagctcctctcaaccctggcc
aaagctcctgcctcccccacaccagtttccatttctacaccaggccaacgggggcagtac
aattccccagttggcctttactctcccaaaactgtcacagaaatgatgctgatgcagggc
aagttaggacagaggtcggaagcttcccgggcagtttcatcactgggtggagctctgcct
atcaaggactctgtggtggactgtgcgtctccggtttaccaggctgttatcaggcctgga
gaaacgaatcaggatatgtctgaatgggctcgtcgtgctgcaaacctgcagtccaagagc
ttcaggatgctggcccacatcactggcactgaatacctgcaagacccagatgaggaagcc
ctgttaaagtcaagagagaagtttgagtcggaggtgaaagggccccgctttgccaagctg
aagaactggcaccacgggctgtctgcacagatcctcaacgtccaggaataa
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