Etheostoma cragini (Arkansas darter): 117936769
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Entry
117936769 CDS
T07493
Symbol
trub1
Name
(RefSeq) probable tRNA pseudouridine synthase 1
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ecra03016
]
117936769 (trub1)
Enzymes [BR:
ecra01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
117936769 (trub1)
Transfer RNA biogenesis [BR:
ecra03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
117936769 (trub1)
Prokaryotic type
117936769 (trub1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Pus10_C
GAIN_A
Motif
Other DBs
NCBI-GeneID:
117936769
NCBI-ProteinID:
XP_034716041
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All DBs
Position
21:17429527..17443913
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AA seq
271 aa
AA seq
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MAGNITNTAAPITSSLSKLQSLNGLFAIYKKQGPTSADVLNTLKEVLLKEAGVKNPNPRK
RRKQSLKMGHGGTLDSAASGVLVVGVGNGTKMLSTMLAGSKKYVAVGELGKATDSLDATG
SVILEKDFEHITRLDIEEKLKAFTGDIMQVPPLYSALKKDGQRLSVLLKKGHQVEAKPAR
PVTVYNLTLQEFKPPLFTLDIECGGGFYVRSLVDDLGKALSSCAHVKDLIRTKQGQFTLE
EHALPEEQWTLEHILRSLQPCSDAELPGADT
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atggcaggaaatataactaacactgcggctcctattactagttctctatctaaactacag
tctttaaatgggttgtttgcgatatataagaaacaaggaccgacatctgcagacgtgttg
aatacactcaaagaagttttactcaaggaagctggtgtaaaaaacccaaacccacgaaag
aggaggaagcagagcctgaagatgggccacggagggacgctggacagtgctgccagtggg
gtgttggttgttggtgttgggaatggcacaaagatgctcagtacaatgttggctggttct
aagaaatatgttgctgttggggaactggggaaagcaacagatagtcttgatgccactggc
agtgtgattctggagaaagactttgaacacataaccaggttggacattgaggagaaactg
aaagctttcactggtgacataatgcaagttcctccactctactctgcgctgaaaaaggac
ggccagcgcctgtctgtcctgctgaagaaaggtcaccaggttgaggccaaaccagccaga
ccggtcaccgtgtacaacctgaccctgcaggagttcaagcctcctctcttcactcttgat
atcgagtgcggtggcggattttatgtcagaagcttggttgatgacctgggaaaggcgctg
tcatcatgtgcccatgtgaaggacctgatccggaccaagcagggtcagttcacccttgag
gagcacgccctaccagaggagcagtggacactggaacacatcctgcgctctctgcagccc
tgctccgacgcggagctcccgggcgccgacacctga
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