Etheostoma cragini (Arkansas darter): 117937378
Help
Entry
117937378 CDS
T07493
Symbol
itgb4
Name
(RefSeq) integrin beta-4 isoform X1
KO
K06525
integrin beta 4
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04510
Focal adhesion
ecra04512
ECM-receptor interaction
ecra04810
Regulation of actin cytoskeleton
ecra04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
117937378 (itgb4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
117937378 (itgb4)
09142 Cell motility
04820 Cytoskeleton in muscle cells
117937378 (itgb4)
04810 Regulation of actin cytoskeleton
117937378 (itgb4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ecra04147
]
117937378 (itgb4)
04515 Cell adhesion molecules [BR:
ecra04515
]
117937378 (itgb4)
04090 CD molecules [BR:
ecra04090
]
117937378 (itgb4)
Exosome [BR:
ecra04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
117937378 (itgb4)
Exosomal proteins of bladder cancer cells
117937378 (itgb4)
Cell adhesion molecules [BR:
ecra04515
]
Integrins
Integrin beta subunits
117937378 (itgb4)
CD molecules [BR:
ecra04090
]
Proteins
117937378 (itgb4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
fn3
Calx-beta
Integrin_B_tail
Pur_ac_phosph_N
PSI_integrin
I-EGF_1
EGF_2
SEA
Motif
Other DBs
NCBI-GeneID:
117937378
NCBI-ProteinID:
XP_034717184
LinkDB
All DBs
Position
21:19201483..19233153
Genome browser
AA seq
1940 aa
AA seq
DB search
MGRWTLHLSVGLGILAVMLTCCYTEENYCFASRAKTCSECLQSGKGCAYCSDETFNGPRC
DLYQNIIHYGCSAAAVITAESSMMIEKEQAINIRLQQSQVSPQQVSMSFLPGEEKLMDVQ
VFAPTKGPLDLYILMDFSNSMADDLNNLKSMGKELATLVKQLSDDYTIGFGKFVDKVIEP
QTDMRPAKLEKPWPDSDPPFSFKNVIKLTSDSDAFNRDLQKEKISGNLDAPEGGFDAILQ
AAVCGDKIGWRAHSTHLLVFSTESAFHYEADGANVLAGILQRNDELCHLNADGKYTQDIN
QDYPSIPTLVRLLGKHNIIPIFAVTNHSYTHYEKLKEYFPIAEVGLLQEDSSNILQLMDD
AFKNIRSKISIRAEDRPKAFETQFLTTSGSVAQYGAFDFQPGAIGKFQMRLKAQRMINEQ
PVCQMDSDEKQGTMRVKPTTFSNAVNVKASVLCPTCDCEKTVIPRAPRCHGNGDLVCGKC
QCYAGWVSTFCNCSVSTSAKDTSQCIEPGMSEPCSGRGDCLECGTCVCYNPEQFEGPYCQ
WDKTQCQRYGGFLCSDRGSCSMGRCVCPEGWEGSACECSKSNQTCLDSKGGVCNGQGKCV
CGRCECTESAIDLTSTCEPNFQAQLGVCEGTRSCVQCQAWKTGEKKEKEECDKCPFKITL
VDELKEREKVLDSCSFRDEDDDCTYYYTVENPKDPLVKVLEVQVLEKKECPPASLLWLLP
LFLFLLLLLALLLLCCWKYCACCKTLCQSCLALLPCCGRGRMVGFKEDEYLLRQSLLTSD
HLDTPMVRTGPPKGTDVVRWKVTDNVHRSPNHPQALIKPNPKESIQFPISLRLNRLFSEN
LSRPDSRDAEQLRKEVADNLNEVYKQIPGAQKVQKTAFRMQRNAGKRQDYAIMDTVLSAP
RSSYPDIVKLTEKTVQSGNAHDLKVVPGYYTVATDREAAGAIEFQEGVESVDVHVPLFVK
DEDDEKKQLLVEAIDVPMGIAEIGKRLVNITIIKEHATNIFSFLQPAYTYSRQDGVANIP
ISREIIEDGRTQVTYRTRDLTAKDKKDYVAVEGDLSYAPGETQKIVPVRLLELGEKDGLL
EDKQVKQFVMDLSNPREGAKLGRYPRTTITIADQPEPSIMMFKKGTQNFTTSDPTYVIPV
VRTRNQDSPASVKWRTKKAQRFDLAGTLKFSPGETEKNIVIDPRAHNSPIQPETIQLELL
DPSSNASVGDRKTTLVNITDGAPEVAQVQQKGYTNLNLNSPGGHLPSPSNLKAKATGPRS
IRLNWDPLSGNTMGYKVKYWIYGDPEKDAQVLDVKTPQAELTNLYPYCDYEMRVCGYNAV
GDGYDTDMVACQTLEDVPGEPGRLAFNVISPTVTQVSWAEPAETNGNITAYEVIYTPIDD
GRKPVGPAKKVKIDNPKKRMLLIENLQNAQTYQYKVRAMNSIGWGPFKDATINLASQPVR
PLSIPIIPDIPIVDAEAGEEYDSYLMYSNEVLKSPTGSKTPSVSGDDYMINGKWEQNFLF
PGGSATRNLSASSSPMSTLSSNYRGAGGSFTTETSTTYMSGAAGSRRHDMIGGGVHSSEV
IMRKRSENRGYTDENIRDSIVIGDVSSKFPDLGGFGYAGIQSSSQSQFSYNLSQGSRARI
ESSDVNEALYNLDRVLLDARLSPGVPDTPSRLVFSALGPTALKVSWQEPHCEKDILGYCV
LYQLLSGGEMKRINVTNPAENSVIIQDLLPNHSYLFKVKGQSQEGWGPEREGVITIESAV
DPKSPLSPMPGSPFTLSTPSAPGPLVFTALSPDSLQLSWEKPRKPNGDILGYVVTCEQLH
GGGDLRTFQVNGDSAETSLTVPNLTENIPYKFKVQARTTQGFGPEREGIITIESQDGSAL
SQYNSQSTRREVFHMPTEVSTRTNVSHTMLNDPYFSADGMMMTTQHSETSGMVTRHVTKE
VVQRSVMGGTTVTKKMFYES
NT seq
5823 nt
NT seq
+upstream
nt +downstream
nt
atggggagatggacgttacatctctcagtggggcttgggattctagccgtgatgttaacc
tgctgttatactgaagagaactactgctttgcttccagggccaagacctgttcagaatgc
ctgcagtcggggaaaggctgtgcgtactgctctgatgagacctttaatggccctcgttgt
gacctgtaccagaatataattcactatggctgcagtgctgcagctgtaatcacagctgaa
agcagtatgatgatagaaaaggagcaagcaatcaacattagacttcagcagtctcaagtg
tctccacagcaggtgagcatgagctttctcccaggagaggagaagctgatggatgtgcaa
gtgtttgctccaaccaaaggacctcttgacctctatattcttatggacttctccaactcc
atggctgatgatttgaacaacttgaagagcatgggcaaagagctggctacattggttaag
cagctgtcagatgactacaccattgggtttggaaagtttgtggacaaagtgattgagcct
cagacggacatgagacccgccaaacttgagaagccgtggcctgacagcgaccctcctttc
tcttttaaaaacgtcatcaagctgaccagcgactcggatgccttcaacagggacctccag
aaggagaaaatatctggcaacctggatgctcctgaaggaggttttgatgccatattgcag
gctgcagtttgtggggataagatcggctggcgtgcccacagcacccatcttctggttttc
tccaccgagtcagccttccactatgaggctgatggggctaacgtgctggcaggtatcctg
cagcgcaacgacgagctctgccacctgaacgcagacggcaaatacacacaggatataaac
caggattacccctcaatacccacgctggttcgtctgctgggcaaacacaatatcatccca
atctttgctgtcaccaaccactcctacacgcactatgagaaattaaaagagtacttcccc
attgctgaagttggtctgttgcaagaagactcttccaatattctgcaactcatggacgat
gccttcaagaatatccgttctaagataagcatccgagcagaggacagacccaaggcattc
gagacacagttcttgaccaccagtggaagcgtcgcacagtatggagcctttgatttccaa
cccggagcaataggcaagtttcagatgcggcttaaagcccagcgaatgatcaatgagcag
cctgtctgtcagatggattcagatgaaaaacaggggacaatgagagtcaaacctacaacc
tttagcaatgccgtcaatgttaaagcctcggttttgtgtccaacctgcgactgtgaaaag
actgtcatccctagagcacccaggtgccatggcaatggagacctggtgtgtgggaagtgt
cagtgctatgctggctgggtaagtacattctgtaactgctcagtaagcacttcagctaag
gataccagccagtgtatagaaccaggcatgtcggagccttgttcaggccgtggggactgc
ctggagtgtggaacctgtgtgtgctacaacccggaacagtttgaaggaccatactgtcag
tgggacaagacgcagtgtcaaagatatggaggcttcctctgcagtgaccgtggctcttgc
agtatgggtcgctgtgtgtgtcctgagggctgggagggcagtgcctgtgagtgttccaag
agcaaccaaacctgtctggacagcaaaggcggtgtctgcaatgggcaaggtaaatgtgta
tgcggccgctgtgagtgtacggagtctgctattgatctgacttccacatgtgagccaaat
ttccaggcccagttgggtgtgtgtgagggtacgaggagttgcgtccagtgtcaggcctgg
aagacaggagagaagaaagagaaagaggagtgtgacaagtgtccctttaaaattaccttg
gtggatgaacttaaagaacgggagaaggtgcttgattcgtgcagtttccgggatgaggat
gatgactgtacgtactactacactgttgaaaaccctaaagatcccttagttaaggtcttg
gaggtccaggtgctcgaaaagaaagaatgtccccctgctagcctactgtggttgctccca
ctcttcttgttcctcttgttactgctggccctgttgctgctctgctgctggaaatactgt
gcctgctgcaaaaccctctgccagagctgtcttgccctgctgccttgctgtgggagaggt
cgtatggttggcttcaaggaagatgagtatttgctccgccagtctctgcttacctcagac
catctggacaccccaatggtaaggaccggccctcccaaaggaaccgatgtggtccgctgg
aaggtcactgataacgtacaccgatcacccaatcacccccaggctctgataaagcccaac
cctaaagagtccatccagttcccgatctccctccgactaaacaggctgttttctgagaac
ctgtctcgccccgattccagagacgcagaacagcttcgcaaggaagtggccgataacctg
aatgaggtgtacaagcagattcccggcgcccagaaagtgcaaaaaactgcattcagaatg
cagagaaatgccggaaaaaggcaggactacgccattatggacaccgtcttatccgctcct
cgcagcagctaccctgatattgtcaaactcaccgagaaaactgtccagtctggaaacgca
catgatctcaaagtggtgcccggctattacactgtggccaccgacagagaggctgcagga
gccatcgagttccaagaaggtgtggagtcagtagacgttcatgtgccgctctttgtcaag
gatgaagacgatgaaaagaagcagctgctggtggaggccatagatgtgccaatggggatt
gctgagattggaaaacgtttggtcaacatcaccatcatcaaagagcatgccaccaatatc
ttctcgttcctccagccggcctacacctacagcaggcaggacggagtggccaacattccc
attagcagagagatcatagaagatggacgcacacaggtcacctaccgcacacgggacctc
acagccaaggataagaaggactatgttgctgtggaaggagacttgagctacgctccaggt
gagacccagaaaatagtgcctgttcgtctgctggagctgggcgagaaagatggcctcctt
gaagacaaacaggtcaagcagtttgtcatggatctcagtaacccacgggaaggtgccaag
ctgggacgctacccgagaactactatcacaattgcggaccaaccagagcccagtattatg
atgttcaaaaagggcacccagaactttaccacatctgacccaacctacgttatccctgtg
gtccgcactcgcaaccaggacagtcccgcctcagtgaaatggcgcaccaagaaggcccag
cgctttgacttagccggcactttaaagtttagtcccggggagacggagaagaacatagtg
atcgacccgagggctcacaatagcccaatccagccagagaccatacaactggagctgttg
gacccaagtagcaatgcttctgttggggacagaaagaccacccttgtcaatataactgac
ggagctccagaagttgcccaggtgcagcagaagggctacacaaacctgaatctcaactca
cctggtggtcatcttccctctccaagcaaccttaaggccaaagcaactggacccagaagc
attcgcctcaactgggacccactgtctggtaacacaatggggtacaaggtaaagtattgg
atctatggcgacccagagaaagatgcccaggtcttagatgtgaagactcctcaagctgag
ttgaccaacttgtacccctattgtgattacgagatgcgagtgtgcggctacaatgcggtg
ggagatggatacgacacagacatggttgcctgtcaaacactggaggatgtgcctggtgaa
cctgggcgtcttgcctttaatgtcatcagcccgactgtcactcaggtcagctgggcagag
cctgcagagaccaatggcaacatcacggcttatgaggtcatctacacacccattgatgat
ggaaggaagccagtgggccccgctaagaaagtaaagattgacaaccccaagaagcgaatg
ctgttgatcgagaaccttcagaatgcccagacctaccagtacaaggtccgtgccatgaac
agcataggctggggccccttcaaagatgccaccataaacctggcatcccagcctgtcaga
cctctatccattcccatcattccagatatccccattgtggatgcagaggcaggagaagag
tatgacagctacctgatgtacagcaatgaggtgctgaagtcccctacaggctccaagacg
cccagcgtctctggtgatgattacatgatcaatgggaagtgggaacagaacttccttttc
ccagggggatcagcaacacgcaacttgtcagcatcatcctctcctatgtccactctgagc
tccaactacagaggggcaggcggctcctttaccacagaaacatccaccacctacatgtcc
ggagcagcaggctctcgtagacatgacatgataggaggaggagtacactcatcagaagtt
atcatgaggaagcgctcagagaacaggggttacacagatgaaaacatccgggactcaatc
gtcattggagatgtgtcaagcaagttcccagatttaggtgggttcggctacgctgggata
cagagcagctctcagagccagttcagctacaacctgtctcagggttccagggccaggatt
gagtcttcagacgtcaatgaagccctatataatctggatagggtgctcctggatgctcga
ctgtctccgggcgtaccagacacccccagcagactggtgttttctgctcttggtcccact
gccctcaaagtgagctggcaggagccccactgtgagaaagacatcctgggctactgtgtt
ctctaccagctgctcagtggaggagagatgaagcgtatcaatgtgacgaacccagcagag
aactctgttatcatccaggacctgctgcccaaccactcctatctatttaaagtgaagggt
cagagccaggagggctggggtccagagagagagggagtcatcaccatcgagtcggcagtg
gaccccaagagtcccctcagccccatgccaggctcaccatttactctgagcactcccagt
gccccgggccccctggtctttaccgctctaagccccgactccctacagctcagctgggag
aaaccccgtaaacccaacggagacatcctgggctatgtagtcacctgcgaacagctgcat
ggtggaggagacctgcgtaccttccaggtgaacggggacagtgctgagaccagtttgacc
gttccaaacctgacggagaatattccctacaagtttaaagttcaggctcgaactacacag
ggcttcggccccgagagggagggcatcatcaccattgagtctcaggatggaagcgctttg
tctcagtacaacagccaatcaacgaggagggaagttttccacatgccaacagaggtcagc
acgcggaccaacgtctcccacaccatgctcaacgacccctacttctcagcagatgggatg
atgatgaccacgcagcactcagagaccagcggcatggtgacccgtcacgtcaccaaggaa
gtggttcagaggagcgtcatgggaggaaccaccgtcacaaagaagatgttttacgaatct
taa
DBGET
integrated database retrieval system
