Etheostoma cragini (Arkansas darter): 117936512
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Entry
117936512 CDS
T07493
Symbol
tap2t
Name
(RefSeq) antigen peptide transporter 2
KO
K05654
ATP-binding cassette, subfamily B (MDR/TAP), member 3 [EC:
7.4.2.14
]
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra02010
ABC transporters
ecra04145
Phagosome
ecra05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
117936512 (tap2t)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
117936512 (tap2t)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
117936512 (tap2t)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ecra02000
]
117936512 (tap2t)
Enzymes [BR:
ecra01000
]
7. Translocases
7.4 Catalysing the translocation of amino acids and peptides
7.4.2 Linked to the hydrolysis of a nucleoside triphosphate
7.4.2.14 ABC-type antigen peptide transporter
117936512 (tap2t)
Transporters [BR:
ecra02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
117936512 (tap2t)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
AAA_21
AAA_30
SMC_N
AAA_22
nSTAND1
AAA_29
AAA_16
RsgA_GTPase
AAA_15
DUF6659
AAA_PrkA
Rad17
NTPase_1
Motif
Other DBs
NCBI-GeneID:
117936512
NCBI-ProteinID:
XP_034715493
LinkDB
All DBs
Position
21:1808752..1818671
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AA seq
713 aa
AA seq
DB search
MDPVSACGLFIIVFDAVLCLALWAGLVVLKCSSCGGLAGVWAFGAAKWAVLHVFTSVLTD
GKPQAVLRRLVALLCLLSPVFESGRVFMAPPSEAYTGPSPNLSMLLLGLVSSSLACVVWE
KTLCGDSTKTKDSTEQDAWPLLMRMLKYFKPDTFYLIAAFGFLILGVICDTYIPLYQGNV
IDMLRGELLQTSFFYAVGQLALVSLGSALFSGFRGGIFMCTLTRLNRRLKHLLFHTLLQQ
DMHFFEENNPGRLSSRLHSDVDRMGRTVALNANVLVRSTVKTGLMLTVMLGLSWELTVLT
CIEMPLLAFLQNKYITLSKELKDQMQDCHAQNKDLAFQTFSGIHTVRSFKAEKDELRRFK
ESLDRMCAVQRRSNIYSSVFCLMRRLVSLGIKILMLVQARGLILAGHLSIGSLVSFFLYQ
KPMSVNLKELLYCCGDTMSTVGVISKVFSYLDRTPQCEKTGELAPEKLEGRVVFQNVTFT
YPSASEDKPALKSVSIELRPGRMTALVGPSGSGKSSCVSLLKRLYEPQGGQILLDGEPLH
HYNHKYLHQKMALVSQNPVLFSGSLKYNITYGLKDCPVEKVKEAAKKANADVFISKLEEK
YDTDVGECGGKLSEGQRQSIAIVRALVREPQVVILDEATSKLDVEVQHAVLQEVLARGRT
VLVVTHQLQTVEKADHIVFLEKGAVVEEGTHQELMAKRGRYHRLKEELFSELS
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atggatccagtgtcagcatgtggattgttcattattgtgttcgacgcggtgctttgtttg
gcgctgtgggccggactggtggtgctgaagtgctccagctgtggtggactggcaggcgtg
tgggcctttggagcagcaaagtgggccgttctccatgttttcacatccgtgctgacggat
gggaagccccaggcggtgctccgcaggttggtggcgctcctctgcctcctctctcctgtg
tttgaaagcggacgggtctttatggcgcctccctcggaggcgtatacaggaccgtctcct
aacctcagcatgctgctcctgggcctcgtgtcctcatccctggcctgtgtggtttgggaa
aaaacactctgtggtgattcaacgaagacaaaggacagcactgaacaggatgcctggcca
ctgcttatgaggatgctgaaatacttcaaaccagacaccttctaccttattgcagctttc
ggtttcctcatcttaggtgtcatctgtgatacatacatcccactgtatcagggcaacgtc
attgatatgctcagaggtgaactacttcagaccagcttcttttatgcagttggacagctg
gcacttgtctctcttggaagcgctctgttctccggctttagaggaggcatattcatgtgc
accctgaccagactgaacaggagactgaaacatctgctgtttcacaccctcctgcagcag
gacatgcacttctttgaggagaacaatcctggacgtctgtcctcccgcctgcactcggat
gtggacaggatgggccgcacagttgcactgaacgccaacgtgctggtccgcagcacagtc
aaaaccggcctcatgctcacggtgatgctaggcctgtcctgggagctcactgtgctcacc
tgcatagagatgccacttctggccttcctgcagaacaaatacatcaccttgtccaaggag
ctgaaagatcagatgcaggactgccacgctcagaacaaagacctggccttccagaccttc
agcgggattcacacggtccgaagctttaaggcagagaaagacgaactgagaaggtttaag
gagtctctggaccgcatgtgcgccgtgcagagacgttcaaacatctacagctcagtcttc
tgcttaatgcgcaggttggtgagtctggggataaagatactgatgctggtccaggcccga
gggctcatcctggcgggtcaccttagcattggtagtctcgtctccttcttcttgtaccag
aagcccatgtcagtcaatttaaaggagcttctgtattgctgcggagacacgatgtccacc
gtcggagtcatctccaaagtgttcagttatcttgacagaacaccacagtgcgagaagacg
ggagagttagctcctgagaagctggagggaagagttgttttccaaaatgtcaccttcacg
tatccctcagcttctgaagacaaaccagctctgaagtcggtttctatagaacttcggccg
ggacggatgaccgccctggtgggtccctccggcagtgggaagtcttcctgtgtcagcctc
ctgaagaggctgtatgaacctcagggggggcagatcctgctggacggagaaccgctgcac
cattacaaccacaaataccttcaccaaaagatggccctggtatcccagaatcccgtgctg
ttttctggttcgctgaaatacaacatcacgtacggcctgaaggactgccccgttgagaag
gtgaaggaagcggcaaagaaggccaacgctgacgtcttcatctctaaactggaggagaaa
tatgacacagatgtaggtgagtgtggaggcaaactttcagagggacagaggcagagcatc
gccatcgtcagggctctggttcgagagccgcaggtcgtcattctggatgaggctaccagc
aaactggatgtagaagtgcagcacgccgtgctgcaggaggttctggcccgggggcggacc
gtcctggtggtgactcaccagctgcagactgtggagaaggcggatcacatcgtcttctta
gagaagggagccgtcgtggaggaggggacgcaccaggaactcatggccaagagaggacgc
taccatcgtctgaaagaggaactcttctctgaactcagctga
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