Etheostoma cragini (Arkansas darter): 117937378
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Entry
117937378 CDS
T07493
Symbol
itgb4
Name
(RefSeq) integrin beta-4 isoform X1
KO
K06525
integrin beta 4
Organism
ecra
Etheostoma cragini (Arkansas darter)
Pathway
ecra04382
Cornified envelope formation
ecra04510
Focal adhesion
ecra04512
ECM-receptor interaction
ecra04518
Integrin signaling
ecra04810
Regulation of actin cytoskeleton
ecra04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
117937378 (itgb4)
04518 Integrin signaling
117937378 (itgb4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
117937378 (itgb4)
09142 Cell motility
04820 Cytoskeleton in muscle cells
117937378 (itgb4)
04810 Regulation of actin cytoskeleton
117937378 (itgb4)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
117937378 (itgb4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ecra04147
]
117937378 (itgb4)
04515 Cell adhesion molecules [BR:
ecra04515
]
117937378 (itgb4)
04090 CD molecules [BR:
ecra04090
]
117937378 (itgb4)
Exosome [BR:
ecra04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
117937378 (itgb4)
Exosomal proteins of bladder cancer cells
117937378 (itgb4)
Cell adhesion molecules [BR:
ecra04515
]
Integrins
Integrin beta subunits
117937378 (itgb4)
CD molecules [BR:
ecra04090
]
Proteins
117937378 (itgb4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_beta
fn3
Calx-beta
Integrin_B_tail
Pur_ac_phosph_N
PSI_integrin
I-EGF_1
FN3_DSCAM-DSCAML_C
EGF_integrin
EGF_Teneurin
EGF_TEN
EGF_2
vWA_SIBA-E
SEA
Motif
Other DBs
NCBI-GeneID:
117937378
NCBI-ProteinID:
XP_034717184
LinkDB
All DBs
Position
21:19201483..19233153
Genome browser
AA seq
1940 aa
AA seq
DB search
MGRWTLHLSVGLGILAVMLTCCYTEENYCFASRAKTCSECLQSGKGCAYCSDETFNGPRC
DLYQNIIHYGCSAAAVITAESSMMIEKEQAINIRLQQSQVSPQQVSMSFLPGEEKLMDVQ
VFAPTKGPLDLYILMDFSNSMADDLNNLKSMGKELATLVKQLSDDYTIGFGKFVDKVIEP
QTDMRPAKLEKPWPDSDPPFSFKNVIKLTSDSDAFNRDLQKEKISGNLDAPEGGFDAILQ
AAVCGDKIGWRAHSTHLLVFSTESAFHYEADGANVLAGILQRNDELCHLNADGKYTQDIN
QDYPSIPTLVRLLGKHNIIPIFAVTNHSYTHYEKLKEYFPIAEVGLLQEDSSNILQLMDD
AFKNIRSKISIRAEDRPKAFETQFLTTSGSVAQYGAFDFQPGAIGKFQMRLKAQRMINEQ
PVCQMDSDEKQGTMRVKPTTFSNAVNVKASVLCPTCDCEKTVIPRAPRCHGNGDLVCGKC
QCYAGWVSTFCNCSVSTSAKDTSQCIEPGMSEPCSGRGDCLECGTCVCYNPEQFEGPYCQ
WDKTQCQRYGGFLCSDRGSCSMGRCVCPEGWEGSACECSKSNQTCLDSKGGVCNGQGKCV
CGRCECTESAIDLTSTCEPNFQAQLGVCEGTRSCVQCQAWKTGEKKEKEECDKCPFKITL
VDELKEREKVLDSCSFRDEDDDCTYYYTVENPKDPLVKVLEVQVLEKKECPPASLLWLLP
LFLFLLLLLALLLLCCWKYCACCKTLCQSCLALLPCCGRGRMVGFKEDEYLLRQSLLTSD
HLDTPMVRTGPPKGTDVVRWKVTDNVHRSPNHPQALIKPNPKESIQFPISLRLNRLFSEN
LSRPDSRDAEQLRKEVADNLNEVYKQIPGAQKVQKTAFRMQRNAGKRQDYAIMDTVLSAP
RSSYPDIVKLTEKTVQSGNAHDLKVVPGYYTVATDREAAGAIEFQEGVESVDVHVPLFVK
DEDDEKKQLLVEAIDVPMGIAEIGKRLVNITIIKEHATNIFSFLQPAYTYSRQDGVANIP
ISREIIEDGRTQVTYRTRDLTAKDKKDYVAVEGDLSYAPGETQKIVPVRLLELGEKDGLL
EDKQVKQFVMDLSNPREGAKLGRYPRTTITIADQPEPSIMMFKKGTQNFTTSDPTYVIPV
VRTRNQDSPASVKWRTKKAQRFDLAGTLKFSPGETEKNIVIDPRAHNSPIQPETIQLELL
DPSSNASVGDRKTTLVNITDGAPEVAQVQQKGYTNLNLNSPGGHLPSPSNLKAKATGPRS
IRLNWDPLSGNTMGYKVKYWIYGDPEKDAQVLDVKTPQAELTNLYPYCDYEMRVCGYNAV
GDGYDTDMVACQTLEDVPGEPGRLAFNVISPTVTQVSWAEPAETNGNITAYEVIYTPIDD
GRKPVGPAKKVKIDNPKKRMLLIENLQNAQTYQYKVRAMNSIGWGPFKDATINLASQPVR
PLSIPIIPDIPIVDAEAGEEYDSYLMYSNEVLKSPTGSKTPSVSGDDYMINGKWEQNFLF
PGGSATRNLSASSSPMSTLSSNYRGAGGSFTTETSTTYMSGAAGSRRHDMIGGGVHSSEV
IMRKRSENRGYTDENIRDSIVIGDVSSKFPDLGGFGYAGIQSSSQSQFSYNLSQGSRARI
ESSDVNEALYNLDRVLLDARLSPGVPDTPSRLVFSALGPTALKVSWQEPHCEKDILGYCV
LYQLLSGGEMKRINVTNPAENSVIIQDLLPNHSYLFKVKGQSQEGWGPEREGVITIESAV
DPKSPLSPMPGSPFTLSTPSAPGPLVFTALSPDSLQLSWEKPRKPNGDILGYVVTCEQLH
GGGDLRTFQVNGDSAETSLTVPNLTENIPYKFKVQARTTQGFGPEREGIITIESQDGSAL
SQYNSQSTRREVFHMPTEVSTRTNVSHTMLNDPYFSADGMMMTTQHSETSGMVTRHVTKE
VVQRSVMGGTTVTKKMFYES
NT seq
5823 nt
NT seq
+upstream
nt +downstream
nt
atggggagatggacgttacatctctcagtggggcttgggattctagccgtgatgttaacc
tgctgttatactgaagagaactactgctttgcttccagggccaagacctgttcagaatgc
ctgcagtcggggaaaggctgtgcgtactgctctgatgagacctttaatggccctcgttgt
gacctgtaccagaatataattcactatggctgcagtgctgcagctgtaatcacagctgaa
agcagtatgatgatagaaaaggagcaagcaatcaacattagacttcagcagtctcaagtg
tctccacagcaggtgagcatgagctttctcccaggagaggagaagctgatggatgtgcaa
gtgtttgctccaaccaaaggacctcttgacctctatattcttatggacttctccaactcc
atggctgatgatttgaacaacttgaagagcatgggcaaagagctggctacattggttaag
cagctgtcagatgactacaccattgggtttggaaagtttgtggacaaagtgattgagcct
cagacggacatgagacccgccaaacttgagaagccgtggcctgacagcgaccctcctttc
tcttttaaaaacgtcatcaagctgaccagcgactcggatgccttcaacagggacctccag
aaggagaaaatatctggcaacctggatgctcctgaaggaggttttgatgccatattgcag
gctgcagtttgtggggataagatcggctggcgtgcccacagcacccatcttctggttttc
tccaccgagtcagccttccactatgaggctgatggggctaacgtgctggcaggtatcctg
cagcgcaacgacgagctctgccacctgaacgcagacggcaaatacacacaggatataaac
caggattacccctcaatacccacgctggttcgtctgctgggcaaacacaatatcatccca
atctttgctgtcaccaaccactcctacacgcactatgagaaattaaaagagtacttcccc
attgctgaagttggtctgttgcaagaagactcttccaatattctgcaactcatggacgat
gccttcaagaatatccgttctaagataagcatccgagcagaggacagacccaaggcattc
gagacacagttcttgaccaccagtggaagcgtcgcacagtatggagcctttgatttccaa
cccggagcaataggcaagtttcagatgcggcttaaagcccagcgaatgatcaatgagcag
cctgtctgtcagatggattcagatgaaaaacaggggacaatgagagtcaaacctacaacc
tttagcaatgccgtcaatgttaaagcctcggttttgtgtccaacctgcgactgtgaaaag
actgtcatccctagagcacccaggtgccatggcaatggagacctggtgtgtgggaagtgt
cagtgctatgctggctgggtaagtacattctgtaactgctcagtaagcacttcagctaag
gataccagccagtgtatagaaccaggcatgtcggagccttgttcaggccgtggggactgc
ctggagtgtggaacctgtgtgtgctacaacccggaacagtttgaaggaccatactgtcag
tgggacaagacgcagtgtcaaagatatggaggcttcctctgcagtgaccgtggctcttgc
agtatgggtcgctgtgtgtgtcctgagggctgggagggcagtgcctgtgagtgttccaag
agcaaccaaacctgtctggacagcaaaggcggtgtctgcaatgggcaaggtaaatgtgta
tgcggccgctgtgagtgtacggagtctgctattgatctgacttccacatgtgagccaaat
ttccaggcccagttgggtgtgtgtgagggtacgaggagttgcgtccagtgtcaggcctgg
aagacaggagagaagaaagagaaagaggagtgtgacaagtgtccctttaaaattaccttg
gtggatgaacttaaagaacgggagaaggtgcttgattcgtgcagtttccgggatgaggat
gatgactgtacgtactactacactgttgaaaaccctaaagatcccttagttaaggtcttg
gaggtccaggtgctcgaaaagaaagaatgtccccctgctagcctactgtggttgctccca
ctcttcttgttcctcttgttactgctggccctgttgctgctctgctgctggaaatactgt
gcctgctgcaaaaccctctgccagagctgtcttgccctgctgccttgctgtgggagaggt
cgtatggttggcttcaaggaagatgagtatttgctccgccagtctctgcttacctcagac
catctggacaccccaatggtaaggaccggccctcccaaaggaaccgatgtggtccgctgg
aaggtcactgataacgtacaccgatcacccaatcacccccaggctctgataaagcccaac
cctaaagagtccatccagttcccgatctccctccgactaaacaggctgttttctgagaac
ctgtctcgccccgattccagagacgcagaacagcttcgcaaggaagtggccgataacctg
aatgaggtgtacaagcagattcccggcgcccagaaagtgcaaaaaactgcattcagaatg
cagagaaatgccggaaaaaggcaggactacgccattatggacaccgtcttatccgctcct
cgcagcagctaccctgatattgtcaaactcaccgagaaaactgtccagtctggaaacgca
catgatctcaaagtggtgcccggctattacactgtggccaccgacagagaggctgcagga
gccatcgagttccaagaaggtgtggagtcagtagacgttcatgtgccgctctttgtcaag
gatgaagacgatgaaaagaagcagctgctggtggaggccatagatgtgccaatggggatt
gctgagattggaaaacgtttggtcaacatcaccatcatcaaagagcatgccaccaatatc
ttctcgttcctccagccggcctacacctacagcaggcaggacggagtggccaacattccc
attagcagagagatcatagaagatggacgcacacaggtcacctaccgcacacgggacctc
acagccaaggataagaaggactatgttgctgtggaaggagacttgagctacgctccaggt
gagacccagaaaatagtgcctgttcgtctgctggagctgggcgagaaagatggcctcctt
gaagacaaacaggtcaagcagtttgtcatggatctcagtaacccacgggaaggtgccaag
ctgggacgctacccgagaactactatcacaattgcggaccaaccagagcccagtattatg
atgttcaaaaagggcacccagaactttaccacatctgacccaacctacgttatccctgtg
gtccgcactcgcaaccaggacagtcccgcctcagtgaaatggcgcaccaagaaggcccag
cgctttgacttagccggcactttaaagtttagtcccggggagacggagaagaacatagtg
atcgacccgagggctcacaatagcccaatccagccagagaccatacaactggagctgttg
gacccaagtagcaatgcttctgttggggacagaaagaccacccttgtcaatataactgac
ggagctccagaagttgcccaggtgcagcagaagggctacacaaacctgaatctcaactca
cctggtggtcatcttccctctccaagcaaccttaaggccaaagcaactggacccagaagc
attcgcctcaactgggacccactgtctggtaacacaatggggtacaaggtaaagtattgg
atctatggcgacccagagaaagatgcccaggtcttagatgtgaagactcctcaagctgag
ttgaccaacttgtacccctattgtgattacgagatgcgagtgtgcggctacaatgcggtg
ggagatggatacgacacagacatggttgcctgtcaaacactggaggatgtgcctggtgaa
cctgggcgtcttgcctttaatgtcatcagcccgactgtcactcaggtcagctgggcagag
cctgcagagaccaatggcaacatcacggcttatgaggtcatctacacacccattgatgat
ggaaggaagccagtgggccccgctaagaaagtaaagattgacaaccccaagaagcgaatg
ctgttgatcgagaaccttcagaatgcccagacctaccagtacaaggtccgtgccatgaac
agcataggctggggccccttcaaagatgccaccataaacctggcatcccagcctgtcaga
cctctatccattcccatcattccagatatccccattgtggatgcagaggcaggagaagag
tatgacagctacctgatgtacagcaatgaggtgctgaagtcccctacaggctccaagacg
cccagcgtctctggtgatgattacatgatcaatgggaagtgggaacagaacttccttttc
ccagggggatcagcaacacgcaacttgtcagcatcatcctctcctatgtccactctgagc
tccaactacagaggggcaggcggctcctttaccacagaaacatccaccacctacatgtcc
ggagcagcaggctctcgtagacatgacatgataggaggaggagtacactcatcagaagtt
atcatgaggaagcgctcagagaacaggggttacacagatgaaaacatccgggactcaatc
gtcattggagatgtgtcaagcaagttcccagatttaggtgggttcggctacgctgggata
cagagcagctctcagagccagttcagctacaacctgtctcagggttccagggccaggatt
gagtcttcagacgtcaatgaagccctatataatctggatagggtgctcctggatgctcga
ctgtctccgggcgtaccagacacccccagcagactggtgttttctgctcttggtcccact
gccctcaaagtgagctggcaggagccccactgtgagaaagacatcctgggctactgtgtt
ctctaccagctgctcagtggaggagagatgaagcgtatcaatgtgacgaacccagcagag
aactctgttatcatccaggacctgctgcccaaccactcctatctatttaaagtgaagggt
cagagccaggagggctggggtccagagagagagggagtcatcaccatcgagtcggcagtg
gaccccaagagtcccctcagccccatgccaggctcaccatttactctgagcactcccagt
gccccgggccccctggtctttaccgctctaagccccgactccctacagctcagctgggag
aaaccccgtaaacccaacggagacatcctgggctatgtagtcacctgcgaacagctgcat
ggtggaggagacctgcgtaccttccaggtgaacggggacagtgctgagaccagtttgacc
gttccaaacctgacggagaatattccctacaagtttaaagttcaggctcgaactacacag
ggcttcggccccgagagggagggcatcatcaccattgagtctcaggatggaagcgctttg
tctcagtacaacagccaatcaacgaggagggaagttttccacatgccaacagaggtcagc
acgcggaccaacgtctcccacaccatgctcaacgacccctacttctcagcagatgggatg
atgatgaccacgcagcactcagagaccagcggcatggtgacccgtcacgtcaccaaggaa
gtggttcagaggagcgtcatgggaggaaccaccgtcacaaagaagatgttttacgaatct
taa
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integrated database retrieval system
