Etheostoma cragini (Arkansas darter): 117936984
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Entry
117936984 CDS
T07493
Symbol
lrrc4bb
Name
(RefSeq) leucine-rich repeat-containing protein 4B
KO
K16360
netrin-G3 ligand
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
117936984 (lrrc4bb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ecra04515
]
117936984 (lrrc4bb)
Cell adhesion molecules [BR:
ecra04515
]
Immunoglobulin superfamily
NGL family
117936984 (lrrc4bb)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_1
LRR_9
ig
LRR_14
V-set
Ig_2
LRRNT
Ig_6
DUF7617
LRR_NXF1-5
Big_6
Motif
Other DBs
NCBI-GeneID:
117936984
NCBI-ProteinID:
XP_034716464
LinkDB
All DBs
Position
21:complement(11220639..11229936)
Genome browser
AA seq
745 aa
AA seq
DB search
MRVVMVTNPCTPSPLLWLVQLLLWFHNHGPQLTEAAPPCPNPCTCSNQASRVICTRKSLD
QVPDSISENTRYLNLQENTIQVIKSDTFKHLRHLEILQLSKNHIRQIEVGAFNGLPNLNT
LELFDNRLTVVPSQAFEYLSKLRELWLRNNPIETLPAFAFHRVPSLRRLDLGELRKLDFI
SEAAFEGLVNLRFLNLGMCGLKDIPNLTPLVRLEELELSGNQLGLVRPGSFQGLVSLRKL
WLMHSRVSVIERNAFDDLKNLEELNLSHNSLHSLPHDLFTPLHQLERVHLNHNPWVCNCD
VLWLSWWLKETVPSNTTCCARCHAPPAIKGKYIGELDQSHFTCFAPVIVEPPTDLNVTEG
MVAELKCRTGTSMTSVNWFTPNGTLMTHGSYRVRISVLHDGTLNFTNVTVQDTGQYTCMV
TNSAGNTTATAVLNVSASDPSNSYSYFTTVTVETVETVRGDEENSARQYINETFIDFPNP
TVQRGVLEGRPGITISPSLSSLSSLSPRANRATENAVTVSIMDVTNIPGLDDVMKTTKII
IGCFVAITFMAAVMLVVFYKLRKQHQLHKHHGPARAIEIVNVEDEIGAGAGSGISGGSTM
NSGSGEGTLRIHHPEIVNLPNIGRTDTLNHYYKSHHFNNNVMGLSIGSDGMGQGVILNSK
NQQVQDIPISCTSVPISTSTLLTSSGNGTNINPCSMSPPLPMSLPMPTMGLHGSIKGFMG
HNQNPQMEPLLFKGSSKENVQETQI
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgttgtcatggtgaccaacccctgtaccccttcccccctcctctggttggtccag
cttttgttgtggtttcacaaccatggaccacagctgacagaggcagcacccccctgcccc
aacccctgtacctgctccaatcaggcgagccgtgtcatctgtacaaggaagagtttagat
caagtcccagacagtatttcagagaacacaagatacctcaatctacaagagaacacaatt
caggtgatcaagtctgacacatttaagcacctgcggcatttggaaatcctccagctctca
aagaaccacatccgacaaattgaggttggagctttcaatggccttcccaatctcaacacg
ctggagctttttgacaaccgtctcacagtggtaccgtcacaagcctttgagtacctgagc
aagctaagggaactatggctacgaaacaaccccattgagacattgcccgcatttgccttt
caccgtgttccctctttacgccgtctggatctaggggaactcagaaagctggatttcatc
tcagaggctgccttcgaaggtctggtcaacttgcgcttcttgaatcttggcatgtgcggc
ctgaaggacatccctaacctcaccccactagtacgactagaggagttagagctgtcaggg
aaccagttgggtttagtgaggcctggatccttccagggtcttgtgtctcttcgcaagctg
tggctaatgcactccagagtgtcagtcattgaacgcaatgcttttgatgacctcaaaaac
ttggaggagctcaacctctcacacaattccctacattccctaccccatgacctcttcacc
cctttgcaccagctggagagggtacatctcaaccacaacccctgggtgtgcaactgtgat
gttctgtggctcagctggtggctgaaagaaactgttcccagcaacactacatgctgcgct
cgatgccatgcgcctccagctataaaaggcaaatacattggggaactagatcagagccac
ttcacctgctttgccccagtgattgttgagccacccactgaccttaatgtcactgagggc
atggtcgctgagctcaaatgtcgtactggaacctcgatgacctctgtgaattggtttact
ccaaatggcactctaatgacccacggatcataccgagttaggatctcagtgcttcatgac
ggaacactgaacttcacaaacgtcaccgtgcaagacactgggcagtacacttgcatggta
accaactccgctggaaacaccactgcgaccgctgtgctcaatgtgtccgcttcagacccc
agcaacagctacagctatttcaccactgtcactgtggaaaccgtcgagacagtgagagga
gatgaggagaactcagcaagacagtatattaacgagaccttcatagatttccctaatcct
actgttcaaagaggggtgttagagggtcgacctggcatcactatttcaccttctctctcc
tctctttcctcactgtccccacgagccaacagagctactgaaaatgcagtgactgtgtcc
ataatggatgtaactaatattccaggcttggatgatgtaatgaaaacaactaagataatc
attggttgctttgtggccattacctttatggcagctgtaatgttggtggtcttctataaa
cttcgaaagcagcaccagctacacaagcatcatggacctgccagagccattgaaattgtc
aatgtggaagatgagatcggagctggggccgggagtggcatctcaggtggttcaacgatg
aattctggcagtggagaaggaaccctaaggatacatcatccagaaatagtcaaccttccc
aacattggccgtacagatactctcaaccattactacaagagccatcatttcaacaacaac
gtgatgggtcttagtattggctctgacgggatgggacaaggagtgatccttaatagcaag
aaccagcaagtccaggatatccccatctcctgtacctcagtcccaatctctacatctact
ttgctcacctcatcaggcaatggcaccaacatcaacccctgttctatgtccccaccgctg
ccgatgtctctccccatgcctaccatgggcttacatggatcgatcaagggtttcatgggc
cataaccagaatcctcaaatggagcctcttctcttcaaggggagctcgaaggaaaacgtc
caagagactcagatctaa
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