Etheostoma cragini (Arkansas darter): 117937084
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Entry
117937084 CDS
T07493
Symbol
abca5
Name
(RefSeq) ATP-binding cassette sub-family A member 5
KO
K05648
ATP-binding cassette, subfamily A (ABC1), member 5
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
117937084 (abca5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ecra02000
]
117937084 (abca5)
Transporters [BR:
ecra02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA5, 6, 8, 9, 10 subgroups
117937084 (abca5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
R1_ABCA1
RsgA_GTPase
AAA_23
AAA_29
MMR_HSR1
Bac_rhamnosid_N
IIGP
Motif
Other DBs
NCBI-GeneID:
117937084
NCBI-ProteinID:
XP_034716644
LinkDB
All DBs
Position
21:441876..474540
Genome browser
AA seq
1641 aa
AA seq
DB search
MYTIPEASIRETTSRPHVVQMRHAGGMQPVYGRDAGVWHQTRSLLYKNLLIKWRTKQQSL
QELILPLLLLGLLVLISTLNPHVYYGGISTMELERDDHIFKGLGYTPITNITNHIMEEVA
QEMHLQDHLEMFASEEDLENASLYEPSSYVGVVFMDSAATSYKLRFPYNQLPLPSDYTET
IANCFTSSVNCRAANYWYSGFIRLQSLIDAAIIQMQTKRSVWSEMDLQVVMMGHPGSVEV
QKFPHALISIYLVLAFTPFVTFLIVNVAAEKEHRLKDTMTMMGLYDTSFWLSWGLLYAAL
VTTMSILMSIIATYTALFPNSDFFVIFLLIFLYGISSIFFSFMLTPLFKKPKFASTVGSM
LTVMFGCLSLFTVLMKDFPQPLVWLLCLLSPSAFSIGIAQVVYLEAQGDGAVFSSLANGP
HPLYVPLLMLVLDCILYLLLALYLDQVLPGEFGIKRSLVYFLKPSYWSKRSKRYVEVNSV
YDTEANGAPGGDESVEPVSAEFRGKEAIRINNIQKVYKEKDNVVEALRGLTFDIYEGQIT
ALLGHSGAGKSTLMNILCGICQPTDGSATIYGSPVSEIADGSEMKQLVGICPQFNIIFDV
LTVEEHLRIFAAIKGIPPSNIDAEVTKVLKDLDLEKIMTAQAKNLSGGQKRKLSVGIAIL
GDPKILLLDEPTAGMDPCSRHQVWSLLQSRRAGRVIVLSTHYMDEADILADRKAVISQGQ
LKCVGSSLYLKIKCGVGYHLRMSVNERCEAENITSLIKQHVPKATLSRQHEAELTFTLPF
ESIETFSGLFSELDCQPKLGIANYGVSMTTLEDVFLRLESEAEVDQADYSVFNREQAEDE
CDNASLDDTDQRLLTFSDSKSDVVSGHALWRQQFCTVAWLHMLNMRRERKAFVYTLALFL
VFVAAVLVLALATGNIQIHSPDRQFLPIYLLKRNQSPRRYATSLLVQNSTGSDISDFIHN
LESQDIKVDLMKHSDYMSAAPHSAGINVTGSSKGFRYSVAFNSTTVHSLPMAVNVLSNAL
LKGLNGTKPIRTWTKPFDYQIPDATSYALVYIEAIILGMLAAGMPAYFAMDHTRDREIKC
RSTLRISGLVPSAYWCGQAAVDIPFYYLILCSMNIVLFSFHSGNLLTSSNLTAVVLCTVG
FGPAMILFTYVFSFGFARVQSNRDFFSVISMMVCVVSASLVQLSFVNDSPGLTRNLHNAL
CFFNPLYPLMGCLNCITKATFLPSLYEENFLWKNLLIAVVAPYLQCIMLLFLLRWLEIRY
GGRTMKNDQFCRISSKSKPKVEKNPEEALNEDEDVQMEKARVKEALTCQSCEEKPAVVVS
NLRKQYKGRREGFSLNKSRKVATKNISFCVRKGEVLGLLGPNGAGKSTIMHMLSGDTDPT
AGQVLMGDYSTEFRPVDSPLEHVGYCPQVNPLWPRITLQEHVEIYAAIKGLKGQDVPGII
RRVVNALELKDHLNKQAKSLSAGLKRKLCFALSMIGNPQIVLLDEPSSGMDPKSKQRMWR
AIRAAFKNRQRGAVLTTHYMEEAEAVCDRVAIVVSGQLRCIGSIQHLKGKYGQGYSLEVK
LREELTGLQQVALLHKEILRIFPHAARQESFATLMVYKIPMEDVKSLAKSFSQLESAKQT
FNFEEYNFSQSTLEQVCSLTH
NT seq
4926 nt
NT seq
+upstream
nt +downstream
nt
atgtataccatacctgaggccagcattagggagacgacctctcgtccacacgtcgtccag
atgaggcatgctgggggtatgcagcccgtgtatggacgagatgctggagtctggcaccaa
acgagaagtctcctctacaagaacctgctcatcaaatggaggaccaagcagcagagtctt
caggagctgatcctacctctgctgctgttgggtctcctggtgctcatcagcaccctgaat
cctcacgtttattatggaggcatcagcactatggagctggagcgtgacgaccacatcttc
aagggcctgggctacacacccatcaccaacatcaccaaccacatcatggaggaggtggcc
caggagatgcacctacaggatcatctggagatgtttgccagcgaggaggacctggagaac
gccagtctgtatgagccttccagctacgttggtgttgtgttcatggacagcgctgccacg
tcgtacaagctacgcttcccctacaaccagctgcccttacccagcgactacacagaaact
attgccaactgttttaccagctcggtgaactgcagagcagctaattactggtactccggc
ttcatccgcctccagtccctgatcgatgctgctatcatccagatgcagacgaagcgttca
gtgtggagtgagatggacctgcaggtggtaatgatgggtcatccgggctcggtggaggtg
cagaagttcccccacgccctcatctccatctacctggtcctggccttcacacccttcgtc
accttcctcatcgtcaacgtggcggcggagaaggagcatcgcctcaaagacaccatgacc
atgatggggctctacgacacgtctttctggttgtcatggggcctcctgtacgcggctcta
gtgaccaccatgtccatcctgatgtccatcattgccacgtacacggccctgttccccaac
agtgacttcttcgtcatcttccttctcatcttcctctacgggatatcatcgatctttttc
tccttcatgctgactccgttatttaagaagcccaagtttgccagcacagtgggctccatg
ctgacggtgatgtttggctgcctgtccctcttcaccgtgctgatgaaggacttcccccag
ccgctggtctggcttctctgtctgctctcccccagtgccttctcaatcgggatcgcacag
gtggtttacctggaggcccagggagatggggctgtgttttcctccctggccaacggccca
catcctctttacgtgcccctgctcatgctggttttagactgcatcctctaccttctgttg
gctctctacctagaccaggttctgcctggggagtttggaataaagaggtccttggtgtac
ttcctgaagccctcctattggtccaaacgcagtaagcgctacgttgaagtgaactccgtg
tacgacacggaggcgaacggcgctcctggtggggacgagtcggtcgagcctgtttcggcc
gagttcagagggaaagaggccatccgcatcaataacatccagaaagtgtacaaagagaag
gacaacgtggtggaggctctgagaggtttgacgtttgacatctacgagggccagatcacg
gctctgctgggacacagcggggcgggaaagtccactctcatgaacatcctgtgtggcatc
tgccagcccaccgacggctcggccaccatctacggctcccccgtgtcggagatcgcagac
gggtccgaaatgaagcagctggtgggaatatgcccccagttcaacatcatctttgacgtg
ctgactgtggaggagcacctcaggatattcgcagccatcaaagggatcccgccctcgaac
atcgatgctgaggttaccaaagtgctgaaggatctggacttggagaagatcatgactgct
caggccaagaatctgagcggaggccagaagaggaaactctccgtgggcatcgccattctc
ggcgatcctaagatcctgctattggacgagcccacagcgggcatggacccctgctccagg
caccaggtgtggtcgctgctgcagagccggcgagccggcagagtcatcgtcctcagcaca
cactacatggacgaggcggacattcttgctgatcgcaaagctgtgatctctcagggacag
ctgaagtgtgtcggctcttctctgtatctcaagatcaagtgtggtgtcggatatcatctc
agaatgtctgtcaacgagaggtgtgaagctgaaaatatcacctcactgatcaagcagcac
gttcccaaggctacgttgtcccgccaacacgaggcagagttgacgttcacgctgccgttt
gagagcattgaaacgttttcaggcttgttctcggagctcgactgtcaacccaaactggga
atcgccaactatggggtttccatgacaacactggaggatgtgtttcttcgtctggagtca
gaggccgaagtggaccaagctgactacagtgtgttcaatcgggagcaggcggaggacgaa
tgtgacaacgcctctctggacgatacggaccagcggctgctgaccttctcagacagcaaa
tccgacgtggtgtcgggtcacgctctgtggcgccagcagttctgcaccgtggcctggctg
cacatgctcaacatgcgccgggagaggaaggccttcgtttacaccctggccttgttcttg
gtgtttgttgctgctgtgctcgtcctagctctggccacaggaaacatccagatacactcc
ccggaccgccagtttctgcccatctacctcctcaaaaggaaccagtcgccacggagatac
gccaccagcctcctggtgcagaactcaacaggctctgatatttcggacttcatccacaac
ctggagtctcaggacatcaaagtggatttgatgaaacacagcgactacatgtccgcagct
ccccacagcgccggcatcaacgtaacaggatccagcaagggtttcagatacagtgttgcg
ttcaacagcaccacagttcactccttacccatggctgtcaacgtactaagcaacgctctt
ctaaaaggcctgaatggaactaaaccgatcagaacctggaccaaaccatttgattatcaa
atcccggatgccacgtcctacgctctggtttacatcgaggccatcatactgggaatgctt
gcagctggaatgcctgcgtatttcgcaatggaccacactcgagacagagagatcaagtgt
cgctctacactgcggatctccggtctggtgccgtcggcctactggtgcggccaagccgcc
gtggacatccccttctactacctcatcctctgctccatgaacatcgtcctcttctccttc
cactctggaaacctgctcacgtccagcaacctcaccgctgtggtcctgtgtactgtgggt
tttggtccagccatgatcctcttcacctacgtgttttctttcggcttcgcccgagtccag
agcaacagagatttcttctctgtcatctccatgatggtgtgtgtggtgtcagcctcgctg
gttcagttgtcctttgtgaacgacagccctgggttgaccagaaacctgcacaacgccctg
tgtttcttcaaccctctttatcctctcatgggctgcctcaactgcatcaccaaggcgacc
ttcctcccctctctgtacgaggagaacttcttgtggaagaacctgcttattgcggttgta
gctccgtatctccagtgcatcatgctgcttttcctgctccgttggctcgagatccgttac
ggtgggaggacgatgaaaaacgatcagttctgcaggatctcatccaagtcaaagcccaaa
gtggagaaaaatccagaagaggcactaaacgaggatgaggatgttcagatggagaaggcc
agagtgaaggaggccctcacctgccagtcctgcgaagagaaaccagcggtggttgtgagt
aacctgaggaagcagtacaagggcagaagagaaggtttttctctgaacaagagtaggaaa
gtggccacaaagaacatctccttctgtgttcgcaaaggtgaagttctgggattgttggga
cccaacggagcaggaaagagcaccatcatgcacatgttgtcaggcgacacggaccccact
gccggccaggtgctgatgggggactatagcactgagtttcgtcccgtggacagtcctctg
gaacatgtgggctactgtcctcaggtgaaccctctgtggccccggatcaccctgcaggag
cacgtggagatctacgctgccatcaagggcctgaaaggacaggacgtcccggggatcatc
agacgtgtggtgaatgctctggagctaaaggaccacttgaacaaacaagccaagtccctg
tcagccggactcaagagaaagttgtgcttcgccttgagtatgatcgggaatcctcagatc
gttttactggatgagccgtcatcggggatggaccccaagtccaaacagcgcatgtggaga
gccattcgtgctgcgttcaagaaccgtcagcggggagccgtcctcaccacgcactacatg
gaggaagcggaggccgtgtgcgaccgcgtggcgattgtggtgtccggccagctgagatgt
atcggctccattcaacatttaaaagggaaatacggtcaaggttacagcttggaggtcaaa
ctccgagaggagttgacggggctccagcaggtggcgctgctgcacaaagagatcctccga
atcttccctcacgctgcgcggcaggagagctttgctactctgatggtttacaagatcccc
atggaggatgtcaagtcactggccaagtctttctctcagttagagagtgccaagcaaacc
ttcaactttgaagagtacaacttctcccagtcgaccttagagcaggtatgttctctaacg
cactga
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integrated database retrieval system
