Etheostoma cragini (Arkansas darter): 117936934
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Entry
117936934 CDS
T07493
Symbol
nlrc3
Name
(RefSeq) NLR family CARD domain-containing protein 3 isoform X1
KO
K22614
NLR family CARD domain-containing protein 3
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
ecra04054
]
117936934 (nlrc3)
Pattern recognition receptors [BR:
ecra04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
117936934 (nlrc3)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_6
NACHT
NLRC4_HD2
NOD2_WH
CARD
Ferritin_2
AAA_16
LRR_12
Motif
Other DBs
NCBI-GeneID:
117936934
NCBI-ProteinID:
XP_034716337
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All DBs
Position
21:11931441..11944579
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AA seq
1134 aa
AA seq
DB search
MERKAHYDSILDRSKRIMWQDDCYVDLQSTSSSVSSQAGTEDLGWIQKHQDQLQRFITSS
FLEGMLTHLRKVDVLSSADEIKVKEAGRLRDQVNMLTSIVTDKDTQGSDALRGFIESSDS
QVAQLIINHDSMGKEHKEVLLRQYEQYRDRDSVSCTKLNIFSRTLLLVDGLSDIQQKEHD
LMQVGATRGRKRNHLRQLGLTKLLEPLTRVSLPPRVSLTLGVAGIGKTTWVRHFIRQWSQ
GAICTDVSFVLPFTFCELNSLEKVSAERLVKMAFPHLTDPSLVLSSSCRTLLILDGLDEF
RCTLNFSDAAPCSNPKKEVAIDDLVTNIIRGNLLPNVAVWVTSRPGVASFIPGGLVDRVT
EIPGFSPKDIQLFLNHHFSERGFASKIWAHLESHKILMVMCYIPCICWIVADTLIYIMQS
ETQESLPKTCTELYAHFCSMKAEVGEPRGREPVKMEQLHGSNRKLLGNLGRLAFYGLLKR
KYTFSEQDLRAYGIDLLLTQCSLGAGVLVREESAIYTTYRFTHLSLLEFLAATFYHISSK
RAIFDLFSESTMSWPKIGFQNHFRSAFQHSQQAEDGHLDVFVRFLTGLLCPMAQKPLAGL
LALGKDDGNQKAWAAGFLQGLLVSGGAVVSLRAVNLAYCLHELQHTELLRSVEEDLQLGS
LAGKLTRAHCVVLGYLLHVSPECSEQTNLTGSLNYTTVKCLLPQLLYCSCLRLENNQFKD
DVMELLGSLLSAKDCHIQKISLAENAISNKGSKALSRALLVNRTLTSLNLRNNNIGSKGA
KFLAEALKMNQVLVSINFQNNSIEEEGAQALAEVLHCNRKLVSLNIRKNKIGAGGAKRIA
EALKTNQTLTKLILCSNQLGDKGAIALAEALTVNHTLLSLQLQSNSISNRGMTALTKALR
LNHGLVSLNLRENSIGVEGAKNMAHALHENNSLQDLDLTANLLHDEGVQAIAGAIKFNRG
LTSLHLQWNFIKSSATKALAHALLSNATMQLLDLQENAIGNEGVIFLAEALKTNVSLRTL
CLQGVSSSTSGAIAMAEALMTNQTLQTLDLRGNTVGMEGAKALANALKSNRSLKSLNLQE
NSLGMDGAIFIATALKGNHQLTYINLQGNGIGESGAKVISDAIRADAPGCVVDI
NT seq
3405 nt
NT seq
+upstream
nt +downstream
nt
atggagaggaaggcccattacgattctatcctggaccgaagcaaacgcatcatgtggcag
gacgactgctatgtggatctacagtctacatccagttctgtctcttcgcaagctggaaca
gaagaccttggctggatccaaaagcatcaagaccagctgcagcgcttcattacttcctcc
ttcctggagggtatgttaacccacctgagaaaggtagatgtgctgagttcagctgatgag
atcaaggtcaaagaagcgggccggctgcgtgaccaggttaatatgctcacaagtattgtc
actgacaaggacactcaaggttctgatgctctccggggcttcatagagagctcagattct
caggtggcccagctcatcatcaatcacgattccatggggaaggagcacaaagaggtgctg
ttacggcaatatgagcagtacagagacagagattcagtcagctgcaccaaactaaacatc
ttctcaagaaccttactactggttgatggactttccgacatccagcaaaaggaacatgac
ttaatgcaggtgggggcaactcgaggaaggaaaagaaatcatctcagacagctggggctg
accaaactcttggagcccctgacccgggtcagtttacctccccgggtctccctaacactc
ggggtggctggtatcggcaagacaacctgggtccgacacttcatcagacagtggagccaa
ggggccatctgtacagatgtgagcttcgtcctgcctttcactttttgcgagctgaactca
ctggagaaagtctctgctgagaggctggtgaaaatggcttttcctcatttaacagacccc
agtctggtcctgagcagctcctgccgcacactgctcatacttgatggtttggacgaattc
cgctgcactttaaatttctctgatgcagctccttgcagcaacccaaagaaagaagtggca
attgatgacctagttactaacatcatccgggggaatctgctacctaacgtggccgtgtgg
gtgacctccaggccaggagtggcctcattcatccctggaggattggtagacagggtgact
gagatcccaggattcagcccgaaggacatccagctcttccttaaccaccacttctctgag
aggggttttgccagtaaaatatgggcgcacttggagtcccataagatcttaatggtgatg
tgctacataccatgcatttgctggatagtagctgatactctgatctatatcatgcagagt
gaaactcaagagagccttccaaagacttgtaccgagctatacgctcacttttgttccatg
aaggcagaagtaggtgaaccaagaggcagggagcctgtgaaaatggaacagcttcatggg
agcaatcgtaaactgctggggaaccttggacgactggcgttttatgggctcctcaaacgc
aagtacaccttcagcgagcaagacctcagggcctatgggatagatctactgttaactcag
tgcagtcttggtgctggagttcttgttcgggaggagtctgccatatacacaacataccgg
ttcactcatttgtctttgctagagtttcttgcagctactttttaccatatctcctccaag
cgggccatctttgacttattctcagagagcaccatgtcttggcccaagatcggtttccaa
aaccactttagaagcgcctttcaacactcacaacaagctgaagacggtcacttggatgtg
tttgtacgcttcctgacaggcctgctgtgcccaatggcacagaaacctctggctgggctt
ctggccctcggaaaagatgatggcaatcagaaggcttgggcagcagggtttttacaaggc
ctcttggtcagcggaggtgcagtggtgtccctgcgtgccgttaacctggcttattgttta
catgagctgcaacacacagagctattgcggagtgttgaggaagatttacagcttggtagc
ctagcagggaaattaacacgagctcactgtgttgtgctgggctacctccttcatgtgtct
ccagagtgcagtgaacagaccaacctaacaggctccctgaactacacaacagtgaaatgt
ctgctcccacagctgctgtactgcagctgtctcaggttagagaataatcaattcaaagat
gatgtcatggagttgctgggaagccttctgagcgccaaagactgccatatccagaagata
agtttggcagagaatgccatcagcaacaaaggatccaaagccctgagtcgagccctcttg
gtgaaccggacgctaacatctctcaatctccggaacaacaacattggctctaaaggtgca
aagttcctggcagaggctctgaaaatgaaccaagtcctggtatcaatcaacttccagaac
aactcaattgaggaggaaggtgctcaggccctcgcagaagtactgcactgcaaccgcaaa
ctggtgtctctgaacataaggaagaataagattggagcgggaggagccaaaaggattgca
gaggcgctgaagacaaaccagactctcacaaagctgattctttgtagcaaccagctgggg
gacaaaggggcgatcgctctggcagaggctttgacagtcaaccacacgctcctctctctt
caacttcagagtaactcaatcagcaacagggggatgacagccttaaccaaagcactcagg
ctcaaccatggccttgtctccttgaatttaagggagaactccataggggtggagggagct
aagaacatggctcatgccctccatgagaacaactctctgcaggaccttgacctcacagcc
aacctgttgcacgatgaaggggttcaagctatagcaggcgcaatcaagtttaatcgcggc
ctcacctctctgcatctccagtggaatttcatcaagtcctctgccaccaaagctctggcc
catgcactcctctccaatgccacaatgcagctcttggatctacaggagaatgctattggg
aatgaaggcgtcatttttcttgccgaagccctgaaaaccaacgtgtctctgcgtacatta
tgcctccagggagtgtcatcaagcaccagtggtgccattgcaatggcagaggctctaatg
accaaccaaaccctgcaaacattagatctacgtgggaacaccgtggggatggaaggagca
aaggctctggctaacgcactcaaaagcaacagaagcctcaagtcgttgaatctgcaggag
aactctctggggatggatggagccatatttattgcaacggccttgaagggaaaccaccaa
ttgacgtacatcaatttgcagggaaatggcattggagaatccggagctaaggtcatatct
gatgctataagagctgacgctccgggctgtgtggtggacatctga
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