Etheostoma cragini (Arkansas darter): 117936485
Help
Entry
117936485 CDS
T07493
Symbol
si:ch211-141o9.10
Name
(RefSeq) probable endonuclease 4 isoform X1
KO
K10771
AP endonuclease 1 [EC:
3.1.11.2
]
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
117936485 (si:ch211-141o9.10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ecra03400
]
117936485 (si:ch211-141o9.10)
Enzymes [BR:
ecra01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
117936485 (si:ch211-141o9.10)
DNA repair and recombination proteins [BR:
ecra03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
117936485 (si:ch211-141o9.10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
DUF3247
Motif
Other DBs
NCBI-GeneID:
117936485
NCBI-ProteinID:
XP_034715419
LinkDB
All DBs
Position
21:14600133..14604182
Genome browser
AA seq
327 aa
AA seq
DB search
MGPKKRRARKRRSEEALGGEKQREGKEMEVEERGDGRRKNRCNNKYIGAHVGIQGGIWKA
VGSCTEMGGSSFALFLGSQRSWKRPALDHTAAAKFREQCSLQEYDPAHILPHGSYLMNCG
SPKEDVFEKSQALLVDELSRCSLLGLNLYNFHPGSSLGSITTEQCVEKIAGSINHAHQQT
PAVVTVLENMSGQGSTVGGKFSELKSIIDKVRDQTRVGVCLDTCHAYAAGYDVAVEGGVK
AMLDEFDQEVGLHYLKAVHLNDSKGKLGCHLDRHEDIGKGHIGISAFQDIVNEPRLDNIP
LILETPGRPGFGYAEQIELLYSLCKKK
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgggtccgaaaaagcgaagagcaaggaaaaggagatccgaggaggctttgggaggagaa
aagcagagagagggcaaggagatggaggttgaggagagaggagacgggaggagaaagaac
cgctgtaataacaaatacattggagctcatgttggaattcaaggtgggatatggaaagca
gtggggtcctgcacagagatgggtggcagcagtttcgctctgtttctgggctcccaacgg
tcatggaagaggcctgcactggaccacacagctgcagccaagtttcgggagcaatgttct
ctacaggagtatgacccagctcacatcctgcctcatgggtcctacctgatgaactgtgga
tctcctaaagaggatgtgtttgagaagagccaggccctgctggtggacgagctcagccgc
tgcagcctcctgggcctcaacctctacaacttccaccctggttcttccctgggctccatc
accactgagcagtgtgtggagaagatagcaggatctattaatcatgctcaccagcaaaca
cctgctgtggttacagtgttggagaacatgagtggtcagggcagtacggtgggtggaaag
ttctctgagctaaagagcatcatagacaaagtgagagaccagaccagagtaggagtgtgt
ctggatacctgccatgcctacgcagcaggatatgatgtggctgtagagggaggagtgaag
gccatgcttgatgagtttgatcaggaagtggggctccactatcttaaagccgtccatctc
aatgactccaaaggtaaactaggctgccacctcgatcgccatgaagacattggtaaaggt
cacatcggaatctctgctttccaagacattgtcaatgagcccagactggacaacatccct
ctgatactggagacaccaggacggccagggttcggatatgctgagcagattgaacttctc
tattccctctgtaagaaaaaatag
DBGET
integrated database retrieval system
