Etheostoma cragini (Arkansas darter): 117936946
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Entry
117936946 CDS
T07493
Symbol
sec31b
Name
(RefSeq) protein transport protein Sec31A isoform X1
KO
K14005
protein transport protein SEC31
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
117936946 (sec31b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ecra04131
]
117936946 (sec31b)
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
ecra02044
]
117936946 (sec31b)
Membrane trafficking [BR:
ecra04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
117936946 (sec31b)
Secretion system [BR:
ecra02044
]
Sec (secretion) system
Eukaryotic Sec-SRP protein
117936946 (sec31b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_RIG_2nd
WD40_Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
WD40
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_EML
WDR55
TPR_Sec16
EIF3I
Beta-prop_EIPR1
Beta-prop_WDR35_TULP_N
WD40_MABP1-WDR62_2nd
WD40_RFWD3
Beta-prop_WDR90_POC16_2nd
Beta-prop_HPS5
SRA1
Beta-prop_DCAF4
Prp18
MukF_M
Beta-prop_DCAF12
SMAP
Motif
Other DBs
NCBI-GeneID:
117936946
NCBI-ProteinID:
XP_034716371
LinkDB
All DBs
Position
21:6965766..6981042
Genome browser
AA seq
1223 aa
AA seq
DB search
MRLKEIQRTAHQAWSPVGHHPIHLALGTSAQQLDASFNTTAAIEIFEVDFSDPSLEMQLK
GSLPTSNRLHSIVWVNFGMGADGTGGRLVGGSENGTITVYNPEVIMSSGADAVVGQSDKH
TGPIRALDFNPFQSNLLASGANDSEIYIWDLNNFSSPMTPGAKSQPAEDVSVVSWNRQVQ
HILASANPSGKAVVWDLRKNEPIIKISDHSNRMHCSGMLWHPDVATQLVLGSEDDRLPVI
QMWDLRFATSPLKVFENHTRGILSISWSQADSELLLSSAKDNRILCWNPNTGEVIYELPT
TNQWCFDVQWCPRNPALLSAASFDGRITVYSVMGGSLKAQQQSTANMISSSFDSMDPFGT
GQVLPPLQVPQPTVQDTIVPPLKKPPKWVRRPVGASFAFGGKLITFDNPLLPPVQSPQPV
PRQVFVSQVTTETEFLQRSRELQAALQSGSFNNYCQAKIHNAKSDAEKDIWKFLLVNFED
EARVKFLRLLGFSKDELEIKISKCLGKSLQHNGHGVDAKDLAEKMQQLSTERSDVATAVC
DARTSGSVSPADFFSQTPKENSNFQIPVSCDTNGLISQALLVGNFEGAVDLCLSDGRYAE
AILLSVSGGEELLKKTQQKYLSNQKNSISMLISSVVTQNWRDIVQSCELDNWKEALAALL
TYAHPEDFARLCDTLGGRLEHERTEKRCLQACLCYICSGNIEKLVECWALHRDCSSPLGL
EDLVEKVMMLRKSIERLRNSEVAVQSPILAEKLTCYAGILAAEGSLATAMAYLPENSEQT
GITMLRDRLFHAQEEAAVGQQPSNSFNRGNVSTAKPTPAAQASAPKAQTVSPYQPSAPFH
GAQQQPPMPSFFTPQAPANTGPAQPPPSHVLPSSATSPALRPPYPQHKAAAPGFLAHQSF
QPQPQPIGGPSSFPPPGPSMPAANLSGPPLLSPTSTPTGLPPMPSPGVPPTSFLPSTSFA
SGPMPPSSQPGAPVPMYPGGLHNQGPATPMASGPYVPLGSGYPQGGPGAPAVKPFSAPPV
APPPTGFFPWLNSQSDIQGPHEGWNDPPAVRGGPRKKKVPDNYTPPAPITAPVMGFPVEA
PQPHNHTQVPPGAPQEPSVQQLQQLPAERVEQKEIPAEHMVLKSTFDSLVQRCQLAAGDP
QTKRKLDDAVKRLAYLYDKLREQSLSHNILNGLHEISRCVASQNYQRGLEVHTQVVSSSN
FSEISAFMPVLKMLMTIANKLGV
NT seq
3672 nt
NT seq
+upstream
nt +downstream
nt
atgaggctgaaggagatccagaggactgcccaccaggcatggagtcctgtcggacaccat
cctatccacctggccttaggaacatcagcacaacagcttgatgcctccttcaacaccaca
gctgccatagagatatttgaggtggatttctctgacccatctctagagatgcagctcaaa
gggtcgttgcccacctcaaacaggttgcacagtattgtttgggtgaattttggaatggga
gcagatggtactggagggagactggttggtggcagtgaaaatggcaccataactgtatac
aacccagaggtcataatgagctccggtgcagacgcagtagtgggacagtctgacaaacac
acaggacccatccgagcactcgatttcaacccttttcagagtaatctcctcgcttcagga
gcaaatgattcagagatatatatctgggatctgaacaactttagcagtccaatgacacca
ggagcaaagtcacagcctgctgaagacgtcagtgttgtgtcctggaacaggcaggttcag
catatcctagcctctgctaaccccagtgggaaagcagttgtgtgggatctgagaaagaac
gagcccatcatcaagatcagtgaccacagcaacaggatgcactgttcaggaatgctctgg
caccctgatgtggccactcaattggtgttgggctctgaagatgaccgactgccggtcatc
cagatgtgggacctccgttttgccacgtcaccccttaaagtctttgagaaccatacaagg
gggattctatccatatcctggagccaggctgactctgagctcctactgagtagtgctaaa
gataacaggatcctctgctggaatccaaacactggagaggtgatttatgagcttccgaca
accaaccagtggtgtttcgatgtccagtggtgccccaggaatccagccctgctctcagct
gcctcatttgatgggagaatcactgtctactctgttatgggagggagcttaaaggctcag
cagcaaagcacagccaacatgatatcgtcctcatttgattcaatggatccctttggtaca
gggcaggtgctgcctcccctccaagttcctcagcctacagtccaggacaccatagttccc
cctcttaagaagccaccgaagtgggtgcgcaggccagtgggggcttcatttgcttttggt
ggaaagctgataacctttgacaatcccctgctgcctccggtgcagagcccccagcctgtc
cccagacaagtgtttgtgagccaggttaccacggagacagagttcctccagcgctccagg
gagctgcaggcagcgctgcagtcgggctccttcaacaactactgccaggccaaaattcat
aatgctaagtccgacgctgagaaggacatatggaagttcctcctggtaaactttgaggat
gaagcccgcgttaaattcctccgacttttgggttttagtaaagatgaattggagataaag
atttctaaatgcctggggaagagtcttcagcacaatggacacggtgtagatgccaaagat
ttggcagaaaagatgcagcagctctccaccgagaggtctgatgtagcaactgcagtatgt
gatgctagaacttctggttctgtttcaccggcagacttctttagccagacaccaaaggag
aactccaacttccagattcctgtatcatgtgatactaatggtttaataagccaggcgctg
ctggttggtaactttgagggagctgtggatctgtgtctgagtgatggccgttacgctgaa
gccattctgttgtctgtcagtggaggagaggagctgctcaagaaaactcagcaaaaatac
ctaagcaatcaaaagaacagcatttcaatgctcatatcctcagtggtgacccagaactgg
agagacatagtgcaaagctgtgagttggacaattggaaggaggctctcgctgctctgctg
acttatgctcaccctgaagattttgcccgcctgtgcgataccctgggaggccggttggag
catgaaaggacagagaagcgctgcctgcaggcctgtctgtgttacatctgctctgggaac
attgagaagctagtggagtgctgggccttgcatagagactgctcctctcctcttggtcta
gaggatctggttgaaaaagtaatgatgctgcgtaagtcaatcgaacgcctccgcaacagc
gaggtggctgtccagagccccatcctggccgagaagctaacctgctatgctggcatactg
gcggctgagggcagtctggccactgccatggcctacctgcctgagaactcagagcaaact
gggatcacaatgctgagagacaggttgttccatgctcaggaagaggctgccgttggacag
cagccttcaaactccttcaacagagggaatgtgtccacagctaagcccactcctgctgct
caagcttctgcaccaaaagcacaaactgtgagtccttaccagccctctgctcctttccac
ggtgcccaacagcagcctcctatgccgtcgttttttaccccacaagctccagccaacacc
ggacctgctcagccgccgccttctcatgtactgccgtccagcgcaactagccctgccttg
aggcctccctacccccaacataaggctgcggctccaggtttccttgctcatcagtcattc
cagcctcagcctcagcccattggcggaccctcaagcttccctcctccaggtccttctatg
ccagctgctaacttatcaggacccccactactgtctccgacatcgactcccacgggcctg
ccccccatgcccagccccggggtgccaccgacaagcttcctgccgtctacctcttttgct
tcaggccccatgccacccagctcccaacccggagccccagttcccatgtaccctggtggc
ctgcacaaccaggggcctgcaacccccatggcatctggtccctatgtccctcttggatca
ggttacccacagggaggccccggagcacctgcggtaaagcccttctcagccccacctgtg
gccccacctcctacagggttctttccctggcttaattcccagtctgacattcaaggacct
catgaaggctggaatgacccaccagcagtacgaggtggacctaggaaaaagaaggtccct
gataattacactccaccagcccccatcactgcccctgtgatgggattccctgtggaggcc
cctcagccccataaccacacccaggtcccccccggagccccacaggagcccagtgtgcag
caactccagcagctgccagcggagagggtggagcagaaagaaatccccgctgaacacatg
gttctcaaatccacctttgacagcctggtgcagcgctgccagctcgccgccggagacccg
caaaccaaaaggaaactcgatgatgcagtcaaacgtttggcatacctgtacgacaagctg
agagagcagtcgctctctcacaacatcctgaacgggctccatgagatcagccgctgtgtg
gcgagccagaactaccagcggggtctggaggtccacacccaggtggtcagcagcagcaac
ttcagcgagatttccgcctttatgcccgtcctcaaaatgctcatgaccatcgccaacaag
ctgggcgtctaa
DBGET
integrated database retrieval system
