Etheostoma cragini (Arkansas darter): 117936835
Help
Entry
117936835 CDS
T07493
Name
(RefSeq) thrombospondin-2-like
KO
K04659
thrombospondin 2/3/4/5
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04145
Phagosome
ecra04510
Focal adhesion
ecra04512
ECM-receptor interaction
ecra04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
117936835
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
117936835
09144 Cellular community - eukaryotes
04510 Focal adhesion
117936835
09142 Cell motility
04820 Cytoskeleton in muscle cells
117936835
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ecra04131
]
117936835
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ecra04147
]
117936835
00536 Glycosaminoglycan binding proteins [BR:
ecra00536
]
117936835
Membrane trafficking [BR:
ecra04131
]
Endocytosis
Phagocytosis
Opsonins
117936835
Exosome [BR:
ecra04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
117936835
Exosomal proteins of colorectal cancer cells
117936835
Exosomal proteins of bladder cancer cells
117936835
Glycosaminoglycan binding proteins [BR:
ecra00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
117936835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_C
TSP_3
TSP_1
TSP1_spondin
EGF_3
TSP1_CCN
TSP1_ADAMTS
TSP1_CFP_C
EGF
Motif
Other DBs
NCBI-GeneID:
117936835
NCBI-ProteinID:
XP_034716145
LinkDB
All DBs
Position
21:5876198..5884468
Genome browser
AA seq
796 aa
AA seq
DB search
MCVYVYKDNEDGWSPWSEWTHCSVSCGRGGQQRGRSCNGIMPSCAGPSVQTRSCMLMKCD
HKVHPGGKWGLWSPWSGCTTTCGEGNITRVRLCNKPPAQKGDRGCTGSARETQSCNNTLC
PIAGGWTSWTEWSPCSESCGGGLKSRQRECSNPAPQHGGKPCAGDTVDYEACNKQPCPID
TCLLSNPCFPGVVCTSHSDGSWECGHCPLGLNGNGTHCEDENECEVENVCVTECVNTDPG
FYCLPCPPRYKGTQPYGLGLEIAQKTRQVCEPYNPCKDNTHNCHKYAECRYLGLASEVLY
KCVCAVGFAGDGFLCGEDSDLDGWPNSKLTCKQNATYHCQKDNCPMLPNSGQEDLDKDGQ
GDACDPDDDNDDIIDERDNCPLVYNPRQFDSDRDGVGDRCDNCPFDSNPLQTDTDDNGEG
DACSIDIDGDEVLNDRDNCPLVYNTDQRDTDMDGVGDQCDNCPLLHNPLQLDSDNDLVGD
MCDDNDDIDEDGHQNSLDNCPYIANSNQADHDKDGKGDACDHDDDNDGIPDDRDNCRLVP
NRDQLDSDGDGSGDACFDDFDNDSIPDALDPCPLNQDIGSTDFRKFQVVLLDPKGTTQSD
PLWVIRSQGTELLQTANSDPGIALGYDKFSAVDFSVTFYVNTNRDDDYAGIVFAYQSSRR
FYVVMWKQVSQAYWEKKPFKAFATAGVSIKLVNSTTGPGEYLRNALWHTGNNRHQVKTLW
HDPNKIGWKAYTAYRIHLIHRPKTGFIRVVVYEGREILSDSGAVYEHTLAGGRLGLFVFS
QEHVLFSDLRYECRDN
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgtgtatgtatataaagataatgaagatggctggtccccctggtctgagtggacc
cactgttcggtctcctgtggacgtggagggcagcaaaggggtcgctcctgcaatggcatc
atgccatcctgtgccggcccgtcagtccaaactcgcagctgcatgctgatgaagtgtgac
cacaaggtgcatcctggcgggaagtggggcctttggtctccttggtctgggtgtacaacc
acatgtggagaaggcaacatcacacgggttcgtctctgcaacaaacctccagcgcagaag
ggagacagagggtgcacgggcagcgccagggagacacaatcttgcaacaatacactttgc
cccattgctggaggctggacaagctggacggaatggtctccgtgctcagagtcatgtggt
ggaggtcttaagagtcgccagcgggagtgttcgaaccccgcccctcagcacggtgggaag
ccttgtgccggagacactgtggactatgaagcatgtaacaaacagccatgtcctatagat
acatgtttgctttccaatccatgttttcctggagtagtgtgcacatcacatagcgatgga
tcatgggagtgtggacactgtccgttgggtttaaatggcaatggcactcactgtgaagat
gagaacgagtgtgaagtggagaatgtgtgtgtcacagagtgtgtaaatacagaccctggc
ttctactgcctgccctgtcctcctcgctacaaaggcacccagccgtacggccttggactg
gagatagcccagaaaaccaggcaggtgtgtgaaccatacaatccttgcaaagacaacaca
cacaactgccacaagtatgctgagtgtaggtaccttggcctggcgtctgaggttttgtac
aagtgtgtgtgcgctgttgggtttgcgggcgacggcttcctgtgtggtgaagactctgat
ctggatggatggcccaacagcaaattaacctgcaagcagaatgcaacctatcactgtcaa
aaggataactgccctatgctaccaaactctggacaggaagacctggacaaagacggacag
ggagatgcctgtgatcctgatgatgacaatgatgacatcatagatgagagggacaactgc
ccgctggtgtacaaccctcggcagtttgactctgacagagacggggtcggggaccgctgt
gacaactgtccatttgatagcaacccgctgcagactgacactgatgacaatggagaagga
gacgcctgcagcattgacattgatggagatgaggttttgaatgatcgtgacaactgtccc
ttagtctacaacactgaccagagggacacagacatggatggtgttggagaccagtgtgac
aactgtccccttctacacaacccactgcagcttgactctgacaatgacctggtgggggac
atgtgcgacgacaacgacgacatcgatgaggacggccaccaaaactctcttgacaactgc
ccctacattgccaatagtaaccaggccgaccatgacaaggacgggaagggtgacgcatgt
gaccatgacgacgacaacgatggtatccctgacgaccgggacaactgtagactagtgccc
aacagggaccagctggactctgatggtgatgggagcggagatgcatgctttgatgacttt
gacaatgacagtattccagatgcgctggatccatgtccactgaaccaggatatcggatct
acagacttcaggaagtttcaggttgttttgttggaccctaaaggcaccacgcagtcggac
cccctctgggtgatccgcagccaaggcacggagctgctgcagacggccaactcagacccc
ggcatcgctttaggatatgacaagttcagcgcggtggacttcagcgtgacattttatgtg
aataccaaccgagatgacgactacgcaggcatcgttttcgcctaccaatccagtcgacgc
ttctatgttgtcatgtggaaacaggtgtctcaggcctactgggagaaaaagccatttaaa
gcttttgccacagccggagtctcgattaaactagtcaactccaccacaggaccaggagag
tatctacgcaatgccctgtggcacaccggaaacaacagacaccaggtgaaaacattgtgg
catgaccccaataaaattggctggaaggcctacacagcctaccgcatacaccttatccac
agacccaagactgggttcatcagggtggtggtgtacgagggcagggagattttatctgac
tctggggcggtgtatgaacacaccctggctgggggcagactggggctgtttgtcttttct
caggaacatgtcctcttctcagacctcagatatgagtgcagagataattga
DBGET
integrated database retrieval system
