Etheostoma cragini (Arkansas darter): 117937211
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Entry
117937211 CDS
T07493
Symbol
tdrd1
Name
(RefSeq) LOW QUALITY PROTEIN: tudor domain-containing protein 1
KO
K18405
tudor domain-containing protein 1/4/6/7
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ecra03036
]
117937211 (tdrd1)
Chromosome and associated proteins [BR:
ecra03036
]
Eukaryotic type
Gene silencing
piRNA pathway
117937211 (tdrd1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TUDOR
SMN_Tudor
zf-MYND
MYND_ZMYND11_ZMYD8
zf-HIT
ANCHR-like_BBOX
Motif
Other DBs
NCBI-GeneID:
117937211
NCBI-ProteinID:
XP_034716892
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All DBs
Position
21:8964311..8981118
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AA seq
1188 aa
AA seq
DB search
MCNTXYLCHKHVHSADAMYRSFSPNLVRPNQPLRKPSSTPVALISTLASPSHPTMPNATP
VRPASGAVGDGISRDQTAVLGSIPPALTVYFCNFCGQQGNFRCKRCKKTPYCSVVCQTED
WKAHRHVCKSIDLEPEQETTKETVSLVTGDRAGLVESKQGDASSLQRVYLKDLHMTKIIK
GTDIQATVVEFYSPGRFFLLAQSPELLEALQYISAELQKTNSCPSMRTYVPHVGEVCAVQ
FSCDLNWYRGLVQTLAADQKTANILYIDFGNEEHVPVDRIKPLAANIQPYCPCAMECHIA
GVVPVTGNWSGECRVSVKQLLAGKLVTVRLVESLENGRIHAVDILLSMGKKLSTFLLEQG
YAAEKTVNETPTQQEINAMVSASLDNFMRLSDGKDDNTWAQPPEPLKLAVGDSFSVVVTH
LQSPNEIIVQKVENAGVIQELQLKLREHCCQAPAPQNFRPAPGTVCCAQFSEDKQWYRAK
VLAYASEERVCVGYLDFGNSEEVDLSYLQPISTLLLALPTQAMACGLAGVQPVGESWSED
CLLALQRRVSNRILRLEIQGAHEGKALVAMIDEASDPQANVAELLIFAGFAAPAPVPTSS
DQQADETATAAAEPHGVPAPACEPLVWSFSELPCDGQTVALLASVVENPQEFYCRINNPT
DHQRLIELKAELKQHCAAEASPFVPKVGEPCCAMFPGNKEWYRAMVNELSKEVSLNFVDY
GYSMKVGKDHIRSITPRLLKLPFQAVRCWLTGVEPLGSEWSSEALLWFQSLVDGKQLSAR
VFCATEQGYGIELESEGRNVAAALISEQLAKVPGSVPKETHATTGSEHKLPENIRENENS
QMHVQASNQTGTSSKKIPSEAPSFPVDWKTVELPLNDTFQPCIAAITSPSLFYLLVPNQV
DQQKLQEVMMELVAYCGNIRASLSSTVLSRPVPGAACCAQFSADNNWYRAVVLEVGENEM
SVIYADYGNSEKVPFSRVLPITKHLLQLPFQITRCTLTGKEHFPSEFPEEVLQMFQSQLL
NGVLATVQSFSDSVNVLSLTLPTERGGGNLSTMILDTLQHQASSNPCSPTVRKADQTDSS
TSTASTTVVPDCPQPIVTPETPKGLKHTTATTGTTIIPEQEPQTTQLKTNTSAEDPAQKI
VAQMEPLCKIDPQASGCCCQNLMTKIDHLEHLVQLQLSLIKQLVGQTK
NT seq
3567 nt
NT seq
+upstream
nt +downstream
nt
atgtgcaacacancttacctctgccacaaacacgtgcattcagctgacgccatgtaccgc
tcgttttctccaaacctggttcgacctaaccagcccttgaggaaaccatcatcgaccccc
gtggctcttattagcacattagcttctccaagtcatcccaccatgcccaatgcaacacct
gtgcgccccgcgtcaggcgccgttggagacggaatcagcagggatcaaaccgcagtgtta
ggatccataccaccagcactgactgtatacttctgcaacttctgtggtcagcaaggaaat
tttcggtgcaagcgctgcaagaagactccttactgctctgtggtgtgtcagacagaagac
tggaaggcacacagacacgtgtgcaaatccattgatctagaacctgaacaagagacaact
aaggaaacagtttcactggtgacaggagacagagccggcctggttgagtctaagcagggc
gatgcatccagcctccagcgggtctatttgaaggacttgcatatgactaaaatcattaag
ggaacagacatccaggcaactgttgtagagttctacagccctggcaggttttttctcctt
gcccaaagtcctgagttgctggaagctctgcaatacatcagcgctgagcttcagaagact
aacagctgcccatcaatgaggacatatgtaccacatgttggtgaggtctgcgctgttcag
ttctcatgtgatctgaattggtacagaggccttgtccaaactttagctgctgaccagaag
acggctaacatcctttacattgactttggcaatgaagagcatgtaccagtggacaggatc
aagcctctggctgctaatatccagccatattgtccatgtgcaatggagtgccatatcgct
ggggtggtcccagtgactggcaactggtcaggcgagtgccgtgtgtcagtgaaacagctg
ttggccggcaagcttgtgactgttagactggtggaatcactagaaaatggccgaatccat
gctgtggatatcctgctttcaatgggaaagaagctgagcacattcctccttgagcaaggt
tatgcagcagagaaaaccgtcaatgaaactccaactcagcaagaaataaatgccatggta
agtgcatccttggataacttcatgcgtctctctgatgggaaggatgacaacacctgggct
cagccaccagagccactgaaactggcagtaggtgactccttctctgttgtggtcactcat
cttcagtcacccaatgaaattatagtacagaaggtggagaacgctggagtgattcaggag
ttgcagctgaagctgagggaacactgctgccaggcaccagcccctcagaacttcaggcca
gcccccggcacagtttgctgtgcccagttctcagaggacaagcagtggtacagggctaaa
gttctggcttatgcatcagaggaacgcgtctgtgttggctaccttgattttggcaactct
gaggaggtggatttaagctatctgcagcctatcagcactttactactggccctgcccacg
caggctatggcttgtggtttagcaggggtgcagcctgttggggagagctggtcagaggac
tgcctgctggccctgcagcgaagggtatcaaaccgaatactgcgccttgagatccaagga
gcacacgagggcaaggctttggtggccatgattgatgaggccagtgatcctcaggccaat
gtagccgagctgttgatctttgctggtttcgctgctcctgctcctgttcccaccagtagt
gaccagcaggctgatgagacagcaactgctgctgcggaaccacatggtgtgccggcccca
gcttgtgagcctctggtgtggtcttttagtgagcttccttgtgacggccagacagtggca
ctgctagccagtgttgtggagaaccctcaagagttttactgccgaatcaacaatcctaca
gaccatcagcggctgatagagctcaaggctgagttgaaacagcattgtgcggcagaggcc
tcaccttttgtgcccaaagtgggggagccctgttgtgccatgtttccaggtaataaagag
tggtatcgggctatggtaaacgagctgtctaaagaagtgtctctaaacttcgtggactat
ggttatagcatgaaagtgggaaaggaccacattcgatccattacaccccgactcctgaag
ctacccttccaggcagttcgctgctggctcacaggtgtggagcccctgggatccgagtgg
agcagtgaagccctgctgtggttccagagtctggtggatggcaagcagctttctgcacgt
gtcttttgtgccactgaacaaggctacggtattgagctggagagcgaagggcggaatgtg
gcagctgccctcatttctgagcagctagccaaagttcctggatcggttcccaaagagaca
catgcaaccacaggctctgaacacaaactccctgagaacatacgggaaaatgaaaacagc
caaatgcatgtgcaagcctccaaccagacaggaaccagttccaaaaagattccatcagaa
gccccatcttttccagtggactggaagactgtggagctgcctctcaatgacacctttcag
ccttgcattgcagccatcactagtccttccctcttctacctgctcgttcccaaccaggtg
gaccagcaaaagcttcaggaggtgatgatggagctggttgcctattgcggcaacattcgt
gcttctttatcctccactgtcctaagcagaccagttcctggggctgcctgctgtgcccag
ttttctgctgacaataactggtaccgtgcagtggtcctggaggtcggtgagaatgagatg
agtgtcatctatgcagattacggcaacagtgagaaggtgccattctcccgtgtcttgccc
atcaccaagcacctgctgcagcttccctttcagatcactcgctgcaccctcactggtaag
gaacacttcccttcagagttcccagaggaagtgctgcagatgtttcaaagccagttgttg
aacggcgtcctcgccactgtccagtccttcagtgactctgttaatgtgctatcactcact
cttcccactgagaggggaggggggaacctcagcaccatgatcttggatacactacagcac
caggccagtagtaatccttgctcacctaccgtccggaaggctgaccaaactgacagcagc
acatctactgccagcactacagttgttcctgactgccctcagcccattgtcacaccggaa
accccgaaggggctgaaacatacaaccgctaccaccggcacaaccataatcccagagcag
gaaccccagactacccagctgaaaacaaacacctctgctgaagatcccgcacagaagatt
gttgcgcaaatggagcctttatgcaaaattgatcctcaggcctctggctgctgctgtcaa
aacctgatgactaagattgaccacctggaacatttggtgcagctgcagctttctctcata
aagcagttagtgggacagacaaaataa
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