Etheostoma cragini (Arkansas darter): 117936817
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Entry
117936817 CDS
T07493
Name
(RefSeq) integrin beta-3-like
KO
K06493
integrin beta 3
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra03266
Virion - Herpesvirus
ecra04081
Hormone signaling
ecra04145
Phagosome
ecra04148
Efferocytosis
ecra04510
Focal adhesion
ecra04512
ECM-receptor interaction
ecra04517
IgSF CAM signaling
ecra04518
Integrin signaling
ecra04810
Regulation of actin cytoskeleton
ecra04820
Cytoskeleton in muscle cells
ecra05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
117936817
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
117936817
04512 ECM-receptor interaction
117936817
04517 IgSF CAM signaling
117936817
04518 Integrin signaling
117936817
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
117936817
04148 Efferocytosis
117936817
09144 Cellular community - eukaryotes
04510 Focal adhesion
117936817
09142 Cell motility
04820 Cytoskeleton in muscle cells
117936817
04810 Regulation of actin cytoskeleton
117936817
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
117936817
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ecra04131
]
117936817
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ecra04147
]
117936817
04515 Cell adhesion molecules [BR:
ecra04515
]
117936817
04090 CD molecules [BR:
ecra04090
]
117936817
Membrane trafficking [BR:
ecra04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
117936817
Exosome [BR:
ecra04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
117936817
Cell adhesion molecules [BR:
ecra04515
]
Integrins
Integrin beta subunits
117936817
CD molecules [BR:
ecra04090
]
Proteins
117936817
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_b_cyt
Integrin_B_tail
PSI_integrin
I-EGF_1
EGF_integrin
EGF_2
EGF_TEN
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
117936817
NCBI-ProteinID:
XP_034716108
LinkDB
All DBs
Position
21:complement(8750966..8767490)
Genome browser
AA seq
829 aa
AA seq
DB search
MSLVDVKSFFSFFSACTSSRARWQAPSSQRARTRMGALPAQRLLWMCVFIFTGITAVYGS
NVCTSRGASTCKQCLAVHPSCAWCFQEDFGQGVASSSRCDLKSNLMAAGCALSALEFPTS
KLQVIEDRPLSNKAAGATQDVTQINPQKLHITLRPDDAKRFTVKVRQVEDYPVDLYYLMD
LSYSMNDDLFRLRTLGKGLAEAMNRTTSNLRMGFGAFVDKPLSPYMYISPKEAVKNPCYS
INTTCLPQFGYKHVLSLTEEVGRFTEEVKKQMVSRNRDAPEGGFDAIIQAAVCKEQIGWR
PGASHLLIFTSDAKTHVALDGRLAGIVQPNDGQCHLNSDKMYSMSTTMDYPSLALITEKM
SENNINLIFAVTNPVVPLYQNYSELIPGTTVGTLSNDSGNVIQLILKAYAKIRSKVELEL
QGVPEELSLSFNATCLNGELIPGLKSCSGLKIGDTVSFSVEARARGCPKQKKKTFIIKPV
GFKDSLSITVNFECDCKCQNKAHPNSPKCNQGNGTYECGICLCHPGRLGPHCECAEGDYN
PTEQDRCSGPAGSGGPQSAICSGRGDCVCGQCVCHSSDFGKVWGKLCECDDFNCLRYKGE
LCSGHGVCNCGFCQCAPDWQGENCNCSRRTDTCMSNLGLLCSGRGQCVCGACECTQPGAY
GATCDKCPTCPDACTMKKECVECKHFKRGKLFEDNTCSRICKDEIILVDEIVLHDTNAVN
CTYKDEDDCVERFQYYEDASGKSILFVVKEPDCPKGPDILVVLLSVAGAILFLGLAALLI
WKLLVTIHDRREFAKFEEERAHAKWDTGHNPLYKGATSTFTNITYRGKD
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcttgttgatgtaaaaagttttttctcgttcttctctgcttgcacttccagcaga
gctcgttggcaggctccgtcctcacagagagcccgcaccaggatgggtgctctcccggcg
caaaggctattatggatgtgtgttttcattttcactggaattacagccgtttacggttca
aacgtctgcacctccagaggggccagtacatgcaagcaatgtctggctgtgcaccccagc
tgtgcatggtgcttccaggaggactttggccagggggttgccagttcttctcgctgtgat
ttgaagagtaatctgatggcagcaggttgtgctctatcagctctggagtttccaaccagc
aaactgcaagtgatcgaggaccggcccctcagcaacaaggctgcgggggccacgcaagac
gtcacccagataaatccccagaaactacacatcaccctgaggccagatgatgctaagcgt
ttcacagtgaaagtgcgtcaggtagaggactaccctgtggatctctactacctcatggat
ctctcctactccatgaacgatgacctctttcgcctgaggacgctgggcaagggcctggcc
gaggccatgaaccgcaccaccagcaacctccgtatgggcttcggggcttttgtggacaaa
ccgctctcgccctacatgtacatctcccccaaagaagctgttaaaaacccctgctatagc
attaacaccacctgtctgccccagtttggctacaaacacgttctgtccctgacggaggag
gtgggccgcttcacagaggaagtgaagaagcagatggtgtccaggaaccgcgatgcccca
gagggaggctttgatgccatcatccaggctgctgtgtgcaaggagcagattggctggcgc
cctggtgcatcccacctgctgatcttcacctcggacgccaagactcacgtggctcttgat
ggtcgtctggctggaattgtgcagcccaacgacgggcagtgccacctcaactctgacaaa
atgtacagcatgtctaccaccatggattacccatctctagctctgatcacagagaagatg
tcggagaacaacattaatctcatttttgctgtcaccaatcctgtggttcctctgtaccag
aactacagtgagctgattcctggaaccacagtaggaacgctgtccaacgactcgggcaat
gttattcagctcatactgaaggcctacgctaaaatccgttccaaggtggagctggagctt
caaggcgtcccagaggagctgtctctgtccttcaacgccacatgtctgaatggagagctt
atccctggcctcaaatcctgctctgggctcaagataggagacacggtttctttcagtgta
gaggccagagctcgaggttgccccaaacagaagaagaaaaccttcatcattaagcctgtg
ggcttcaaggactccctctctatcactgtcaatttcgagtgtgactgcaagtgccagaac
aaggcccatcccaatagccccaaatgtaaccaaggcaacggcacatatgagtgtggcatt
tgcctgtgccatccgggtcgcttagggccgcactgcgagtgtgcagagggagactataac
cccacagagcaggaccgctgcagcggacctgcaggctctggaggacctcagtccgccatc
tgcagcggccgtggggactgtgtgtgtggccagtgtgtgtgccacagcagtgactttgga
aaagtctggggaaagctgtgtgaatgtgatgacttcaactgcctgcgctacaaaggggaa
ctgtgctcaggccacggcgtctgtaactgtggtttctgccagtgcgcaccagactggcag
ggtgagaactgtaactgctccagacgtactgacacctgcatgtcaaacctgggcttgtta
tgcagcgggaggggccaatgtgtgtgtggggcctgtgagtgcacccagcctggggcctac
ggagcaacatgtgacaagtgccccacctgccctgacgcctgcactatgaagaaggagtgt
gtcgagtgtaagcatttcaagaggggaaaactgtttgaggacaacacctgctctcgaatc
tgcaaggatgagattattcttgtggatgaaatagtgcttcatgacacaaatgctgtgaac
tgcacttacaaagatgaagatgattgtgtggagcgtttccagtactatgaggatgccagt
ggaaagtccatcttgtttgttgtcaaagagccagactgtcccaagggtccagacatttta
gtggtgcttctgtcggtggcgggagccatcttgttcctcggtttggcggctttgcttatc
tggaaacttctggtcactattcacgacagacgggagtttgccaaatttgaggaagaacgc
gctcatgccaagtgggacacgggacacaatcctctctacaaaggagccacatctaccttc
acgaacattacatacagaggaaaagactga
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