Etheostoma cragini (Arkansas darter): 117936560
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Entry
117936560 CDS
T07493
Symbol
vps35l
Name
(RefSeq) VPS35 endosomal protein sorting factor-like
KO
K25731
VPS35 endosomal protein-sorting factor-like
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ecra04131
]
117936560 (vps35l)
Membrane trafficking [BR:
ecra04131
]
Protein recycling
Others
Retriever complex
117936560 (vps35l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GemA
Motif
Other DBs
NCBI-GeneID:
117936560
NCBI-ProteinID:
XP_034715629
LinkDB
All DBs
Position
21:complement(15041286..15058478)
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AA seq
970 aa
AA seq
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MAAVQWRSRGRNYEAELQKCRPEAALVEFGDYHPLKSIMVTDTKTRRGARKGSTSSSSSS
SSSAPPDPLSSMLDGTDPLSLFAAASATETPAMSHSASTGDLGRKKWEKEKEEEVVGPDF
EPWSLKRGEILARFTTTEKLSINLFMGSDRGNASSPGSTAVSEKVRTRLEELDDLEEGSQ
RELLNLSQQEYANRIEELNQSLKEAWASDQKVKALKIVIQCSKLLSDTSVIQFYPSKFVL
ITDILDTFGRLVYDRIWTMCSDPRPLPDSFTVDDVNDTAKETCLNWFFKIASIRELLPRL
YVEAAILKCNRFLNKCGIQETLPRLTAMIRGIGDPLVAAYTRAYLCRVGVEVAPHLKDSL
NRNFFDLLGTFRQISSESVQNQLVLQRVEVPEYLTLYSPAISWILQCIAYRAPEPLLTEM
MERCKKLGNNALLLNSVMRAFRPEFVAARATDFIGMIKDCDEAGFPKHLLFGSLGRSVAC
ADPPESERLTILNEAWKVVTKVRSPQDYVNCAEIWVEFTCRHFTKREVNTVLADIIKHMT
PDRAFEDAYPQLQSVIRKILTYFHDFSVLFSMERFLPFLDMFQKDSVRVEVCRSIMEVFI
RHQVEPTRDPVILNAMLHICKTMHDSVNALTLEDEKRSLALLIIGFIRMVCFGRDFEQQL
SFCVEARATFCNLESVMVQLIHTVNQLAMETNRVMRGSHSRKTAAFVRACAAYSFITIPS
LSSIFSRLSLYLLSGQIALANQCLSQADAFLKAAVSLLPEVPRSISVEGKLRASESFLLD
FINNFLATLLVVPDHPEHGVLYLVRGLLNMIQDYTWEENSDAKVRVYVSALPLLAAMSQE
TYLYSIPKVDSNETLYGGDPKFLLEINKLSETLIGQVLDHLKALGRDEQSTRRQGALAFS
LFGVLLAHGDLRTNKLSQLAVNLWNLSHKHGYCETRVSVRTLEFIKQQARQADMSHLLDT
VQRLVLQSRT
NT seq
2913 nt
NT seq
+upstream
nt +downstream
nt
atggctgcggtgcagtggcgatccagggggcgcaactatgaggcagagctgcagaaatgc
cgtcctgaggctgctctggttgagtttggagactaccatcccctcaaatccatcatggtg
acagatacaaagacccgccgtggggcacgtaaaggcagcacctcctcctcttcgtcctcc
tcctcctcggcacccccggaccccctcagctccatgctggatgggaccgaccctctctcc
ctgtttgcagcagcctcggccactgagactcctgccatgtcacacagcgcctccacaggg
gacctggggaggaagaagtgggagaaggagaaggaggaagaggtggtgggtccagacttt
gagccctggtccttaaaacgaggagagatcctggccaggttcaccaccactgaaaaactc
tcaattaatcttttcatgggttctgatcgaggaaatgcttcaagtccaggatccaccgct
gtgtcagagaaagttcgaactcgcctcgaggaactggatgatctggaggagggttcccag
agagagctgttgaacctctcccagcaggagtacgctaaccgcatcgaggagctgaaccag
tccctgaaggaggcctgggcctcggaccagaaggtcaaagccctgaagatcgtcatccag
tgctcaaagcttctgtccgacacctcggtgatccagttctaccccagcaagtttgttctc
atcaccgatatcctcgacactttcggccgcctggtgtacgatagaatctggaccatgtgt
tcagacccacgtcccctaccagactcgttcacagtcgacgatgtgaacgacacggccaag
gagacgtgcctcaactggttcttcaagatcgcgtccatcagagagcttctgcccagatta
tacgttgaagctgctattctcaagtgcaaccgcttcctgaacaaatgcggtattcaggaa
accctccctcggttgacagccatgatcagagggattggagaccccttggtggcagcgtac
accagagcttacctctgcagggtgggcgtggaagtcgccccccacctgaaagacagcctg
aaccgcaacttcttcgacctgctgggcactttccggcagatcagcagcgagagcgtccag
aaccagctggtcctgcagagggtggaggtccccgagtacctgacgctttattcccccgcc
atcagctggatcctgcagtgcattgcctaccgagctccagagcctctgctaacggagatg
atggagagatgcaagaagctggggaacaatgctttgctgctgaattccgttatgagggcg
ttcaggccagagtttgttgcagccagagccaccgacttcatcggtatgattaaagactgc
gacgaggccggcttcccaaagcatctgttgtttggctctttgggccgcagtgtggcctgt
gccgatccgccagaatcggagagactgacgatcctaaatgaggcctggaaggttgtgaca
aaagtccgcagccctcaggattacgtcaactgcgctgagatctgggtggagttcacctgc
cgacacttcacaaaacgtgaggtcaacacggttctggctgacatcatcaaacacatgacc
cctgaccgggcgtttgaggacgcttatcctcagctgcagtcagtgatcaggaagatccta
acctacttccatgacttctccgtcctcttctccatggagcgtttcctgccgttcctagac
atgttccagaaggacagtgtgagggtggaggtgtgcagatccatcatggaggtcttcatc
agacaccaggtagagcccaccagagacccggtcatcctgaacgccatgttgcacatctgc
aagaccatgcacgactctgtcaacgctctcactcttgaggatgagaaaagatctttagct
ctcctgatcatcggcttcatccgcatggtttgttttggtcgtgactttgagcagcagttg
agtttctgtgtggaggccagagcgaccttctgtaacctggagtcggtgatggtgcagctc
atccacacggtgaaccagctggcaatggagaccaaccgggtgatgagagggagtcactcc
cgcaagacagcggcctttgtcagggcgtgcgctgcttacagtttcatcaccatcccgtct
ctcagcagcatcttcagtcgtctcagcctctatctgctgtctggtcagatcgcgttggca
aaccagtgtctctcccaggcggatgctttcctaaaggcggcggtcagtcttctcccggag
gtccctcgctccatcagcgtggaggggaaacttcgagcgtctgagagcttcctgctggac
ttcatcaacaacttcctggctacgctgctggttgtcccggaccatccagagcatggcgtg
ctctaccttgtgcgcggtctactcaacatgatccaggattacacctgggaggagaacagc
gatgccaaggtgcgggtctatgtcagcgctctgcccctgctggccgctatgagccaggaa
acctacctctactccatccctaaagtggactccaatgagactctttatggaggagacccc
aagttcctattggagatcaacaagctgagcgagactctgattggacaggtgcttgaccat
ctgaaggcgctcggccgggacgagcagagcacacggcgccagggcgctctggccttctcc
ctgttcggcgtgctgctggctcacggcgacctgaggaccaacaagctgagccagctggcc
gtcaacctgtggaacctcagccacaaacacggatactgtgagacccgcgtctcggttcgg
accctggagttcatcaaacagcaggcccggcaggcggacatgagccacctgttggacaca
gtccagcggctggtgctgcagtcccgcacctga
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