Etheostoma cragini (Arkansas darter): 117936881
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Entry
117936881 CDS
T07493
Name
(RefSeq) RNA-binding protein with serine-rich domain 1-like isoform X1
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra03013
Nucleocytoplasmic transport
ecra03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117936881
03015 mRNA surveillance pathway
117936881
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecra03019
]
117936881
Messenger RNA biogenesis [BR:
ecra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
117936881
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_7
RRM_occluded
RRM_5
Nup35_RRM_2
RBD_AKAP-17A
RAP1
Motif
Other DBs
NCBI-GeneID:
117936881
NCBI-ProteinID:
XP_034716245
LinkDB
All DBs
Position
21:complement(20549833..20555261)
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AA seq
283 aa
AA seq
DB search
MRLSLSRVGGTMAPSPTKRKEDDKSKQRVKEKPGATKEGADKDRGREKKRTRRSASSQSS
RSSSSSSSGSSSGSSSGSSSSASSHSGSSSPRSSSSSSSSSPSPSRQRHNNRRRSRSKSK
SAKKDDRDRRRRSPTPKPTKVYLGRLTRNVIKEHIQEIFSTYGKIKMIDMPVNRVHPNLS
KGYAYVEFETPEEAEKALKHMDGGQIDGQEITVTAVLAPTVRPPPRRLSPPRRMPPPPPM
WRRTPPRMRRRSRSPRRRSPVRHRSRSPGRRRHRSRSSSNSSR
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atgcgactgtcactgtcgcgagtaggtggaacgatggcgccttccccaacgaagagaaag
gaggacgataagagtaaacagcgagttaaggagaagccaggagctacgaaagaaggagct
gacaaagaccggggccgagagaagaaacgcacccggcgcagcgcgtccagccagagcagc
aggtccagctccagcagcagctccggctccagctccggctcgtccagcggctccagctcc
tcggcctccagccactcgggctcgtccagcccccgctcctcttcctcctcctcgtcctcc
tcaccaagcccgagccgccagcggcacaacaacagacgacgctcacgctccaagtcaaaa
tcagcaaagaaggatgaccgggaccgacggcgtaggagccccacacccaaacccaccaag
gtctacctgggccggctgaccagaaatgttatcaaggaacacatccaggagatcttctcc
acttatggcaagattaagatgattgacatgccggtgaaccgcgtgcacccgaacctgtcc
aagggctacgcctacgtggagtttgagacacccgaggaggcggagaaagccctgaaacac
atggacggaggtcagatcgatggtcaggagatcacagtcacagctgtgctggctcccacg
gtgcgccctcccccccgccggctgtcccctccccgcaggatgcctccccctcccccaatg
tggcgacgcactcccccacgaatgaggagaaggtctcggtctccacgacggcgctctcca
gtgcgccacaggtctcgatcccctggccgccgccggcatcggtcacgctctagttccaac
tcctcccgctag
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