Etheostoma cragini (Arkansas darter): 117936516
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Entry
117936516 CDS
T07493
Symbol
clockb
Name
(RefSeq) clock circadian regulator b isoform X1
KO
K02223
circadian locomoter output cycles kaput protein [EC:
2.3.1.48
]
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecra03000
]
117936516 (clockb)
03036 Chromosome and associated proteins [BR:
ecra03036
]
117936516 (clockb)
Enzymes [BR:
ecra01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.48 histone acetyltransferase
117936516 (clockb)
Transcription factors [BR:
ecra03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
117936516 (clockb)
Chromosome and associated proteins [BR:
ecra03036
]
Eukaryotic type
Histone modification proteins
HATs (histone acetyltransferases)
117936516 (clockb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_11
PAS_3
HLH
PAS
PAS_9
Motif
Other DBs
NCBI-GeneID:
117936516
NCBI-ProteinID:
XP_034715539
LinkDB
All DBs
Position
2:17235548..17259745
Genome browser
AA seq
908 aa
AA seq
DB search
MTSSVGDDCSIFDGLMEEDEKDKAKRVSRNKSEKKRRDQFNVLIKELGTMLPGNTRKMDK
STILQKSIDFLCKHKEIAAQSESSEIRQDWKPPFLSNEEFTQLMLEALDGFFIAIMTDGN
ILYVSESVTSLLEHLPTDLVDQNMLNFLPIGEHSDVYKALSTHPTDHENLSSDYLKTKNH
LEFCCHLLRGAIDPKEPPVYEYVKFIGNFKSLNNVPNVTRNGLAGVLQRSLQPAFDDQVC
FVATVRLAKPQFIKEMCTVEELNEEFTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGY
DYYHVDDLETLAKCHEHLMQYGKGKSCYYRFLTKGQQWIWLQTHYYITYHQWNSRPEFIV
CTHTVVSYAEVRAEHRRELGIEESNPEVTNKSQDSGSESQLNTSSLKEALERFDRSRTHS
TSSQSSHKSSSHVSDNTCTSTASKLNMDTATPPRQSLGSTMEMTSQRRSSISSQSMSSQT
TGQSVTPGMITQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQVQVQQQ
QQLQTNVQPVMEFSAQVNAMQHLKEQLEQRTRLIQANIQRQQDELRHIQDQLQKVQGQGI
QMLLQQAGGAMNVQLPQVGLVPQATTLNSQVQQTTINPAHSGTQQLTIQQQAPPPQQNLQ
QQQTNALTQEFISCPSLLPHITTLQPQRQPQQPPQAQTQGSVSTPLYNTMMISQPGQPNV
LQISTSLPQTNTQQGTAVATFTQDRQIRFPAGQQLVTKLVTAPMACGAVMVPTSMFMGQV
VTAYNPFGGQQQGGQTQTLTLQPAQPPQGQPDQNQTAVVSQGGQQGQQQQQPFIQGTRLL
HSNQSTQLILQAAFPLQQQGTFTQATHQQQPQLQSHHQRHQQQLKPQPQKQPKTQSSHRT
DSVSSQPQ
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
atgacatcaagtgtaggggatgattgtagcatctttgatgggttgatggaagaagatgaa
aaggacaaagcaaaacgtgtgtctcgtaacaagtctgagaagaaacggagagaccagttc
aatgtcctcatcaaggaactcggcacaatgttgccgggcaacaccaggaagatggacaag
tccaccatcctgcagaaaagcattgacttcctgtgtaaacacaaagagatcgcagcccag
tcggagtcgagtgagatcaggcaggactggaagcctccatttcttagcaatgaggagttc
acccagctcatgctggaggctctggatgggttctttatagcaataatgacggatgggaac
atcctctacgtctctgagagtgtcacctcactactggaacatctaccgacggacttggtg
gaccagaacatgttaaacttcctgccaattggggaacactctgatgtgtacaaggctctg
tccactcaccccaccgaccacgagaaccttagctccgattacctgaagactaagaaccac
ctggagttctgctgccatttgctgcgaggcgccattgaccccaaagaaccacctgtctat
gaatatgtaaagttcattggcaacttcaagtcactgaacaatgttcccaacgtgacgagg
aatggactagcaggggtgttacagcggtcactacaacctgcattcgatgaccaggtgtgc
tttgttgccacagttcggctggccaaacctcagttcatcaaggaaatgtgtacagtggag
gagctcaatgaagaattcacctcgaggcacagtctagaatggaagttcctcttcttagac
catagagctccaccaatcataggctacctgccttttgaggttctgggaacatcagggtac
gactactaccatgtggacgacctggagacattagccaagtgtcacgaacacttaatgcag
tatggtaaaggaaagtcttgctactatcgtttcctgactaaaggtcaacagtggatctgg
cttcagacgcactactacatcacctatcatcagtggaactctcgacctgagtttattgtc
tgtacccacacagtagtcagctatgcagaggtgagggcagaacatcgcagagagcttggc
attgaggagtctaacccagaagttacgaataagagtcaggactctggctcagagtcacag
ctgaatacatccagcctcaaggaggctctggagcgatttgaccgcagccgaacacactca
acctcctcacagagttctcacaagtcctcatcacatgtctctgacaacacctgcacttca
acagcctccaagctaaacatggacacggccacacctcctcggcagtctctgggctccacc
atggagatgacatcacagcgtcgctcatccatcagcagtcagtctatgagctctcagacc
acaggccagagtgtaactccaggtatgatcactcagcaacaacaacaacaacaacaacaa
caacaacaacaacaacaacaacaacagcaacaacagcagcagcaacaacaacaacaacag
caacagcagcaacaacaacaacagcagcagcagcagcaacaagtacaagtacaacaacaa
caacagctacagacaaacgtacagccggtgatggaattctcagcgcaggtgaatgccatg
cagcatctaaaggagcagctagaacagagaacaagactgatccaagccaacatccagcgg
cagcaagacgagctgagacacatccaagaccagctgcagaaagtccagggacagggcata
cagatgttgctgcagcaggcgggtggagcgatgaacgtgcagcttccccaggtggggttg
gtcccacaagcaactactttgaacagtcaggtccagcaaacaacaattaaccctgcccat
tcaggaactcagcagctcactatccagcagcaggcaccacccccccagcaaaacctacag
cagcagcagaccaacgccctcacacaggaattcatatcatgtccctccctccttccccac
attactactctccagccccagcgtcaaccccagcaacctccccaggctcagacccagggc
tctgtatctactccactatacaacaccatgatgatttctcagccgggtcagcccaacgtg
cttcaaatcagcaccagcctgccacagaccaacacacagcaaggcaccgcagtggccacc
ttcacacaggaccgacagatccggttcccagcagggcagcagctggtgactaagcttgtg
acagctccaatggcatgtggagcagtcatggtacctacctccatgttcatgggacaggtg
gtcactgcgtacaacccgtttggtgggcaacagcagggagggcaaacgcagaccctgaca
ttgcaaccagcccaaccaccccaaggtcagcccgaccaaaatcagactgccgtagtgtct
cagggtggccagcaggggcagcagcaacaacagccattcatacagggcactcgtcttctc
catagtaaccagtccacccagctgattcttcaggcagctttcccactccaacagcagggc
accttcacgcaggcaacacaccaacagcaaccgcagctacaatctcaccaccagaggcac
cagcagcagctaaaaccacagccccagaaacagccgaaaacgcagtcatcacacaggact
gacagtgtcagcagccaaccacagtaa
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