Etheostoma cragini (Arkansas darter): 117936989
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Entry
117936989 CDS
T07493
Symbol
bms1
Name
(RefSeq) ribosome biogenesis protein BMS1 homolog isoform X1
KO
K14569
ribosome biogenesis protein BMS1
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
117936989 (bms1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ecra03009
]
117936989 (bms1)
Ribosome biogenesis [BR:
ecra03009
]
Eukaryotic type
90S particles
GTPase
117936989 (bms1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RIBIOP_C
AARP2CN
GTP_EFTU
Tsr1_G-like
MMR_HSR1
AAA_22
RNA_helicase
AAA
AAA_16
Motif
Other DBs
NCBI-GeneID:
117936989
NCBI-ProteinID:
XP_034716473
LinkDB
All DBs
Position
21:17925700..17945103
Genome browser
AA seq
1228 aa
AA seq
DB search
MDGKVKEQKRHQQKHSGPKAERKKLKKQEGSTEEDGRKRNPKAFSVQSAVRMAKTFHRSQ
DIKTKKHHIPHVDRTPLEPPPIVIVVVGPPKVGKSTLIRCLIKNFTRQKLGDICGPVTIV
SGKKRRLTFMECNNDINTMIDLAKVADLVLMLIDASFGFEMETFEFLNICQVHGFPRIMG
VLTHLDSFKNNKTLRKTKKNLKHRFWTEVYQGAKLFYLSGMVYGEYQIQEVKNLGRFISV
MKFRPLVWQTSHPYVLVDRMEDLTDPERVRTEPKCDRTVSLYGYLRGTHLKNKGQVHIPG
VGDFQVADVNFLPDPCALPEAQKKRALNEKERLLYAPMAGIGGVVYDKDAVYIDLPASHV
NQQQEEVRPTTELVQSLIDTHATLDAKMAASKVSLFSGSATLDSTDVGEQSREQGPQEEC
VWDPKTQRKRRKVVFTDKEEDVSGSSGDDDDGDDDDDDDNSDIDSEDGDQEEQEEDEDED
NLSTFLKDTRAEAAETEKTVTDAPPAKKPKLEEGKKRREESVEVPAFADSEDDLEMSEEE
SEEEGENVRADSGHCSEEDEEEREDEEDDTEESEDESMEEDAAVATVKKQAASEEEKEEE
EEEQGSLRWKEGLQQKASEAFLRQQKAAPNLRKLVYGSVVEADDSDDEDQELGGLFRVSR
PQNGKKSRANGLDSSRFDPDTSHNWDLEEMLNSIRDCFVTGKWEEDQDAATLLKEDEELY
GDFEDLETGKVHKGHTGEQDHAEQNNENDEDDEDNAESLVKVDDDEVQKKKRLEKKQRLK
ERFNAEYDDEDATYFDDLKEEMQKQAELNRAEFADVDDETRVQYEGFRPGMYVRLEISSL
PCEFVTNFDPHYPIILGGLGSSEGNVGYLQMRLKKHRWYHRILKTRDPLILSLGWRRFQT
IPLYHIEDHNGRHRLLKYTPQHMHCGASIWGPVTPQGTGFLAVQSVAGTKANFRIAATGV
VLDLDKSVTIVKKLKLIGYPYKIFKNTSFVKGMFNSVLEVAKFEGASVRTVSGVRGQIKK
ALSTPPGAYRATFEDRLLMSDVVFLRSWYPVSVPQLYNPVTSLLLPAGQKDSWAGMRTLG
QLKHDLGIRNKPNTDSLYKPVVRAPRHFNRLHIPKELQKALPFKSKPKQQQAKGKTPRDL
QRPSVIREPHEKKVAALLLALSTVHNHKRKKAHTAQHAKHKEFLQQKEKLEEAKLKRQKE
ARKKLYRIQGQVDKKKSRSSLKGAPQDD
NT seq
3687 nt
NT seq
+upstream
nt +downstream
nt
atggacgggaaagttaaggaacagaagcgacatcagcagaagcacagcggacccaaggcc
gagaggaagaagctcaagaagcaagaaggctccacagaagaggatggacggaaacgcaat
cccaaggccttctcagttcaatcggctgtacgcatggccaagacgttccacaggtcccag
gacataaagacaaaaaaacatcacatcccccatgtagaccggactcccctggaaccccct
ccaattgtgattgtagtagtcgggccccccaaggtgggaaaaagcaccctgatccgctgc
cttatcaaaaacttcacccgtcagaagctcggggacatatgtggacctgtaaccatcgtc
tctggaaagaagcgccgcctcactttcatggagtgtaacaatgacatcaatacaatgatc
gacctcgcaaaagtagctgacctggttttgatgctgattgatgccagctttggctttgag
atggagacttttgagttcctcaacatctgtcaggtgcacggcttccctcgcatcatgggt
gtgctgactcacctggattcattcaagaacaacaagactctcaggaagaccaagaaaaac
ctcaagcaccgattctggaccgaggtttatcagggtgccaagctgttctatctgtcgggt
atggtgtacggtgaatatcagattcaagaagtgaagaacctcggtcgcttcatctcagtc
atgaagtttcgtcctctggtgtggcagacctcccacccttatgtgctggttgaccgcatg
gaggacttaactgaccctgagcgagtgaggacagagcccaagtgtgaccggacagtgtca
ctctacggctacctgcgagggacacatttgaaaaacaaaggccaggtccatatcccaggt
gtgggagactttcaggtggcggacgtgaacttcctaccagacccgtgcgctctgccagag
gctcagaagaagcgagcgctgaatgagaaggaacgtctgctctatgcacccatggctggc
atcgggggggtcgtgtacgacaaagacgcagtgtatattgaccttcctgctagccacgtc
aatcaacagcaggaggaggtgcggcccaccacagagctggtccagtctctcattgacacg
catgccaccctggatgccaagatggctgctagtaaggtgtctctgttcagcggctcggcc
accctggattccacagacgtgggcgagcagagccgagagcagggtcctcaggaagaatgt
gtctgggaccccaaaacccagaggaagaggaggaaggtggtcttcactgacaaagaggag
gatgtcagcggctcgagtggtgatgatgatgatggtgatgatgatgatgatgatgataat
agcgacattgacagtgaagacggtgaccaggaggaacaggaagaggacgaagatgaggac
aacctgtcaacatttctcaaagacacaagagctgaagcggccgagacagaaaagactgta
acagacgctccgccagcaaagaagccgaaattagaggaggggaagaaaaggagggaggag
agcgttgaggtgccggcgtttgctgacagtgaagacgatttggagatgagcgaggaagag
agtgaagaagagggggagaacgtgagagcagactccggccactgttcagaagaggacgag
gaagagagggaagatgaggaagatgatacagaggagtctgaagatgaatcaatggaggag
gatgcagctgtcgctacagttaagaaacaagcagcgagtgaggaggagaaggaggaagaa
gaggaggagcaggggagtctgagatggaaggagggtctgcagcagaaagcatcagaagcg
tttctacggcaacaaaaagctgcccccaatctgagaaaactggtttatggttcagttgta
gaggcagatgattctgacgatgaggatcaggagctgggggggctgtttcgagtcagccgc
cctcagaacggcaaaaagtcccgagccaatggtcttgacagctcccgtttcgaccccgac
acctcccacaactgggacttggaggagatgctaaactccatcagggactgctttgttaca
gggaagtgggaggaggaccaagatgctgccacactgttgaaagaggacgaggagctgtat
ggtgactttgaggatttggaaacgggaaaagtccacaagggccacactggggagcaggat
cacgcggagcagaataatgagaacgatgaagatgatgaggataatgcagaaagtctggtg
aaggtggatgatgacgaggtccagaagaagaagcgtctggagaagaaacaaaggctgaaa
gagcgctttaacgccgagtatgacgatgaagacgccacttacttcgacgacctgaaggag
gagatgcagaagcaggctgagctgaacagggccgagtttgccgatgtggatgatgagacc
agagtgcagtacgaaggcttccgaccaggaatgtacgtcagattggaaatctcctctctg
ccctgcgagtttgtcaccaacttcgatccccattatcccatcatccttggagggctgggc
tccagtgagggcaacgtaggatacctgcagatgcgactgaagaaacaccgctggtatcac
cgcatcctaaagacacgggaccccctcattttgtcactaggctggaggcgcttccagacc
atccccctctaccacattgaggatcacaacggacgccaccgtctgctcaaatacacacct
cagcacatgcactgtggagcatccatctggggtcctgtcacgccacagggcaccggattc
ctggctgtacagtcagtagcaggaactaaagctaatttccgaattgcagccacaggagtc
gtcctggacctggataagtctgtgaccattgtgaagaagctcaaactcatcggctacccc
tacaagatctttaagaacacctccttcgttaagggcatgttcaactcagtgctggaggtt
gctaaatttgaaggggcttctgtacgaacagtatcgggggtcagaggtcagatcaagaag
gcgctgtctacaccgcctggtgcttacagagccacgtttgaggaccgcctgcttatgagt
gacgtggtgttcctgcgctcctggtatccagtgtctgtccctcagctgtacaaccccgtc
acctctctgctgctgcctgctggtcaaaaggacagctgggcgggcatgaggaccctgggg
cagctaaaacatgacctgggcatccgcaacaaacccaacacggactctctgtacaagccg
gtggtccgagctccaaggcacttcaaccgcctccatatccccaaggagctccagaaggcc
ctgcccttcaagagcaaacccaaacagcagcaagccaaaggaaagacgcccagagatctc
cagaggcccagtgtgatcagagagcctcatgagaagaaggtggcggccctgctcctagct
ctgagcacagtccacaaccacaagaggaagaaagcccacacagcgcagcacgccaaacac
aaggagttcctgcagcagaaagagaaactggaggaggccaagctgaagagacagaaggag
gctcgtaaaaaactgtaccgcatccagggccaggttgacaagaagaagagcaggtccagt
ctgaagggggcgccccaggacgactaa
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