Etheostoma cragini (Arkansas darter): 117936646
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Entry
117936646 CDS
T07493
Symbol
itga3b
Name
(RefSeq) integrin alpha-3b
KO
K06482
integrin alpha 3
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04510
Focal adhesion
ecra04512
ECM-receptor interaction
ecra04810
Regulation of actin cytoskeleton
ecra04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
117936646 (itga3b)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
117936646 (itga3b)
09142 Cell motility
04820 Cytoskeleton in muscle cells
117936646 (itga3b)
04810 Regulation of actin cytoskeleton
117936646 (itga3b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ecra04147
]
117936646 (itga3b)
04515 Cell adhesion molecules [BR:
ecra04515
]
117936646 (itga3b)
04090 CD molecules [BR:
ecra04090
]
117936646 (itga3b)
Exosome [BR:
ecra04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
117936646 (itga3b)
Cell adhesion molecules [BR:
ecra04515
]
Integrins
Integrin alpha subunits
117936646 (itga3b)
CD molecules [BR:
ecra04090
]
Proteins
117936646 (itga3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_2
Integrin_A_Ig_1
FG-GAP
FG-GAP_3
FG-GAP_2
Collectrin
Fer4_22
Motif
Other DBs
NCBI-GeneID:
117936646
NCBI-ProteinID:
XP_034715812
LinkDB
All DBs
Position
21:complement(12733799..12762464)
Genome browser
AA seq
1055 aa
AA seq
DB search
MSPRLLLCAVLAVYHGTQIGNGFNIDERFPVIKEGKTKGSFFGFSVAVHQQTEGAKKYLL
LAGAPKEKAEALQNVNETGAVYSCPITTDTADCSRMDLVSTTNPSEIVEGMWLGVTVASQ
RYHPAGRVLACGHRYVKIMQGGTEEQWRMIGKCYVRSNDLTFDPNDEWQTYSYEVCNPNF
DKEFEGLCNMGMSGGMTDTDVYIGAPGSYVWQGNVHVTWRDPDPDLAWDSTSKDFGQLNI
RNSYMGYSVVEERKLLSHTDYTVVTGSPRDESKGSVIFGSKTDKNIELVLTLPGEQVGSY
FGNSLAVTDLNNDDWNDLIVGAPFHFDRMKDEGGAVYIFMNENGSFQKTASVVLKGPAAS
GFGFAVAAIGDVNQDGFQDFAVGAPFHDTGKVYIWMGSKKGISKEPSQVIEGKSVGNGGF
NTFGYSINGGMDMDGNSYPDILVGSLDDRMALLRARPVIHLTKDFSVEPKIVDPNQCLGS
TPCITATLCMSFTLSNGNKDFKKNTTVKYTVKADVDRRSPRVRFEDNDDTYIGFLSMPSS
KSICHTLKLIAMVPVRDKLQPVVFSLSMSLDEQKPNSRRSLQNLDSFPIISQEQKLTQRA
EINFQRECGLDNKCSSNLQLTAQFVDNKKSPYLRHGKSQILPFNSSVKIIGLMVEVTNVP
GQGKLGEDAHQAMLNVTIPDALSYSGVESEDRNVQCRLTDTVICDLGNPLKGNENVTLLL
KFETSGINLYTQEIESQLLLSTLSEQSDLKPVPLSLLIENTILPSFSILNPLVQTEFSGT
VMGMSAMVNTSDVGSLVEFTFDVNMRGQPLGHMGTLAVEFEWPYEVANGKWLLYLTKIVV
KGESEVECKPPGEVVNMLNLTLSGIDRKRTKRQITVTDEDDMKKQHITEPQAAITLLTPR
KETYLLECSKGTARCVTFTCPLVNMTDSAKIYVRSRLWNSTMLEDYHNALRITVRGQATL
KLIKNKSNIKMDSQTNMFTVEIEPLEGVEAPYELPLWIIISAVVAGVFLLGIIILILWKC
GFFQRASRREMYEAKAQKAEMKIQPSETERLTEDY
NT seq
3168 nt
NT seq
+upstream
nt +downstream
nt
atgtctcccagactattgctctgcgctgttttggctgtgtaccacgggacgcaaatcggc
aatggatttaacatagatgaacggtttcctgtgatcaaagagggaaaaaccaaagggagc
ttctttggattctcagtagctgtgcatcaacagacggagggcgcaaaaaagtacctgctt
cttgcaggagcaccgaaagagaaagctgaagctctacaaaatgtcaatgaaacaggcgcc
gtctactcctgtcccattacaactgatacggccgactgctccagaatggacctggtcagc
acaacaaatccatctgagattgtggagggcatgtggctgggtgtgacggtggccagtcag
agataccatccagcgggacgcgtgctggcatgtgggcatcgctatgtgaagatcatgcaa
ggcggcacagaggaacagtggcggatgataggaaagtgctacgtcaggagcaacgacctg
acctttgacccaaatgacgaatggcagacttacagttatgaggtctgcaaccccaacttt
gacaaggagtttgagggcctgtgcaacatgggcatgtcaggtggcatgacagacactgat
gtctacatcggggctccaggcagctacgtgtggcaaggaaatgttcacgtaacttggaga
gatccagacccagatcttgcctgggactctacaagcaaagactttggacagctgaatata
cgaaacagttatatgggttactcagttgttgaggagaggaagctgctgagccataccgac
tacacagtggtgacagggtctcccagagacgagtccaagggctcggtgatattcgggagt
aagactgacaaaaacattgaattggtgcttacactccccggggaacaagtgggctcgtac
tttgggaacagcctggctgtcactgacctcaacaatgacgactggaacgacctgattgtg
ggcgccccatttcactttgaccgtatgaaggatgagggaggagcagtgtatatcttcatg
aatgaaaatggatcgttccagaagactgccagcgtggtgctgaagggtccagcggcctct
ggatttggctttgcagtggctgccatcggcgatgttaaccaagacggattccaagacttt
gcagtgggagctcccttccatgacacaggaaaggtctacatttggatgggaagtaaaaag
ggaatctcaaaggaacccagtcaggtaatcgagggtaagtcggtgggaaatggaggattt
aacacgttcggctactccatcaacggggggatggacatggatggcaacagttaccctgac
atcttagttggctccctggatgatcgcatggccctgctcagggctcgaccagtcatccac
ttaactaaggacttcagtgtcgagccaaagattgtggaccccaatcagtgtcttggaagt
acaccatgcatcacagcaactctgtgtatgtctttcactctaagcaatggaaacaaagac
ttcaagaaaaataccacggtgaagtacacagtgaaggccgacgtggacaggagaagccct
cgtgtccgttttgaggacaatgatgacacatatatcggctttttgagcatgccatcttcc
aaatccatttgtcatactctgaaactgattgcaatggtgcctgtgagagacaaactgcag
ccagtggtcttttccctcagcatgtccttagatgaacaaaaacctaattcaagacgttct
ctgcagaacctagactcttttccgattatcagccaggagcagaaactcactcaaagagct
gagattaactttcagagggagtgtggcttagacaacaaatgtagcagtaacctgcagctg
acggcccaatttgttgacaacaagaaaagcccttacctaaggcatggcaaatcgcagata
ctccctttcaacagcagtgtaaagattatagggctgatggtggaggtgaccaacgttcct
ggtcagggaaagctaggtgaagacgcccaccaggccatgctcaatgtcaccatccctgac
gcgctgagttactctggggtcgagtctgaggatcgtaatgtacaatgccgtctgaccgac
acagtgatttgtgacctggggaatccacttaaaggcaatgaaaatgtaacacttttactt
aagtttgagacctcagggatcaatttgtacacacaggagattgagtcccagctgcttctg
tccactcttagtgagcagagtgacctaaagcctgtgcctctgagcctgctgattgaaaac
accatcctcccttctttctccatactgaacccgctggtgcaaacagaattcagtgggacg
gtgatgggcatgtcagccatggtcaacaccagtgacgtgggcagccttgtcgagttcaca
tttgatgtgaacatgaggggacagcccctgggacacatggggaccctggctgtggagttt
gagtggccctatgaggtagccaatggcaagtggctgctgtacctgacgaagattgttgtt
aaaggggaatctgaggtggaatgtaaacctcctggagaagttgtcaacatgcttaaccta
actttgtcagggattgaccgaaagcgtactaaacgacagatcacagtgactgatgaagat
gatatgaaaaaacaacatattactgagccacaggcagccatcacgctgctcactcctcgc
aaagagacctacctgttggaatgctccaaagggacagcacgttgcgtgacgttcacctgc
ccgctggtcaacatgacagactcagccaagatttatgtccgctctcgtttgtggaacagt
actatgctagaagactatcacaacgctctgagaattacggtcagaggtcaagccacactg
aagctcattaaaaataaatcaaacatcaagatggacagtcagaccaacatgttcacagta
gaaatagaaccactggagggggtggaggcaccctatgagctcccgctgtggatcatcatc
tctgcagttgtagcgggagtgttcctactgggaataatcattcttatattatggaagtgt
ggcttcttccagagggccagcaggagggaaatgtatgaggccaaagcccagaaggctgag
atgaagatccagccctctgagacagagaggctgaccgaggactactga
DBGET
integrated database retrieval system
