Etheostoma cragini (Arkansas darter): 117937275
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Entry
117937275 CDS
T07493
Name
(RefSeq) integrin alpha-X-like
KO
K06461
integrin alpha M
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04145
Phagosome
ecra04514
Cell adhesion molecules
ecra04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
117937275
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
117937275
09142 Cell motility
04810 Regulation of actin cytoskeleton
117937275
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ecra04131
]
117937275
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ecra04147
]
117937275
04515 Cell adhesion molecules [BR:
ecra04515
]
117937275
04090 CD molecules [BR:
ecra04090
]
117937275
00536 Glycosaminoglycan binding proteins [BR:
ecra00536
]
117937275
Membrane trafficking [BR:
ecra04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
117937275
Exosome [BR:
ecra04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
117937275
Cell adhesion molecules [BR:
ecra04515
]
Integrins
Integrin alpha subunits
117937275
CD molecules [BR:
ecra04090
]
Proteins
117937275
Glycosaminoglycan binding proteins [BR:
ecra00536
]
Heparan sulfate / Heparin
Adhesion molecules of cell surface
117937275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
ITGAX-like_Ig_3
FG-GAP
Integrin_A_Ig_2
VWA_2
Integrin_A_Ig_1
Motif
Other DBs
NCBI-GeneID:
117937275
NCBI-ProteinID:
XP_034716994
LinkDB
All DBs
Position
21:10788002..10821228
Genome browser
AA seq
1133 aa
AA seq
DB search
MDWIITTTIFSSVLQAALCFNIDPVGWKVLTNPAAGFGYQVVQRQSDLLVSAPLAQFSEK
GRGQIYKCSTESCNELLVPLPDFAVNSSLGLTMTSDPSAQNTLACGPTIPKDCKSITMYS
GICLQIDSSNSIVNSMPSSNKECRSADIAFLLDGSGSVSRLDFNTMKTFVKDLVRSLLSL
DTKFAVAQFSSIPNVHFYFDDFFSGTGSWEDKVDRISQQGGTTYTAAAIKYVVEQIFIPT
KGSRSNVKKVLIVITDGASHDRDQLRSAADLAEKQQIVRFAIGVGGAFRDPDAKNELNTI
ASFPKENQVFQVENFAALEKIRESLQAKLFAIEGSQSGESLKMEMAQEGFSAVFLPQGFQ
MGIVGANEWMGGYLPFTSRGQALRPFTPLIANASYLGYSMAVANTLQGPLTIIGAPRHQH
RGAVMVVFQNINQKTIDPFPWQYQSGEYFGAVVCAMDVDRNSYTDLILISAPMFIDTDRE
GRVYVCSLSFLNVECHLDDSPSILRGDASQKGRFGSSLAVLPDLNTDGFSELAVGAPLEN
GGQGSIYIFHGEAGGRINSAYSQRIAGSEVRSGLKFFGMSISQSSFDHSSDNLPDLAVGS
KGAVVLLRSKPIVMVEATVSFSPNQISTQNSDCTKALETTADICFTMTRHSSLQQAKAMI
NYTLTLDANRKNSRAYIVVKQREVTGTVSLHLQKPECAKVKFFVEACPEDALNVLSNVLR
FTFDGLPSDQNLRPSLALQAQTASFHPLGFEINCGTDNKCVDDLKVDFNFTRASEVKVGI
DELLDVTVSVDNSEENSYNSHVILTYPVGLSYRKFAILQGRIECNSLDSEDGLTRGKTDC
TVDKPIFKSNTKAFFIVSYGIPTNSKLDRTIYVTANATSGNQEHSSSSVLYKKKEIDVKY
SIFATIESSLSYTNFSFGKNNLQKPFQQSIVVTNDIRAVNFTVVIKVPLKLGDKDIWVDS
SNLRIPDCQRDKDEEPKQTDFVAMVQKTKVVDCSVARCSVFKCSRFMGRLESKIYQISAN
ISSGWIEQIGLRKAKFVLTSTGSLEYDRTQFIFFSIGSNNNTLVKKIGAEVEVYPEPNFT
KEIVGGSLGGLALLALLTAGLYKAGFFKSKYKEMINNDEADPEADGDPSTPVE
NT seq
3402 nt
NT seq
+upstream
nt +downstream
nt
atggactggattattactacaacaatattctcgtcagtgttacaagctgcactttgtttt
aatattgatcctgtgggttggaaggtcctgactaaccctgctgcaggttttggataccag
gtggtgcagagacaatcagacttgctggtcagtgctcctcttgcacagttttcagaaaaa
ggacgggggcaaatttataaatgctccaccgaatcctgcaatgaactattagttccattg
ccagactttgcagtcaactcgtctcttggtttgacaatgacaagtgatccctctgcacaa
aacactttggcatgtggtccaaccatcccgaaggactgcaaaagtatcaccatgtacagc
gggatatgcttgcagatagacagttctaacagcattgtaaactctatgccttcttctaat
aaagagtgccgatcagctgacatagcatttctgttggatggttctggcagtgtatccagg
ctggattttaacacaatgaagacttttgtgaaagatctggtccgctcactcctgtcgcta
gacacaaagtttgctgttgcccagttctccagcatacccaatgtccatttttactttgat
gattttttctctggaactggatcatgggaagataaagttgatcgcattagtcaacaaggg
ggaacaacttacacagctgcagccatcaaatatgtagtagaacagattttcataccaaca
aagggttccaggtcaaatgtgaagaaggtcttgatagtcattaccgatggagcatcacac
gacagggatcaattgagatctgctgcagacttagctgagaagcaacaaattgttcgattt
gcaattggagtggggggtgcatttagggatccggatgcaaaaaatgaactcaacaccatt
gcatcgtttcccaaagaaaatcaagtgtttcaagtggagaactttgcagcacttgaaaaa
ataagggagagcttacaggccaagctctttgctattgaaggatcgcaaagtggagagtca
cttaaaatggaaatggctcaagagggattcagtgcagtttttttgcctcagggatttcag
atgggcattgtcggtgctaatgagtggatgggaggctacctgccatttacaagcagaggc
caagcgttgagaccctttacgcctcttatagctaatgccagttatctgggttactccatg
gcagtcgcaaatacgctccaaggcccattgacaattattggcgctccaagacatcaacac
cgaggagctgtgatggtagtttttcaaaacataaatcagaaaacgattgatccctttcca
tggcagtatcagagcggtgaatatttcggagctgttgtttgtgcgatggacgtggatcgc
aacagctacactgacctgatccttatatccgccccgatgtttatcgacactgacagagaa
ggaagagtttacgtttgcagcttaagttttttgaacgttgagtgtcacttagatgattct
ccgtcaatattaagaggagatgcatctcaaaaaggaaggtttgggtcttctcttgctgtt
ctgcctgatctgaacacggatggtttcagtgagctggcggttggagcgccgttggagaat
ggcggccaaggcagcatctacatattccacggcgaagcaggaggaagaatcaattctgct
tactcacagagaattgctggctctgaagtccggtcaggactaaagttctttggcatgtcg
atcagtcagtcatcttttgaccatagcagtgacaatctgcctgacttagctgttggttca
aagggtgctgttgtcctactcagatcaaagcctatagtaatggtagaagctacggtgtca
ttcagcccaaaccaaatttctactcaaaactcagactgcacaaaagctttggagaccaca
gctgatatctgctttactatgaccagacactcctctttgcaacaagctaaagcaatgatt
aactatacattgactctggatgccaaccgcaaaaacagccgagcttacattgttgtgaaa
caacgagaggtgactggcacagtcagtcttcatttacaaaagcctgaatgcgccaaggtg
aaattctttgttgaggcctgtccagaagatgccctcaatgtactttccaatgtactcaga
ttcacctttgacggcttgccttccgaccaaaatctccgtccgagtctcgccctgcaggcg
cagacagcaagctttcatcctttaggatttgaaattaactgcggcacggacaacaagtgt
gtagatgacctgaaagtggatttcaactttaccagagcctcagaagttaaagtgggcatt
gatgaattgctggatgtcaccgtctcggtggataacagcgaggaaaactcctacaacagt
catgttattctcacatacccagttggcctctcctataggaagtttgcaattctgcaggga
agaattgagtgcaactccttggacagtgaagatggcttaacacgaggaaagacagactgc
actgttgacaagcctatttttaagagcaatactaaggctttcttcattgtctcctatggg
atccccaccaatagtaaacttgacaggacgatttatgtcactgccaatgctaccagtggg
aatcaggagcactctagttcaagcgtgctctacaaaaagaaagagattgatgtgaagtat
agcatttttgccacaattgaaagttccctcagctacaccaatttctctttcggaaagaat
aatttgcagaaaccatttcaacaatcaattgtggtaacaaatgatatcagagcagtaaat
ttcactgtggtgataaaggtgccattgaagctcggtgataaagacatctgggtggattca
agcaatttgcggattccagactgccaacgagacaaagatgaagaacctaaacaaacagat
tttgttgctatggtacagaaaactaaggtagtggactgctctgtagccaggtgcagtgtg
ttcaagtgtagtaggttcatgggaagactagagagtaaaatataccaaatctcggccaac
atcagttctggatggatagagcagattggacttcgtaaagccaaattcgtcctgaccagc
acaggcagtctggagtatgacagaacccagttcatcttcttttcaatagggtctaataac
aacactctggttaaaaagattggagcagaggtcgaagtatatcctgaaccaaacttcact
aaagagattgtcggaggatccctgggaggcttggctctactggctttactcaccgctggc
ctgtacaaggctggatttttcaagagtaaatacaaggagatgattaacaacgatgaagca
gatccagaggctgatggagacccaagtacaccagtagaataa
DBGET
integrated database retrieval system
