Etheostoma cragini (Arkansas darter): 117937319
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Entry
117937319 CDS
T07493
Name
(RefSeq) DDB1- and CUL4-associated factor 7-like
KO
K11805
DDB1- and CUL4-associated factor 7
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
117937319
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ecra04121
]
117937319
03036 Chromosome and associated proteins [BR:
ecra03036
]
117937319
Ubiquitin system [BR:
ecra04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
117937319
Chromosome and associated proteins [BR:
ecra03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.3/1.5)
117937319
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR5
WD40_CDC20-Fz
Beta-prop_EIPR1
WD40_Prp19
Beta-prop_WDR3_1st
Beta-prop_RIG_2nd
WD40
Beta-prop_Aladin
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR3_2nd
MIOS_WD40
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
WD40_RFWD3
WD40_Gbeta
EIF3I
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_1st
WDR55
Beta-prop_WDR41
WD40_MABP1-WDR62_2nd
Beta-prop_EML
WD_LRWD1
Reductase_C
Motif
Other DBs
NCBI-GeneID:
117937319
NCBI-ProteinID:
XP_034717090
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All DBs
Position
21:complement(10365152..10374282)
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AA seq
342 aa
AA seq
DB search
MSLHGKRKEIYKYEAPWTVYAMNWSVRPDKRFRLALGSFVEEYNNKVQIVGLEEENSEFV
CRNTFDHPYPTTKVMWIPDSKGAYPDLLATSGDYLRIWRVGETETRLECLLNNNKNSDFC
APLTSFDWNEVDPNLLGTSSIDTTCTIWGLETGQVLGRVNLVSGHVKTQLIAHDKEVYDI
SFSRAGGGRDMFASVGADGSVRMFDLRHLEHSTIIYEDPQHHPLLRLCWNKQDPNYLVTM
AMDSMEVVILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAAEDHQALIWDIQQMP
RAIEDPILAYTAEGEINNVQWATTQPDWIAICYNNCLEILRV
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctacacggtaaacgtaaggaaatctacaaatacgaggcgccgtggacagtttac
gccatgaactggagtgtccggccggacaaacggttccgcttggcgctcggtagctttgtg
gaggagtacaataacaaggttcagatagttggtttggaggaggagaactctgagtttgtg
tgtcgaaacaccttcgaccatccctaccccaccaccaaggtcatgtggattcccgacagc
aaaggagcgtatcctgacctgcttgccaccagcggagactacctgagaatctggagggtg
ggcgaaacagagacccgactggagtgcctgctaaacaataacaagaactctgacttctgt
gcaccactcacatcctttgactggaacgaggtggacccaaacttgctaggtacttccagt
attgacactacctgtacgatctggggactggagactggacaggtgctgggcagggtcaac
ttagtgtctggtcatgtcaagacgcagctcattgcccatgacaaagaggtgtatgacatc
tctttcagccgagcgggtggaggcagggatatgtttgcctcggtgggagcggacggctcg
gttcgcatgtttgacctgcgtcatcttgaacacagcactatcatctatgaagacccgcag
caccacccactgctccggctctgctggaacaagcaggaccccaactaccttgtcaccatg
gcgatggacagcatggaggtggtgatcttagacgtgcgtgtgccctgtactccggtggcc
agactcaacaaccacagggcctgtgtcaatggaatcgcctgggcgccgcattcctcctgt
cacatctgcacagcagcggaggaccaccaggctctaatctgggacatccagcagatgccg
cgggccattgaggaccctatactggcctacacagccgagggagagatcaataatgtccag
tgggccaccacccagcccgactggattgctatctgctacaacaactgcctggaaatcctc
agagtctga
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