Etheostoma cragini (Arkansas darter): 117937026
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Entry
117937026 CDS
T07493
Name
(RefSeq) putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32
KO
K18994
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32 [EC:
5.6.2.6
]
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ecra03041
]
117937026
Enzymes [BR:
ecra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
117937026
Spliceosome [BR:
ecra03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
117937026
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
HA2_N
Motif
Other DBs
NCBI-GeneID:
117937026
NCBI-ProteinID:
XP_034716541
LinkDB
All DBs
Position
21:6261637..6267333
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AA seq
737 aa
AA seq
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MSEENNSAEPDICPESEECPAEDSFGFGDDLELNQFDGLPFSSRYYKLLKERKSLPVWKV
RCDFKEALVNNQLVIVSGTAKTGRSTQIPQWCAEFCLSAQYQHGMVVCTQTNRQQAVDLA
LRVADEMDVNIGHEVGYTIPLETCCSSDTVLRYCTDDMLLREMMSDPFLEHFGVIIIDQA
HERTVSTDILLGLLKDILLQRTELRVVVLAIPPVTDKLLSHHGSVPLISLEASSPAEAVH
SNCSNKDYFFSALRLVLEIHRTKEDGDVVVFFASAEEVHCAHSILQREGTRLGAELGQMV
PVVLCPRRGGLLPALTDQPVSKRSRTVYLSTKQGEDIWWATKSVNFVIDTGVQKKMVYNP
RIRANSEVLQPISQCQADLRGRLSGPTGKCFCLYPKDSQLPSENSPQILESNITPTVLFL
KRMEIAGLGQCDFMDRPDPEGLMQALEELDYLAALDDDGNLSEIGIIMSEIPLDPQMAKA
LLASCEFDCVSEMLTIAAMLSASSCFPEPPAGMTHEAVQCHRKFQHPEGDHFTLINIYNA
FKQSQREQYFTAEKWCQDYFLDHSALKTAEAIRAELTDTLNRIELPISEPSFGTKTNTHN
IKRALLAGFFMQIARDVDGSGNYFILTHKHMAQAHPLSCYGAQSQKLGLPEWVVFHEYTL
SDNNCMRTVSEISPQVYIQMAPLYFFYNLPPSESKDILQEMLDPDGSRKCEDGKQKAITV
SSGCSVLPQTYDRCVIQ
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaagaaaataattcagcggagccagacatttgcccagaaagtgaggaatgtcct
gcggaagattcctttggctttggagatgatctggagttaaatcagttcgatggattgccc
ttttcctcccgttactacaaattactaaaagagagaaagagtctgccagtgtggaaggtc
aggtgcgactttaaagaagctctggtaaacaaccaactggttattgtgtctgggacagca
aagactgggaggagcacacagattcctcagtggtgtgcagagttctgtctgtccgcccag
taccagcacggcatggttgtgtgcacacagaccaacagacagcaggctgtagatctggcc
ttgcgcgtggcagatgaaatggacgtcaacataggccatgaagttggctacaccatccct
ctggagacctgctgctcctctgacactgttctgaggtactgcactgacgatatgctgctg
agggaaatgatgtcagacccttttctggaacactttggggtcattatcatcgaccaggcc
cacgagaggacagtaagcacagacatactgctgggtctcttaaaggacatcctgctgcag
aggaccgagctcagagtggtggtcctcgccatcccgcccgtgaccgacaagctgctgagc
caccacggcagcgtcccgctcatcagtctggaagcctcgtctcctgctgaggcggtccac
agcaactgcagcaacaaagactacttcttctcagcactgagactggtgctggagattcat
cgaaccaaagaggacggagatgttgtcgtgttttttgcctcagctgaggaggttcattgt
gcccacagcatcctccagagagaaggcaccaggctgggagccgagctgggtcagatggtg
cctgtggtcctgtgtccacgccgaggagggctactgcccgccctcactgaccaaccagtc
tccaagaggtccaggacggtttacctctctaccaaacagggggaggatatttggtgggcc
accaagtctgtcaactttgtcattgacacaggagtccaaaaaaagatggtgtacaatcca
agaataagagctaactcggaagtactgcaacctatcagtcagtgtcaggcagacctacgc
gggcggctgtctggacctacaggtaaatgtttctgcctatatccaaaagacagccagctt
ccttcagagaactccccacagatcttggagtccaacataacaccaacagtcctattccta
aaaaggatggagatcgccggccttggacagtgtgatttcatggacagaccagatcccgag
gggctcatgcaggcgttggaggagctggattatctcgcagctttggacgacgatggcaac
ttgtctgagattggcatcataatgtctgaaatcccactggaccctcagatggccaaagcc
ttgctggcatcctgcgagtttgactgtgtgagtgagatgttaacgatcgcagcgatgctg
tctgcgtcaagctgcttcccagagccacctgctggcatgacccacgaggcagtccagtgt
cacagaaagttccagcaccctgaaggcgatcacttcaccctcataaacatctacaatgcc
ttcaaacaaagccagagagaacaatatttcaccgctgaaaagtggtgccaggactatttc
ctggatcattctgccctgaagacagctgaggccattagagccgagttgaccgacactctg
aacaggatcgagcttcccatctctgagccttcctttggaaccaaaaccaacacccacaac
atcaaaagagctctgctggccggcttcttcatgcagatcgctcgggatgtagacggatca
ggaaactacttcattctgacacacaagcacatggcccaggcgcacccgctctcctgctac
ggggctcagtcccagaagctggggctgccagagtgggttgttttccacgagtacaccctg
tcagacaacaactgcatgagaacagtctctgaaatttcccctcaagtgtacattcaaatg
gcaccgctgtacttcttctacaatctgccccctagtgaaagcaaagacatactgcaagaa
atgttggacccagacggatccagaaaatgtgaagacgggaaacaaaaagcaatcacagtc
agcagtggctgttcagtgttgccgcagacttatgacagatgtgtgattcaatga
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