Etheostoma cragini (Arkansas darter): 117937393
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Entry
117937393 CDS
T07493
Symbol
trim65
Name
(RefSeq) tripartite motif-containing protein 65
KO
K12031
tripartite motif-containing protein 65
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ecra04121
]
117937393 (trim65)
Ubiquitin system [BR:
ecra04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
117937393 (trim65)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
PRY
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_4
zf-C3HC4_2
RING_XB3-XBAT31
zf-C3HC4_3
zf-RING_2
zf-RING_5
zf-B_box
zf-RING_11
Prok-RING_4
PI3K_P85_iSH2
zf-Nse
Perilipin
C5HCH
DASH_Dad4
DNA_topoisoIV
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
117937393
NCBI-ProteinID:
XP_034717235
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All DBs
Position
21:complement(19285982..19291185)
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AA seq
519 aa
AA seq
DB search
MSALPLEMDSQNSNLNCAICLDRFRIPVTIPCGHTFCQDCINLHWDTKSKSDIGPQCPMC
NEKFPTRPILKRNVSLSVLTEAVNIGPPCRESLMRGSEGARALLLCDRHKKPLVYYCRQD
KMSVCCQCAISECVDHEKGLLETERENQELLLERKIKEVGKLTEETLKSINDLAENINHA
KVTLQQTSTWVNAKFSTLIKILAEKQEATELFTEEQKEAAITEAEARLAELKKRAQKLQE
SREVIAAVLKLSDTELIKESMVLEVPYFKEIPTDVTPNLQERLNGVTDVLSRVSKLVSED
LEKAVSTVVGPDKDGSPQDKRPILAVVPSPAAPCHPGGKDGLSAYRCSLTFDPRTANGHL
CLSQENRRAEHLTTGPRPVPAHEARFDHTWQVLCFQGFKNGQHYWELEVSKPWAYLGVTY
ETIPRKEKGKRCMVGMNELSWSLQLDEHQISAWHNGRRETVVGHSQHSRIGMLLDYEAGT
LTYYGDGQTRLYAFHCAFSQELFPACWIGEGVSITLCST
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgtctgctcttcctttagagatggattctcagaattccaacctgaactgtgccatatgc
ctggaccgtttccggatccctgttaccatcccctgcggtcacaccttctgtcaagactgc
atcaaccttcactgggacaccaagagcaagtctgatatcggacctcagtgtccaatgtgc
aatgagaagtttcctaccaggcccattctcaagcgtaatgtgtccttgtcggtcttgacg
gaggctgtgaacatcggccccccctgtagagagtcccttatgaggggaagcgaaggggcg
agagccttgctgctttgtgatcgccataaaaagcctctggtttactactgcaggcaggac
aaaatgtctgtgtgctgccagtgtgcaatctctgaatgcgtggaccacgagaaggggttg
ctggagacagaaagggaaaaccaagagctgctgctggaaaggaagataaaggaggtgggg
aaactcacggaagagacgctgaaaagtataaatgacctggccgaaaacatcaatcacgcg
aaggtgactcttcagcagacttccacctgggtcaatgccaagttctccaccctgattaaa
atactggcggagaagcaggaggctacagagctcttcacagaggagcagaaagaagcggcc
atcactgaggcggaggcacggctagctgaacttaagaagcgcgcccagaaactccaagag
agccgggaagtgatagcagctgtacttaagctctctgacacagagctcatcaaggaatca
atggtcctagaggtcccctatttcaaagagattcccacggatgtaacgccaaaccttcaa
gagcgattaaacggtgtcacagatgtcctttcccgagtctccaagctggtgtctgaggac
ctagagaaagccgtgagcaccgttgtgggtccggacaaagatggttctcctcaagataag
aggccgatcctagccgtggttcccagtccagctgctccgtgccaccccggtgggaaggac
ggcctcagcgcttaccgatgctctctgacctttgaccctcgcacggccaacgggcacctg
tgtctgtcccaggagaaccggagggcagagcacctgaccaccgggccccgccccgttcca
gcccatgaagcgcgcttcgatcacacctggcaggtgctctgctttcagggcttcaaaaat
ggacagcactactgggagctggaggtgtccaagccctgggcctacctcggggtaacctac
gagaccatccccaggaaggagaagggcaaaaggtgcatggtgggtatgaacgaactgtcc
tggagcctgcaactggacgagcatcagatcagcgcctggcacaacggccgacgggagacg
gtggtcggccactcccagcacagccgcatcggcatgctgctggactacgaggccgggaca
ctcacctactacggggatgggcagaccaggctctacgccttccactgtgccttcagccag
gagctgttccccgcctgctggataggagagggggtcagcatcaccctctgctccacatga
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