Etheostoma cragini (Arkansas darter): 117936756
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Entry
117936756 CDS
T07493
Name
(RefSeq) transcription factor Sox-9-A-like
KO
K18435
transcription factor SOX9 (SOX group E)
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecra03000
]
117936756
Transcription factors [BR:
ecra03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
117936756
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
Sox_N
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
117936756
NCBI-ProteinID:
XP_034716021
LinkDB
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Position
21:15930171..15934304
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AA seq
497 aa
AA seq
DB search
MNLLDPYLKMTEEQDKCLSDAPSPSMSDDSAGSPCPSVSGSDTENTRPSENGLLGVDGEF
KKDEDDKFPACIRDAVSQVLKGYDWTLVPMPVRINGSSKNKPHVKRPMNAFMVWAQAARR
KLAYQYPHLHNAELSKTLGKLWRLLNEGEKRPFVEEAERLRVQHKKDHPDYKYQPRRRKS
VKNGQSESEDGSEQTHISPNAIFKALQQADSPASSMGEVHSPGEHSGSQGPPTPPTTPKT
DISAGKMDLKREGGLRSQPDGPGGRQLNIDFRDVDIGELSSDVISHIETFDVNEFDQYLP
PNGHPGVAGNPAPVTYTGSYSISGGGAPVSPQAGVSAAWLAKSQNQPGQQQQQQHTLTPL
GGAGSEATQAQHRTQIKTEQLSPNHYTEQQQGSPQHATYNPFSLQHYSPPQPSSYPAITR
AQQYDYSDHQGGATASYYSHAGAGQGSGLYSTFSYMSGGSQRPMYTPIADNTGVPSIPQS
SPQHWEQVPVYTQLTRP
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgaatctcctcgacccttacctgaagatgacggaggaacaagacaagtgtctttccgac
gctccgagcccgagcatgtccgacgactccgcgggctccccgtgtccgtccgtgtcgggt
tcggacaccgagaacacccggccatcggagaacgggctgcttggcgtggacggagagttc
aagaaggacgaggatgataagttccccgcttgcatccgcgatgctgtgtcccaggtgctc
aagggctacgactggaccctcgtgcctatgcccgtgcgcattaacggatcttctaagaac
aagcctcacgttaagagaccgatgaatgcctttatggtgtgggctcaggcggcgcgtagg
aagctggcatatcagtacccacacctgcacaacgcggagctcagcaaaactctaggaaaa
ctctggagacttctcaacgaaggggagaagcggccgtttgtggaggaggctgagcggctc
cgggtgcagcacaagaaggatcacccggactacaaataccagccccggcggaggaagtcg
gtgaagaacgggcagagcgagtcagaggacggcagcgagcagactcacatttcccccaat
gccatcttcaaagcgctgcagcaggcggactccccggcctccagcatgggagaggtgcac
tctcctggcgagcactcaggctcccaggggccccctactccccccaccaccccaaagaca
gacatcagcgcaggcaaaatggacctcaagcgtgaaggtggcctccgctctcagccagac
ggccccggcgggcgccagctcaacattgacttccgcgacgtggacatcggcgagctgagc
agcgacgtcatctcccacatcgagacctttgacgtcaacgagttcgaccagtacctgccg
cccaacgggcaccccggcgttgccggcaaccccgcgccggtcacctacaccggcagctac
agcatcagtggcggcggggcgccagtcagcccacaggcaggagtgtctgcagcgtggttg
gctaaaagccagaaccagccggggcagcagcagcagcagcagcacactctgaccccgctg
gggggtgcaggctcagaggcaactcaggcccagcaccggacccagatcaagacggagcag
ctgagcccgaaccactacactgagcagcaacagggctcgccgcagcacgccacctacaac
cccttcagcctgcagcactacagccccccccagccttcctcctacccggccatcaccagg
gcacagcagtacgactactccgaccaccagggtggcgccactgcatcctactacagccat
gcgggggctgggcagggctcggggctctactcgactttcagttacatgagcggcggcagc
cagaggcccatgtacacgcccatcgccgacaacacgggggtgccctccattcctcagagc
agcccgcagcactgggagcaggtgccggtttacacccagctcaccagaccctga
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